Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP034943 44,865 T→A intergenic (‑46/‑455) abrB ← / → metG transition state genes transcriptional regulator AbrB/methionine‑‑tRNA ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP03494344,8650TA99.6% 890.9 / ‑4.0 228intergenic (‑46/‑455)abrB/metGtransition state genes transcriptional regulator AbrB/methionine‑‑tRNA ligase
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (113/114);  total (114/114)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 234 total aligned reads displayed.

TCTGCGATTCCAAGAGTACGACGCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTTTCTTCGTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTAATGTATCAGAAACTACTGAAATAA  >  NZ_CP034943/44731‑45000
                                                                                                                                      |                                                                                                                                        
  tGCTATTCCAAGAGTACGACGAAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTATATTTCATAAACTTTCTCCTCACAAGAGATGATTATTTGTTTAAATTATATTTatctttct                                                                                                                                   <  1:3021782/140‑4 (MQ=255)
    cGATTCCAAGAGTACGACGCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTatctttctca                                                                                                                                 <  2:1686798/140‑6 (MQ=255)
    cGATTCCAAGAGTACGACGCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTatctttctca                                                                                                                                 >  1:2089716/1‑135 (MQ=255)
                    acgCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATcc                                                                                                                >  1:1819898/1‑140 (MQ=255)
                     cgCAATTCGATAGGAATAACTACACGTCCTATCTCATCAACTTTACGTACAATAACAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCt                                                                                                               <  2:3930301/140‑1 (MQ=255)
                     cgCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCt                                                                                                               >  2:3602064/1‑140 (MQ=255)
                     cgCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCt                                                                                                               <  2:3256951/140‑1 (MQ=255)
                     cgCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCt                                                                                                               >  1:3285929/1‑140 (MQ=255)
                      gCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCtt                                                                                                              <  1:4191504/140‑1 (MQ=255)
                        caTTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCCGTAGATTTCATAAACTTTCTCCTCGCAAGAGAGGATTATGTGTTTAAATTATATTTTTCTTCGTCATTATTCGAC‑AAAATCCTTAc                                                                                                            >  1:682359/2‑140 (MQ=255)
                        aaTTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTAc                                                                                                            >  1:1476100/1‑140 (MQ=255)
                        aaTTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTAc                                                                                                            >  2:3733785/1‑140 (MQ=255)
                        aaTTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTAc                                                                                                            >  2:1019555/1‑140 (MQ=255)
                        aaTTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTAc                                                                                                            >  1:3825187/1‑140 (MQ=255)
                           tCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCtt                                                                                                         <  2:1109936/140‑1 (MQ=255)
                           tCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCtt                                                                                                         <  1:1019555/140‑1 (MQ=255)
                             gATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCa                                                                                                       <  2:1891023/140‑1 (MQ=255)
                             gATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCa                                                                                                       <  2:3402878/140‑1 (MQ=255)
                             gATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCa                                                                                                       <  2:694162/140‑1 (MQ=255)
                               tAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATCTTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATa                                                                                                     >  2:4013804/1‑140 (MQ=255)
                               tAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATc                                                                                                                 <  2:3828188/128‑1 (MQ=255)
                               tAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATa                                                                                                     <  1:533397/140‑1 (MQ=255)
                               tAGGAATAACTACACGTCCTAGATCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATa                                                                                                     <  2:3967846/140‑1 (MQ=255)
                                aGGAATAACTACACGTACTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAg                                                                                                    <  1:849986/140‑1 (MQ=255)
                                       aCTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACa                                                                                             >  1:2067507/1‑140 (MQ=255)
                                       aCTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACa                                                                                             >  2:76873/1‑140 (MQ=255)
                                       aCTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACa                                                                                             <  1:3733785/140‑1 (MQ=255)
                                       aCTACACGTCCTAGCTCATCAACTTTACGTACAACACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCt                                                                                                               <  1:1217739/122‑1 (MQ=255)
                                         tACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAg                                                                                           <  2:197025/140‑1 (MQ=255)
                                            acGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGtt                                                                                        >  1:2851616/1‑140 (MQ=255)
                                             cGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGttt                                                                                       >  1:2664546/1‑140 (MQ=255)
                                             cGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGttt                                                                                       >  1:703577/1‑140 (MQ=255)
                                             cGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGttt                                                                                       >  1:3424568/1‑140 (MQ=255)
                                             cGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGttt                                                                                       >  2:3250977/1‑140 (MQ=255)
                                             cGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGttt                                                                                       >  2:2263658/1‑140 (MQ=255)
                                                   aGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACa                                                                                             >  1:1440316/1‑128 (MQ=255)
                                                   aGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCaata                                                                                 >  2:1421142/1‑140 (MQ=255)
                                                   aGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCaata                                                                                 >  1:3245218/1‑140 (MQ=255)
                                                   aGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCaata                                                                                 >  1:1997986/1‑140 (MQ=255)
                                                   aGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCaata                                                                                 >  1:377836/1‑140 (MQ=255)
                                                        atcaACTTTACTAACAAAAAAATTAAATATAAAAAACTTTCTCCTCCCAAGATATGATTATTTGTTTAAATTATAAATATATTTATAATTATTAGAA‑AAAATAATTAAATTAATATCATAAAAATGTTTAAAATAATctt                                                                            >  2:3796168/1‑138 (MQ=255)
                                                        atcaACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGt                                                                            >  2:4148586/1‑140 (MQ=255)
                                                         tcaACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCa                                                                                                       <  1:3844090/112‑1 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTatctttct                                                                                                                                   <  1:3879026/84‑4 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑ACAATCATTTCCTTCATAGCATAACAGGGTTTCCAATAATCGTCa                                                                          >  1:2716081/1‑140 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAg                                                                                           <  1:3996317/123‑1 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCa                                                                          >  2:4058580/1‑140 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCa                                                                          >  2:755843/1‑140 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCa                                                                          >  2:454370/1‑140 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCa                                                                          >  2:353723/1‑140 (MQ=255)
                                                          caACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCa                                                                          >  2:2396628/1‑140 (MQ=255)
                                                                tACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCAtt                                                                    >  2:1753048/1‑140 (MQ=255)
                                                                tACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCAtt                                                                    >  1:986992/1‑140 (MQ=255)
                                                                        aTACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGc                                                            >  1:1534499/1‑140 (MQ=255)
                                                                              gTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattga                                                      >  1:2298095/1‑140 (MQ=255)
                                                                              gTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattga                                                      <  1:1737881/140‑1 (MQ=255)
                                                                              gTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTa                                                          <  2:3612621/136‑1 (MQ=255)
                                                                              gTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTa                                                          >  1:3612621/1‑136 (MQ=255)
                                                                                aGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattgatt                                                    <  2:3998174/140‑1 (MQ=255)
                                                                                aGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattgatt                                                    <  2:3864152/140‑1 (MQ=255)
                                                                                 gATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattgattg                                                   >  1:4399913/1‑140 (MQ=255)
                                                                                 gATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattgattg                                                   >  1:2406670/1‑140 (MQ=255)
                                                                                 gATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattgattg                                                   >  1:4448676/1‑140 (MQ=255)
                                                                                   tttCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTa                                                 <  1:4226933/140‑1 (MQ=255)
                                                                                   tttCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTa                                                 <  1:94311/140‑1 (MQ=255)
                                                                                   tttCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTa                                                 <  2:1534499/140‑1 (MQ=255)
                                                                                   tttCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTa                                                 <  2:1085438/140‑1 (MQ=255)
                                                                                    ttCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGACAAAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTa                                                 >  1:356440/1‑140 (MQ=255)
                                                                                    ttCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTaa                                                >  1:2579757/1‑140 (MQ=255)
                                                                                    ttCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTACAATAATCGTCAATCATTTTGTTTGCTATTGATTTTaa                                                >  1:2953954/1‑140 (MQ=255)
                                                                                         aaaCTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAAtt                                           <  2:3117171/140‑1 (MQ=255)
                                                                                          aaCTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTa                                          <  1:4013741/140‑1 (MQ=255)
                                                                                           aCTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAg                                         <  1:4058580/140‑1 (MQ=255)
                                                                                           aCTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAg                                         <  1:1659562/140‑1 (MQ=255)
                                                                                               tctcCTCCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCt                                     >  1:3927730/1‑140 (MQ=255)
                                                                                                ctcctcCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCtt                                    <  2:952078/140‑1 (MQ=255)
                                                                                                ctcctcCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCtt                                    <  2:2196608/140‑1 (MQ=255)
                                                                                                ctcctcCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCtt                                    <  2:1650150/140‑1 (MQ=255)
                                                                                                ctcctcCCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCtt                                    <  2:1459295/140‑1 (MQ=255)
                                                                                                 tcctccAAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTta                                   <  2:2634959/140‑1 (MQ=255)
                                                                                                   ctccCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTtata                                 <  2:3290523/140‑1 (MQ=255)
                                                                                                   ctccCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTtata                                 <  2:271320/140‑1 (MQ=255)
                                                                                                   ctccCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTtata                                 <  2:248902/140‑1 (MQ=255)
                                                                                                   ctccCAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTtata                                 <  2:4399913/140‑1 (MQ=255)
                                                                                                     cccAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGt                               <  2:1613301/140‑1 (MQ=255)
                                                                                                     cccAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGt                               <  1:454370/140‑1 (MQ=255)
                                                                                                     cccAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGt                               <  2:4448676/140‑1 (MQ=255)
                                                                                                     cccAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGt                               <  2:427500/140‑1 (MQ=255)
                                                                                                     cccAAGAGATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGt                               <  2:2067507/140‑1 (MQ=255)
                                                                                                         agagATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGt                           >  1:2255576/1‑140 (MQ=255)
                                                                                                         agagATGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGt                           <  2:4334917/140‑1 (MQ=255)
                                                                                                          gagaTGATTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTa                          <  2:2953954/140‑1 (MQ=255)
                                                                                                            gatgatTATTTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTAAt                        <  2:581139/140‑1 (MQ=255)
                                                                                                                attattTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAg                                <  1:1044571/128‑1 (MQ=255)
                                                                                                                attattTGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAg                                >  2:1044571/1‑128 (MQ=255)
                                                                                                                    tttGTTTAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTAATGTATCAGa                <  1:3107590/140‑1 (MQ=255)
                                                                                                                          tAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTattga                                                      >  1:3255365/1‑96 (MQ=255)
                                                                                                                          tAAATTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTAATGTATCAGAAactaa          >  2:2817638/1‑139 (MQ=255)
                                                                                                                           aaaTTATATTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTAATGTATCAGAAactact         <  2:1234820/140‑1 (MQ=255)
                                                                                                                                  atTTATCTTTCTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTAATGTATCAGAAACTACTGAAATaa  >  2:940755/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                        
TCTGCGATTCCAAGAGTACGACGCAATTCGATAGGAATAACTACACGTCCTAGCTCATCAACTTTACGTACAATACCAGTAGATTTCATAAACTTTCTCCTCCCAAGAGATGATTATTTGTTTAAATTATATTTTTCTTCGTCATTATTCGAC‑AAAATCCTTACCTTCATAGCATAACAAGGTTTCCAATAATCGTCAATCATTTTGTTTGCTATTGATTGTAAGAATTAGTTCTTATAGTCAGTAATGTATCAGAAACTACTGAAATAA  >  NZ_CP034943/44731‑45000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑