| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 177,062 | 0 | C | A | 24.9% | 453.7 / 33.9 | 233 | intergenic (+235/‑37) | EO946_RS01020/EO946_RS01025 | alcohol dehydrogenase/SulP family inorganic anion transporter |
| Reads supporting (aligned to +/- strand): ref base C (77/98); new base A (58/0); total (135/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 233 total aligned reads displayed.
GATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTGAAGCAATT > NZ_CP034943/176925‑177200 | gATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACgg < 1:1765818/140‑1 (MQ=255) aaTTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGAGTCCTCTTTTTCTCCGGTCTTGTTGGTTTGATTTATTCCGTAAAATAAATAAAACTCACCCAACAACAAATAAgggtgggt > 1:119518/1‑134 (MQ=255) gATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTACCACTACAACAAAAAAGGTGGGGATTTAtttttt > 2:4055520/1‑140 (MQ=255) aTACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAACCTCCCAATACAACAAATAAGGGGCGGATTTATTTTTTa > 2:3252157/1‑140 (MQ=255) aTACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTAATTTCTCCCGTAAAATAAAGAAAGCTCCCAATAAAACAAATACCGTGCGGCTTTATTTTTTa > 2:1845153/1‑140 (MQ=255) aTACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTAATTTCTCCCGTAAAATAAATAAATCTCCCAATAAAAAAAAAACGGTGCGGATTTATTTTTTa > 2:2593819/1‑140 (MQ=255) ctTTGTATAATAACTCCTTGCCTAAAATAAACATCCTCACCGTTTCCTCTTTTTCTCCGCTCGTTTTCCTTTCATTTCTCCCGTAATATAAAGAAATCTCCCAATACAACACATCCGGTGCGGATTTATTTTTTAAAAAg < 1:2421406/140‑1 (MQ=255) tttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTATCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAAACGGGGCGGATTTATTTTTTAAAAAgg > 2:4512398/1‑140 (MQ=255) tttGTATAATAACTCCTTGCCGCAAAACAACATACTCAACGTGTCCTCTTGTTCTCCGGTCGTTTTGCTGTCATTTGTCCCGGTAAAAAAAGGACTGTGCCCATAACACACCTACGGTGCGGCTTTATTTTTTaaaaatg > 1:2127789/1‑138 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAAAAAATAAGGTGCGGAGTTATTTTTTAAAAAGGAg > 2:2846746/1‑140 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCGGTCATTTCTACCGTAAAATTAAGAAAGCGCCCAAAACAACAAATACCGAGGGGCATTATTTTTTAAAAATGAg > 2:2768952/1‑140 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTCTCCCGTAAAAAAAATAAAGCTCCCAATACAACAAATAAGGTGCGGATTTATTTTTTAAAAAGTAg > 2:864963/1‑140 (MQ=255) gTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTCTCCCGTAAAATAAAGAAAGCTACCAATACAAAAAATACGGTGCGGATATATTTTTTAAAAATGAGt > 2:1249877/1‑140 (MQ=255) tataATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGAATTGTCCCGTAAAATAAAGAAAGCTGCCAAAACAACAAATACGGTGCGGATTTATTTTTTaaaaatgtgtg > 1:3467011/1‑134 (MQ=255) ataataACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTGATTTATCCCGTAAAATAAAAAAAGCTCCCAAAAAAAAAAAAACGGTGCGGGTTTATTTTTTAAAAATGAGtgg > 1:3251978/1‑138 (MQ=255) taataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAGACGGTGCGGATTTATTTTTTAAAAAGGAGTCGt < 1:4090746/140‑1 (MQ=255) taataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGt < 1:3024932/140‑1 (MQ=255) ataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTGATTTGTCCCGTAAAATAAAGAAAGCTCCCAATAAAACAAAAAAGGGGCGGCTTTATTTTTTAAAAATGAGTGGttt > 1:559130/1‑139 (MQ=255) ataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTCATTTGTGCCGTAAAATAAACAAACCGCCCCATACAAAAAAAACGGGGGGGGTTTATTTTTTAAAAATGAGTCggtt > 1:330062/1‑137 (MQ=255) taaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTTCGTTGATTTGTCCCCGAAAATAAATAAAACTACCAAAACAACAAAAAAGGTGCGGGTTTTTTTTTTAAAAATGAGTGGtttt > 1:2946953/1‑138 (MQ=255) taaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTATCCCGTAAAATAAACAAAACTCCCAATAAAACAAATACGGTGCGGATTTATTTTTTAAACATGAGGGGTta‑t > 2:4195882/1‑140 (MQ=255) taaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTCTCCCCTAAAATAAAGAAAGCTACCAATAAAACAAATAACGTGCGGATTTATTTTTTAAAAAGGATTCttttt > 2:2821993/1‑138 (MQ=255) aaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTAATTTTTACCCTAAAAAAAAAAAAGCACCCAAAAAAAAAAAAAACGTGGGGATTTATTTTTTTAAAAAGTGTGGTtt‑ta > 1:721827/1‑140 (MQ=255) aaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCGTTAATTTCTACCGTAAAAAAAATAAAACTCCCAAAACAACAAATACGGTTGGGGTTTATTTTTTTAAAAGGATTCGTta‑ta > 2:1998441/1‑140 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTa‑tat < 2:1348187/140‑1 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTa‑tat < 1:2060664/140‑1 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCGTTTCATTTATCCCCTAAAATAAAGAAAGCTCCCCAAACAACAAATACGGGGCGGCTTTATTTTTTAAAAAGGAGTGGTTA‑GAtt > 2:3889218/1‑140 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACACATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TAtt < 2:1205776/140‑1 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTATCCCGTAAAATAAAGAAAGCTCCCAATACAAAAAATAAGGTGCGGATTTATTTTTTAAAAATGAGTCGTTA‑TAtt > 2:2364905/1‑140 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTAATTTCTACCGTAAAAAAAAGAAAGCTCCCAATACAAAAAATAAGGTGCGGATTTATTTTTTAAAAATGAGTCGGTA‑TAtt > 2:627093/1‑140 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACGTTCATTTATCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAAACGGGGCGGATTTATTTTTTAAAAAGGAGGCGTTA‑TAtt > 2:949368/1‑140 (MQ=255) cTCCTTGCCTCAAAAAAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTGATTTAACCCCTAAAAAAAAGAAATCTCCCAAAAAAACAAAAAACTTGGGGCATTTTTTTTTGAAAATGATTCGtttaatt > 1:681814/1‑135 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTTCTTTGATTTCTACCGTTAAATAAAGAAAGATACCAAAAAAAAAAAAAAGGGGCGGGTTTATTTTTTAAAAATGATTGGTGT‑TAtttt > 1:2174280/1‑139 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTGTCCCGTAAAATAAAGAAAGCTCCCCATACAACAAATACGGTGCGGGTTTATTTTTTTAAAATGAGTCGTTG‑TTTTTg > 2:4005684/1‑140 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTGATTTATCCCGTAAAATAAAGAAAGCTCCCAATACAAAAAAAACCGTGCGGCTTTATTTTTTAAAAATGAGTGGTTT‑TATTTg > 2:4126934/1‑140 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCACCCCTAAAATAAAGAAAGCTCCCAAAACAAAAAAAACGGTGCGGAATTAATTTTTAAAAAGGAGGCGGTA‑TATTTg > 2:1079814/1‑140 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTATCCCGTAAAATAAAGAAAGCTCCCAATAAAACAAATACGGTGCGGATTTATTTTTTAAAAAGGATTCGTTA‑TAtttt > 2:2978642/1‑139 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTTATTTGTCCCGGAAAATAAATAAAACGCCCCAAACAAAAAATAAGGGGGGGGGTTTTTTTTTTAAAAGGAGTGGTTT‑TAtttt > 1:343800/1‑139 (MQ=255) ccTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGaataa < 1:1354051/140‑1 (MQ=255) aaaaCAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCACAAAAAAACAAATAATGTGCGGATTTATTTTTTAAAAATGAGTGGTTA‑TAATTTAataatatt > 2:3530546/1‑138 (MQ=255) aaaaCAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTa‑tat > 2:1166574/1‑128 (MQ=255) aaaaCAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTACTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCCAAACAAAAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTTAATAAAA‑Gt > 2:735550/1‑140 (MQ=255) gagacagtACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGACAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑Gttt < 1:1491119/133‑1 (MQ=255) aacaacATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑Gttt < 2:1088132/140‑1 (MQ=255) cctACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATACAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACAt < 1:458295/138‑1 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTGATTTTTGCCGTAAAATAAAGAAAGCTCCCAATAAAAAAAATAAGGTGCGGATTTATTTTTTTAAAAGGAGTCGTTT‑TTTTTTTATAATA‑Atttttgat > 2:1815683/1‑136 (MQ=255) aCTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGGGTCGTTA‑TATTTTTATAATA‑GTTTTACATTaa > 2:545157/1‑140 (MQ=255) aCTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTaa < 1:3971866/140‑1 (MQ=255) tCAACGTTTCCTCTTTTTCTCCGGTAGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAag < 2:1012592/140‑1 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAag < 1:984309/140‑1 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTAATTTATGCCGTAAAATAAATAAATCTCCCAATAAAAAAAATAAGGTTCGGATTTATTTTTTAAAAATGAGTGGTTATTATTTAAAT‑ATA‑TTTTTAAAATaaaaaa > 2:795102/1‑137 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTAATTTGTCCCGTAAAATAAATAAATCTGCCCATAAAAAAAAGAAGGTTGGGGTTTTTTTTTTTAAAATGGGTGGGTG‑TTTTTTGATAATA‑TTTTTTAATTaaaaga > 1:1417677/1‑137 (MQ=255) aCGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTGTCCCCTAAAATAAATAAAGCTCCAAATAAAACAAAAAAGGGGCGGAGTTATTTTTTTAAAATGAGTCGTTA‑TATTTGTATAATA‑GTTTTTCATTAAagcat > 2:2435564/1‑139 (MQ=255) aCGTGTCCTCTTTTTCTCCGGTCGTGTTGGTTTGATTTGTCCCGGAAAATAAATAAATCTCCCAAAACAACAAAAAAGGGGGGGGGTTATTTTTTTAAAAGGCGTGGGTT‑TATTTTTTTAATA‑TTTTTAAAATaaaagag > 1:4679002/1‑136 (MQ=255) cGTGTCCTCTTTTTCTCCGGTCGTTTTTCTGTGATTTGTGCCGTAAAAAAAATAAAGCTCCCAAAAAAACAAAAACGGTGGGGAGTTTTTTTTTTAAAAGGAGGGGTGT‑TATTTTTATAAAATGTTTTTAATTaaaaaac > 1:2829629/1‑136 (MQ=255) cGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTCTCCCGTAAAATAAAGAAATCTCCCAATACAACAAATAAGGTGCGGATTTATTTTTTAAAAAGGAGTAGTTT‑TATTTGTATAATA‑TTTTTAAAATAAaacagc > 2:1537730/1‑140 (MQ=255) cGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTGATTTCTCCCGTAAAATAAAGAAAGCTCCCAATAAAAAAAATAAGGTGGGGATTTATTTTTTAAAAAGGAGTGGTTT‑TTTTTGTATAATA‑GTTTTTAATTaaatgagc > 2:2008008/1‑135 (MQ=255) cGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAagcagc < 2:3737008/140‑1 (MQ=255) cGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATAAGGTGCGGATTTATTTTTTAAAAATGAGTCGTTA‑TATTTGAATAATA‑TTTTTAAATTAAagaatc > 2:3306224/1‑136 (MQ=255) cGTGTCCTCTTTTTCTCCGCTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCAAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAagcagc < 1:4564340/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACCACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 1:897404/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 1:658267/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 1:1137145/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 2:1405952/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCAGTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 2:4679002/140‑1 (MQ=255) tgtCCTCCTTTGCTCCGGTCGTTTTCCTGTCAGTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAACTACGGTGCGGATTTATTTTTTAAAAACGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 2:3703323/140‑1 (MQ=255) gtCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTCTCCCGTAAAAAAAACAAAGCACCCAATACAAAAAAAACGGGGCGGATTTATTTTTTTAAAAGGATTGGGTA‑TATTTGAATAATA‑ATTTTAGATTAAATCAGCAAt > 2:1379235/1‑140 (MQ=255) gtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAAt < 1:2978642/140‑1 (MQ=255) gtCCTCTTTTTCTCCGGTCGTTTTCCTTTAATTTCTCCCGGAAAATAAAGAAAGCTCCCAAAACAACAAATACCGTGCCGCTTTTTTTTTTAAAAAGGATTAGTTA‑TATTTTAATAATA‑TTTTTAAAATAAAGCAGCaaa > 2:4306041/1‑139 (MQ=255) gtCCTCTTTTTCTCAGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAAt < 1:1079814/140‑1 (MQ=255) tCCTCTTTTTCTCCGGTCGTGTTTCTTTGATTTCTACCGTAAAAAAAAGAAATCTGCCAAAAAAAAAAATAAGGTGGGGGTTTATTTTTTAAAAAGGAGTGGTTA‑TTGTTTTATAATA‑TGTTTAAAATAAAGCAGCaaag > 2:1641279/1‑138 (MQ=255) tCCTCTTTTTCTCCGGTCGTGTTGCGTTGAATTATGCCGTAAAAAAAAAAAAACGCCCCAAAAAAAAAAAAAGGGGCGGCTTTTTTTTTTAAAAAAGAGTGGTTT‑TATTTTAATAAAA‑ATTTTTAAATAAATcaacaaag > 1:1570762/1‑138 (MQ=255) ttttCTCCGGTCGTTTTCCATTAATTTGACCCGTAAAAAAAAGAAACCTCCCAATAAAAAAAATACCGTGCGGCTTTATTTTTTAAAAAGGAGGCGTTA‑TATTTGTATAATA‑GTTTTAAAATAAACAAGCAAATGTTCgg > 2:2147686/1‑140 (MQ=255) tCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGa < 2:946142/140‑1 (MQ=255) ttCTCCCGTAAAATAAAGAAAGCTCCCAATACAACACATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCt < 1:3189183/140‑1 (MQ=255) ctcCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTgg < 2:3109528/140‑1 (MQ=255) tAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCAtttt > 2:3688411/1‑140 (MQ=255) aaaTAAAGAAAGCTCCCAATACAACAACTACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAg < 2:2103977/140‑1 (MQ=255) aaaTAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAg < 1:1659899/140‑1 (MQ=255) aTAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGtt < 2:343591/140‑1 (MQ=255) aagaaagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTATTGGTGGGATTTTAGTTGCg > 2:3871444/1‑140 (MQ=255) agaaagCTCCCACTACACCAACTACGGTGCGGATTTATTATTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGt < 1:2435564/140‑1 (MQ=255) gaaagCTCCCACTACAACAACGACGGTGCGGATTTATTTTTTAAACAGGAGTCGTTA‑TATTTGAATAATA‑GATTTACAATAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 1:1998441/140‑1 (MQ=255) gaaagCTCCCAATACAACACATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 1:3513333/140‑1 (MQ=255) gaaagCTCCCAATACAACAACTACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 1:1845153/140‑1 (MQ=255) gaaagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 1:2593308/140‑1 (MQ=255) gaaagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 2:1714847/140‑1 (MQ=255) cTCCCAACACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCAt > 1:4357116/1‑140 (MQ=255) tCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTATCAtt > 2:721534/1‑140 (MQ=255) tCCCAATACAACAAAGACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GATTTACATTAAAGCAGCAATGGTTCGGGAAGATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCAtt < 2:2286316/140‑1 (MQ=255) cccAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTa < 1:4174373/140‑1 (MQ=255) caacacATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTg < 1:969999/140‑1 (MQ=255) caacaaATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTg < 2:3802310/140‑1 (MQ=255) caacaaATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTg < 1:2227189/140‑1 (MQ=255) caacaaATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTg < 1:1258698/140‑1 (MQ=255) aacaaATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTGa > 2:3622146/1‑140 (MQ=255) acaaATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAATCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGGATTTTAGTTGCGTTAGCATTAATACCTGaa > 1:2354526/1‑140 (MQ=255) aTACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTAGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTTCGTTAGCATTAATACCTGAAGCaa > 2:1598240/1‑140 (MQ=255) aTACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAAGGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATGTTAGTTGCGTTAGCATTAATACCTGAAGCaa > 1:274115/1‑140 (MQ=255) aTACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTGA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTGAAGCaa > 1:538925/1‑140 (MQ=255) | GATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTA‑TATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTGAAGCAATT > NZ_CP034943/176925‑177200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |