| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 634,089 | C→A | 5.0% | R561L (CGT→CTT) | EO946_RS03330 ← | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 634,089 | 0 | C | A | 5.0% | 1063.5 / 3.9 | 417 | R561L (CGT→CTT) | EO946_RS03330 | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (101/274); new base A (38/2); total (141/276) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.14e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 419 total aligned reads displayed.
TAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCTATAT > NZ_CP034943/633951‑634218 | tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTTCATTGTTTTTGTTATTGATA‑TGTACGtttt > 1:3364690/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTGTTTTTTCATTGTTTTTTTTGTTGATA‑TTTACGgttt > 1:6789929/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTATTTGTTTTTGCATTATTTTTATTCTTGATA‑TTAACGtttt > 1:7355316/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCAGTCTTTTTCTTATTCATA‑TGAAAGtttt > 2:3986749/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGCTTTTTTTTTACAAAGATTTTCTTGTTGATA‑TGAACAtttt > 1:2140380/1‑140 (MQ=255) ccGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAg < 2:1116518/140‑1 (MQ=255) cGGATCAGATAGCAATTCATCGTTATGACTAATGTTTTCTTCAAGGGTTTGAACAGGGGCTTCAATTTCTTCACTCCGCCGGAGACGTTGGCGTTCTTTCTTTTTCCATTCATTTTCTTCTTCATA‑TGAACGTTTTGAGt < 2:6602686/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGt < 2:5745011/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGt < 1:5771635/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGt < 2:1303678/140‑1 (MQ=255) cGGATCACATAGAAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGt < 2:6113307/140‑1 (MQ=255) tAGCAATTCATCGTTATGACTAATGTTTTCTTCACTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTaa < 2:6664200/140‑1 (MQ=255) gaGCACTTCATAGTTATGACGAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCGTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGCACGTTTTGAGTCAGGCTTaa < 2:6456345/139‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAAc < 1:7075673/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCGTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCGTCATA‑TGAACGTTTTGAGTCAGGCTTAAc < 2:3359709/140‑1 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTGCATTGTTTTTGTTGTTCATA‑TTTACGGTTTGATTGAGGGTTATACGGAGCa > 2:7392948/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTGTTTTTGGAGTGTTTTTTTTGTTGATT‑TTGACGGTTTTTGTTAGGCGTAACCgcagca > 1:392389/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCGTGTTGGATTCTTTTTATTGTTGAGA‑TGGACGTTTTGTGTGAGGGTTAAACGAAGCa > 2:4249115/1‑140 (MQ=255) cATCGTTATGACTAATGTTATCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCACTCCGACGGAGGCGTGGGGGTTCGTTCTGTTTGCCATCTTTTTGGACTGCATA‑TGAACGTTTTGACTCAGGCTGAACAGACGCa > 2:4684883/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAg > 2:3538420/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGGTGTTTGTTTTTACAATATTTTTAGTCTTAATA‑GGTACGTTTTGAGTACGGCTTAACCGAATCAg > 2:1509646/1‑140 (MQ=255) tCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAgg < 2:4148285/140‑1 (MQ=255) ggtATGACGAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCGTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCg < 2:5140134/138‑1 (MQ=255) ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTGGTTTATTTTTGCATTATTTTTGTTGTTCATA‑TTAACGGTTTGAGTCCGGGGTAACCGCAGCAGGcct > 1:855786/1‑138 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGCGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 1:7469589/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 2:2478121/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCATGTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 1:2445969/140‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt < 2:5651787/140‑1 (MQ=255) ggTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt < 1:6388914/139‑1 (MQ=255) tgttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGATTAACCGAAGCAGGCGTTTTTTCGGATTc < 1:4104417/138‑1 (MQ=255) ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTAGTTTTCCATTCTTTTTGTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTTAACGAAGCAGGGGTTTTTTGGGAttaca > 2:569435/1‑137 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGCCATATTTTTTTTGTTCATATTTAACG‑ATTGTGTAAGGCTTTAAAGAAACACGCGGTTTTTTGGGTTGctc > 1:6168980/1‑140 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCTTTATTGTTCCATTCTTTTTGGTGTTCATA‑TTAACGTTTTGAGTCAGGCTTAAACGAACCAGGCGTTTTTTCGGATTGCTCTTGCTGATTCAt > 2:293863/1‑140 (MQ=255) gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCAtt < 1:2537756/140‑1 (MQ=255) aaCAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCATTATTTTTATTCTTAATA‑TGAAAGTTTTTATTGAGGCGTAAACGAATCAGGCGTTTTTTCTGATTACTCTTTGGGATTAAttt > 2:2192578/1‑140 (MQ=255) aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 2:916668/140‑1 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGGTCTTTGTTTTTCCATGCTTTTTTTTGTTGATG‑TGGGGGTTTTGTGTGGGGCGTTACCGACGCGGGGGTTTTTTCGGCTTGCGCTTGCGGGTTCGttttgggg > 2:6337533/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTATTTTTGCATTGTTTTTCTTCTTGATA‑TGTAAGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGCTTGCTTTTCTcc > 2:5886288/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTTTTTTTGTTGTTGATA‑TGAAACTTTTTTGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTGCTCTTGGGTATTGAttttatac > 2:1991978/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTGAGGCTTAACCGAAGCAAGCGATTTTTAGAATAACTCATGATGATTAAATTtctaa > 2:7166494/1‑138 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTCTTTTTACAATCTTTTTATTCTTCATA‑TGTACGTTTTGAGTCAGGCTTAACCCAAGAAGGCGGTTTTTCGGATTGATCTTGCTGCTTGATTTGCTcc > 2:4437451/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGGTTTGTTTTTGCATTGTTTTTGTTGTTAATA‑TTTACGTTTTGTGTCAGGCTTAACCGAAGCAGGCGTTTTTTAGGATTGCTCTTGGTGATTGATTTTCTcc > 2:3474369/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGCATTCTTTTTATTGTTCATA‑TTAACGTTTTGTGTCAGGCATTACCCAACCACGCGGTTTTTGGGGTTGCGCTTTCTGTTTGAttttgtgc > 1:7564054/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTCTTTCGTTTTACAGTATTTTTGATCTTGAGA‑TGAACCTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTAGGATTACTCTTTGTGAGTCATTTtcggc > 2:6271666/1‑137 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCCGTCATTATTTTTGCCTTGGTTTTAATCTTCAAA‑TGCACCTTTTTATTAAACCTTAAACCAACGACGGCTTTTTTGGGATTGCTAGTGCTGGTTCAttttagga > 2:3046157/1‑136 (MQ=255) aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg < 2:7217541/140‑1 (MQ=255) aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg < 1:5428298/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:3674128/140‑1 (MQ=255) tCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTTTGTTGTTCATA‑TGAACGTTTTGTGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGAGTCCGCTTGCTGGTTCATTTTATGCAATTCAAGCTGCGCTGtt > 2:5246115/1‑140 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:3240617/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:6096514/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTACCCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:4561245/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGCTTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:2619421/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 1:5592624/140‑1 (MQ=255) cgTCGTTGGCGTTCTTTAGATTCCCATTCTTGTTCTACTTCAAA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCACCCTGCTCTGTTTTTTtctc < 2:5514775/139‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 2:163832/140‑1 (MQ=255) ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa < 1:4964862/140‑1 (MQ=255) ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa < 2:3576088/140‑1 (MQ=255) tctttcttTTTCCATTCTTTTTCTTATTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAACCAGGCGTTTTTTAGGATTACTCTTGCTGTTTCATTTTATCCAAATAAATCTGCTATGTTTTTTTATACGTATaaaaata > 1:3685978/1‑139 (MQ=255) tctttTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa > 2:2712604/1‑139 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 1:1568126/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:4047168/140‑1 (MQ=255) ctttTTACATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:4920833/140‑1 (MQ=255) tCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc < 2:5593963/140‑1 (MQ=255) aTTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 2:3171400/140‑1 (MQ=255) aTTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 2:5464923/140‑1 (MQ=255) aTTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 1:4835557/140‑1 (MQ=255) aTTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTATCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 2:2295300/140‑1 (MQ=255) tgtttttCTTATTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGGAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAATCTGCTCTGTTTTTTTATCCGTATAATAATCGTAATCTCAGAGATa < 2:7577506/138‑1 (MQ=255) tCTTTTTCTTCTTCCTA‑TGAACGTTTTGAGTCAGGCTGAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:5291920/140‑1 (MQ=255) tCTTTTTCTTCTTCATC‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:2078167/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:5063908/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:3552206/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:3494425/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:4676332/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:3538420/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:6734065/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:3783335/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:4588668/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:3001600/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:2531406/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:5859261/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:5924953/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:726074/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCGCCCAGATa < 2:1447516/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAGTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTACTCTCCCAGATa < 1:1021009/140‑1 (MQ=255) tCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATGCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:5390616/140‑1 (MQ=255) tCTTTTTCGTCGTCATA‑GGAACGTTTGGCGTCAGGCTTACCCGAAGCAGGCGTTTGTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:7687439/140‑1 (MQ=255) tttttCTTCTTCATC‑TGAAAGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:2899877/140‑1 (MQ=255) tttttCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGACGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:7038622/140‑1 (MQ=255) tttttCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:2850875/140‑1 (MQ=255) tttttCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:4028739/140‑1 (MQ=255) tttttCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:1991978/140‑1 (MQ=255) tttttCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:571669/140‑1 (MQ=255) tttttCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:1105423/140‑1 (MQ=255) ctgttcttctgcATC‑TGAACGTTGTGAGTCAGGCGTAACCGAAGCAGGCGTGTTTTCGGAGTCCGCTGGCTGATTCATTTTCTCCAATGCAAGCTTCTCTGTTTTTTGCTCCGTATAATCATCGTACTCTCCCAGATAct < 2:3915858/137‑1 (MQ=255) tcttcATA‑TGAACGTTTTGAGTCAGGCTTAACCGACGCATGCGTTTTTTCGGATGCCTCTTGCTGATTCTTTTTCTCCAATTCAACCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtat < 1:4240773/140‑1 (MQ=255) tcttcATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtat < 1:1495798/140‑1 (MQ=255) tcttcATA‑AGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtat < 2:6919664/140‑1 (MQ=255) cttcATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtata < 1:4465380/140‑1 (MQ=255) | TAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATA‑TGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCTATAT > NZ_CP034943/633951‑634218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |