| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,111,684 | G→T | 8.0% | M593I (ATG→ATT) | addB → | helicase‑exonuclease AddAB subunit AddB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,111,684 | 0 | G | T | 8.0% | 1057.7 / 25.7 | 371 | M593I (ATG→ATT) | addB | helicase‑exonuclease AddAB subunit AddB |
| Reads supporting (aligned to +/- strand): ref base G (107/225); new base T (33/2); total (144/227) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.17e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 374 total aligned reads displayed.
TACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGATTGAGCT > NZ_CP034943/1111545‑1111821 | ttGAGGAGTTTGTTGAAGAGTTGGCGGATGCTGAGATTTCTCTTGATTTGGTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTCCCTTTTATCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:5702107/140‑1 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:1198361/140‑1 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:5475090/140‑1 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:4038094/140‑1 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:6384061/140‑1 (MQ=255) ttgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGATGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGa < 2:3371841/140‑1 (MQ=255) ttgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGa < 2:4177072/140‑1 (MQ=255) ttgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGa < 2:291395/140‑1 (MQ=255) ttgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGa < 1:5528647/140‑1 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAGTTTCTCTAATTACCCCTGCGCTTGTCCAGGGGTTTTTCGGAAATATTGATTTATCCAGaa > 2:1828456/1‑140 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTCTGTAATTGCGCCGGCGCGTGACCACGTGTTTGTGGGCCAAATGGATTTATACAGaa > 2:677042/1‑140 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTCATTTTATATCATTACCCCGGCGCGTGACCAGCTGTTTTTGGGCCATATTGCTTTATTCAGaa > 1:1334997/1‑140 (MQ=255) ttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATg < 1:4492833/140‑1 (MQ=255) ttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATg < 1:1548716/140‑1 (MQ=255) ttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATg < 1:2971074/140‑1 (MQ=255) tgttgGGTGATGATGATATTTCTCTTGTTTTGTTTCAGCAAATGATGGAAGCCGTCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:4617902/137‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:4058469/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:107179/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 2:7444894/140‑1 (MQ=255) gttgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 2:4507438/138‑1 (MQ=255) gatgGGGGATGATGAGAGTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCATTATGGATTTATCCAGAATGTACGGCa < 1:2278497/140‑1 (MQ=255) gggggATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTCTCTAAATACGCCAGCGCATGAACAGGTGTTTTTGGGCAATAATGAATTATACACAAAGTACCGCACct > 2:7024618/1‑140 (MQ=255) gatgatGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTg < 1:673072/140‑1 (MQ=255) gatgatGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTg < 2:6227030/140‑1 (MQ=255) gatgagGAGAGTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTg < 2:3574499/140‑1 (MQ=255) tgatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCa < 2:3740206/140‑1 (MQ=255) tgatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCa < 1:2087839/140‑1 (MQ=255) tgatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCa < 2:7369079/140‑1 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCCTTTTGTATAATTAACCCGGCGCGAGACCACGTGTTTGTGGGCCAAATAGAGTTATCCACAAATTACGTCACCACtttaacc > 1:5323456/1‑135 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAAATTTGTCAAATTACGCCTGCGCTTTACCAAGTGTTTTTAGGCAAAATGGATTTATCCAGAATTTAAGGCAACACTTGAAcc > 2:1546465/1‑140 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTAAATTTTTTGTAATTACGCCAGCGCTTGAACAGGTGGTTTGGGGGAATATTGTGTTATCAAAAATTTAATGCCCCGCTTTCAcc > 1:3493247/1‑140 (MQ=255) tgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTATGGAATTACGCCAGCGCATTACCAGGGTTTTGTGGGCAAAATTGATTTATCCACAAAGTAACGCACCTCTTTCAccg > 2:3796323/1‑139 (MQ=255) agaTTTCTCTTGATTTGTTTCAGCAAATGATGGAAGGCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑ttt < 1:997593/140‑1 (MQ=255) aTTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTAACTTTTGTATAATTACGCCGGCGGTTGTACAGGGGGTTGGAGGCAATATTGGTTTATGCAGAAAGTTCGGCACCTCTTGGACC‑GTtgt > 2:1584469/1‑140 (MQ=255) ttCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGc < 1:5494269/140‑1 (MQ=255) tctcTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCTGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCt < 2:7080210/140‑1 (MQ=255) tctTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTCTCTAATTACCCCAGCGCTTGACCAGGTGTTTGTGGGCAATATGGATTTATCCAGAATGTACGGCACCGCGTGCACC‑TTTGTGCggg > 2:7524059/1‑140 (MQ=255) aTTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTACAATTTGTCTAATTCACCCGGCGCGTGAACACGGGTTTGTGGGGAAAATGTTTTTATACAGAAATTAAGGCACCGCTTTCACC‑GTTTTGGGGGGGGCa > 2:914780/1‑140 (MQ=255) tttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTGTGGAATTACGCCGGCGCGTGACCCGGGGTTTTTGGGGCATATTGATTTTTGCAAAATGTACGGCACCACATGGACCGTTTGGGGGGGGGGCaacca > 2:2758670/1‑137 (MQ=255) gCAACTGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAAGTCCGCCTGCCCGTGACCAGGTGTTTGTCGGCAATATGGATGTATCCAGAATGTACGGCACCACTTGCCCC‑TTTGTGCTGGGGGCAAACGACGGCg < 1:2797080/140‑1 (MQ=255) gCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCTGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCg < 2:2391983/140‑1 (MQ=255) gCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCg < 2:110773/140‑1 (MQ=255) cAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGt < 2:3615412/140‑1 (MQ=255) gAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTctgcctgc < 2:3455588/140‑1 (MQ=255) caGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTGGTGCTGGGGGAAAACGACGGCGGTCTGCCTGCa < 1:1457950/139‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:1019858/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:1831999/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:7386099/140‑1 (MQ=255) cGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGcc < 2:4313803/140‑1 (MQ=255) cGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGcc < 1:7531695/140‑1 (MQ=255) cGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGcc < 2:3108820/140‑1 (MQ=255) cGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGcc < 2:1693273/140‑1 (MQ=255) cGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATAGGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGcc < 2:5196090/140‑1 (MQ=255) gcgGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCtga < 2:7652543/140‑1 (MQ=255) gTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGaaa < 1:6134455/140‑1 (MQ=255) gCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATg < 1:5411922/140‑1 (MQ=255) ttACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATggg < 2:465979/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:3717524/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:582631/140‑1 (MQ=255) gtctcTAATTCCGCCTGCGCTTGACCAGGTGTGTGTCGGCAATAGGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGt < 1:73203/139‑1 (MQ=255) tctcTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTgggg < 2:5434898/90‑1 (MQ=255) tctcTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTc > 2:6142482/1‑140 (MQ=255) ctctAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCg > 2:17366/1‑140 (MQ=255) tctAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCgg > 2:2054644/1‑140 (MQ=255) tctAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCgg > 2:479320/1‑140 (MQ=255) aTTCCGCCTGCGATTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGa < 2:5049857/140‑1 (MQ=255) cagCCTTCGCTTGACCAGGTGTTTGTCGGAAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGTTGCTGTCGGACGATGa < 1:3899483/138‑1 (MQ=255) ccTGCGCTTGACCAGGTGTTTGTCGGCACTCTGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGAACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCg > 1:3135611/1‑140 (MQ=255) ccTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATggg > 1:3764168/1‑120 (MQ=255) ccTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCg > 2:1432879/1‑140 (MQ=255) ccTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCg > 2:2326625/1‑140 (MQ=255) ccTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCg > 2:2139563/1‑140 (MQ=255) cgcTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGaa > 2:6437842/1‑140 (MQ=255) cgcTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑GTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGaa > 1:6043205/1‑140 (MQ=255) gACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGaaaa > 1:2566971/1‑107 (MQ=255) gACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGaaaa < 2:2566971/107‑1 (MQ=255) gACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCt < 2:6618190/140‑1 (MQ=255) gACCAGGTGTTTGTCGGCAAGATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCt < 2:5856570/140‑1 (MQ=255) aCCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTCCGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTg > 1:2699356/1‑140 (MQ=255) gtgtTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAAc > 1:4351130/1‑140 (MQ=255) gtgtTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAAc > 1:7227281/1‑140 (MQ=255) tttGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGAt < 1:6273872/140‑1 (MQ=255) tttGTCGGAAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGAt < 1:5090804/140‑1 (MQ=255) ttGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGAtt > 1:1960858/1‑140 (MQ=255) tGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTctgcctgc < 1:6534375/81‑1 (MQ=255) tGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTctgcctgc > 2:1927283/1‑81 (MQ=255) tGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAGTGGGGTGCTGTCGGACGATGACAGGGAATGGCTGAAAACGATTg > 1:3418035/1‑140 (MQ=255) tGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTg > 1:5905577/1‑140 (MQ=255) tGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTg > 1:7618296/1‑140 (MQ=255) tGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTg > 1:7100137/1‑140 (MQ=255) tGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑GTGGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTg > 1:486455/1‑140 (MQ=255) tGTCGGCAATATGGATGTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCACACGACGGCGTTCTGCCTGCACGCCCTGATGAAACTGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTg > 1:4882598/1‑140 (MQ=255) gCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGAtt > 2:5806584/1‑140 (MQ=255) gCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGAtt > 1:3096766/1‑140 (MQ=255) gCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGAtt > 2:4951406/1‑140 (MQ=255) atatTGATTTATCCAGAATGTAAGTCACCTCTTGCACC‑TTTGTGCTGGGGGAAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGAACGGGAATGGCTGAAAACGATTGGGATTGAg < 1:2502009/140‑1 (MQ=255) atatGTATTTATACAGAATGTACGGTACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGGGTTCTGCGTGCAGGCGCTGATGAAAATGGGTTGCTGTGGGACGTTGACCGGGAATGGCTGAATACGATTGGGATTGAg < 1:1603962/140‑1 (MQ=255) atatGGATTTATCCAGAATGTACGGCACCTCTTGCCCC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGATTGAg < 2:5939804/140‑1 (MQ=255) atatGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGATTGAg < 2:6867456/140‑1 (MQ=255) atatGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGATTGAg < 1:683115/140‑1 (MQ=255) | TACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCTGCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACC‑TTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACGATTGGGATTGAGCT > NZ_CP034943/1111545‑1111821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |