| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,512,548 | A→T | 5.7% | intergenic (‑76/‑37) | EO946_RS07905 ← / → typA | YlaF family protein/translational GTPase TypA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,512,548 | 0 | A | T | 5.7% | 857.6 / 6.0 | 268 | intergenic (‑76/‑37) | EO946_RS07905/typA | YlaF family protein/translational GTPase TypA |
| Reads supporting (aligned to +/- strand): ref base A (176/69); new base T (2/18); total (180/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.49e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 272 total aligned reads displayed.
AATACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCC > NZ_CP034943/1512416‑1512687 | aataCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCGTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑aac > 2:5080945/1‑139 (MQ=255)aataCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGTATGTGTGG‑TATAATGTG‑aaa > 2:2998273/1‑140 (MQ=255) taCTGAAAACCGCTGCAACTGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCGTATGATAAGTTTACAGAAAAAGGTGAAGCTTTTAAAGAGGATGTGTTG‑TATAATGTG‑AAAGt > 1:3332766/1‑140 (MQ=255) taCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGt > 1:2537395/1‑140 (MQ=255) tGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAATAGGATGTGTGG‑TATAATGTG‑AAAGTTAt > 2:5996563/1‑140 (MQ=255) tGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTAt > 1:5582109/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCCTAAGTTTACAGAAAAACGTGTCGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTAtgt > 1:3884269/1‑138 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 2:2731472/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:5928913/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:5395093/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 2:3140177/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:4216368/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:365648/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:6899757/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:7320967/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:3004522/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:2855084/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 2:1137869/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:171183/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 2:1807100/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTGTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:4485034/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTGTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCt > 1:743028/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTGTTACGTCTTATCATAAGTTTACAGACAAACGTGACGCTTTTCAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTAtat > 2:3904412/1‑138 (MQ=255) aaaaCCGCTGCAAATGAAAATAATAGTAAAAGCCAATTCA‑TTTTTTCATATTTTCGATGCCCTTTTAAGTCTTATCATAAGTTTACAGAAAAACGTGACTCTTTTAAATATGATGTGTGG‑TATAAGGTG‑AAAGTTATCTa < 2:1512220/140‑1 (MQ=255) aaaCCGCTGCAAATGCAAATAATAGTAAAAGACAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTa < 2:3566510/140‑1 (MQ=255) aCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAt > 1:2298063/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTCAttt > 2:5561232/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAttt > 1:6423532/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAttt > 2:6166441/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAttt > 1:6231892/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAttt > 2:263599/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAttt > 2:4637088/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAttt > 1:3178869/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGATTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAAttt > 2:5207433/1‑140 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTtta > 2:6624524/1‑140 (MQ=255) gcaaatgcaaatAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTttatt < 2:2973604/140‑1 (MQ=255) aatgcaaatAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAgg < 2:74670/140‑1 (MQ=255) tgcaaatAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGgag < 2:222201/140‑1 (MQ=255) gTACAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTGACAGAGGCTGTGTGG‑GATAATGTG‑AACGTTCTCTCATTTTATGAGGAGATGTCAAAGTg > 2:3975491/1‑140 (MQ=255) gTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTg > 1:3562712/1‑140 (MQ=255) gTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGATTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAACAGTg > 1:6061829/1‑140 (MQ=255) gCCAATTGATTTTTTTCATATTTTCCATCCCCTTTTACGTCTAATCATATTTTTAAATACAAACTTTACTCTTTTAAAGAGGATGTTTGG‑TATAATGTG‑AAAGTTATATAATTTAATTACGACATGAAAAAGTGAAACtt > 1:6792039/1‑140 (MQ=255) gCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACtt > 2:7090455/1‑140 (MQ=255) ttCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑ACAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGaaa > 1:7534566/1‑140 (MQ=255) tttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGAt < 2:5342439/140‑1 (MQ=255) tttCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATc < 1:7090455/140‑1 (MQ=255) ttCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAAGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATcg < 1:5681130/140‑1 (MQ=255) cATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGa < 2:7338134/140‑1 (MQ=255) aTCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGTATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGat < 2:5887139/140‑1 (MQ=255) aTCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGat < 2:1345308/140‑1 (MQ=255) aTCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGat < 2:353612/140‑1 (MQ=255) tCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGatt < 1:3473816/140‑1 (MQ=255) cTTTTACGTATTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTg < 2:1029632/140‑1 (MQ=255) cTTTTAAGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTg < 2:324337/140‑1 (MQ=255) tttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc < 2:7565469/140‑1 (MQ=255) ttATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa > 2:3680709/1‑140 (MQ=255) ttATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa > 1:636296/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCTCGATTATTGCCCACGTTGAc > 2:7283084/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTTCCCACGTTGAc > 2:5688348/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 2:5840806/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc < 1:5126612/140‑1 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:4052505/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 2:7252831/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 2:885856/1‑140 (MQ=255) tCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGAGTCTTGCCCACGTGGTCCa > 1:6124879/1‑140 (MQ=255) gTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:1064815/122‑1 (MQ=255) tttACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCTAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGaaa > 2:1940060/1‑140 (MQ=255) tttACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGaaa > 2:2367280/1‑140 (MQ=255) tttACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACAATGGGaaa > 2:6947247/1‑140 (MQ=255) tttAAATAAAAACGTGAAGATTTTAAAGATTTTGTGTGG‑TATAATTTG‑AAATTTATATAATTTTATTAGGAGATTAAAAAGGTAAACTTCGAAATTATCTTCGCAACCTCGCGATTATTGCCCACGTTGCCCATGGGaaa < 2:870676/140‑1 (MQ=255) tACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAAc > 2:957025/1‑140 (MQ=255) tACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAAc > 1:1252256/1‑140 (MQ=255) tACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAAc > 1:788327/1‑140 (MQ=255) aCAGAAAAACGTGACGCTTTCAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc > 2:4736265/1‑119 (MQ=255) aCAGAAAAACGTGACGCTTTCAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc < 1:4736265/119‑1 (MQ=255) actcTTTAAAAGAGTTTGTGTGT‑TATATTTTT‑AAAGTTATATAATTTTATTATGATATGAAAAATTTAAACTTCTAAATGATCTTCGCAAAATCGCTATTTTTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATc < 2:4674112/137‑1 (MQ=255) aCGCTTTTAACGAGTCTG‑GTGGTTCTTATGTG‑AAAGTTATCAAATTTTATTAGGAGATGAAAACGTGAAAATTCAAAATGCTCTTCGCAACATCGCTATTATTGCCCAGGTGGACCAGGGCAAAACGACTCTAGTCGATc < 2:4447568/140‑1 (MQ=255) aCGCTTTTAAAGAGGTTGTTTGT‑TATATTTTT‑AAAGTTATTTAATTTTATTAGGAGATCAAAAAGTTAAACTTCGAAATGATCTTCGCAACATCGCTATTTTTGCCCAGGTTGACATTGGGAAAACGACTCTAGTCGATc < 2:3357801/140‑1 (MQ=255) taaaaGAGGTTGTGTTT‑TATACTGTG‑AATGTTATAAATTTTTTTTAGGTGATTAAAAAGTAAAAGTTCTAATTGATCTCCGCAACATCGCTTTTTTTGCCCCGTTTCACCATGGAAAAACGACTCTAGTCGATCAGCttt < 1:5080945/138‑1 (MQ=255) ggATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACAATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCa > 1:4827874/1‑140 (MQ=255) gATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCTCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 2:1641621/1‑140 (MQ=255) gATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCac > 2:6371987/1‑139 (MQ=255) gATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 2:4287533/1‑140 (MQ=255) gATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:995741/1‑140 (MQ=255) gATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:3548325/1‑140 (MQ=255) gATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:2763895/1‑140 (MQ=255) gATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:1993216/1‑140 (MQ=255) ttttttgG‑TATATTTTT‑AATGTTATCTATTTTTTTTTGTTGATTAAAATGTTAAAGTTGTAATTGATCTGCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:5243080/135‑1 (MQ=255) tttggtgt‑TATAATGTT‑AAATTTTTTTTTTTTTTTTTGTTGATGAAAAATTGAAAGTTCGAAATTTTTTTCGAAACATCGGTTTTATTGCCCACTTTTACCATGGGAACACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:6662197/136‑1 (MQ=255) ttgtgttT‑TATATTTTT‑AAATTTATTTATTTTTATTTGGATATTAAAAATTTAAATTTCTAAATGATGTTCGCAACTTCGCTTTTATTGCCCAGGTTGACCTGGGTAACACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:6439225/139‑1 (MQ=255) ttgtgttG‑TATATTGTT‑AATTTTATAATTTTTTTTTAGGAGATTAAAATTTCAAACTTCGAAATTATCTTCCCAACATCGCTTTTTTTGCCCAGGTTCACCATGGCAACACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:972913/139‑1 (MQ=255) ttgtgtgT‑TATATTGTT‑AATTTTATATATTTTTATTAGGAGATTAAAATGTCAAACTTCCAAATGATATTCCCAACCTCGCTTTTATGCCCCACGTGCACCTGGGCAACACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:2360008/139‑1 (MQ=255) tggggtgG‑TATAATTTT‑AAATTTTTATATTTTTATTTGTCGTTTAAAAAGTTAAACTTCGAACGGATCTTCGAAACCTCGCTTTTATTGCCCAGGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:841031/136‑1 (MQ=255) gggggtgG‑TATAA‑GTGTAAAGTTATCTAATTTTTTGAGCAGATTAAAACGTGAAACTGCGAATTTTTCTTCGAAACACCGCTATTCTGGCCCACGTTCACAATGGCAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:630281/136‑1 (MQ=255) tgtgtgG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTACTCAACATCGCGATTATTGACCACGTAGACCATGGGAAAACCACTCTAGTCGATCACCTTTTAAACCAGGc > 2:6051823/1‑140 (MQ=255) tgttataTTGTT‑AATGTTATCTAATTTTTTTAGGAGATTAAAAATTTAAACTTCTAAATGATGTTCCAAACATCGCTTTTTTTCCCCCCGTTGACCTTGGCAACACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGt < 1:2177888/137‑1 (MQ=255) g‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTAc > 1:636676/1‑140 (MQ=255) g‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTAc > 1:1104022/1‑140 (MQ=255) taATGTT‑AAATTTATCTATTTTTATTAGTTTATGAAAAAGTTAAACTTCTAAATTATCTTCGAAACATCGCGTTTTTTGCCCACTTTCACCTTGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGtt < 2:2101073/140‑1 (MQ=255) aTGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTcc > 1:145540/1‑140 (MQ=255) | AATACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGG‑TATAATGTG‑AAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCC > NZ_CP034943/1512416‑1512687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |