| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,498,775 | C→A | 6.4% | Q2K (CAA→AAA) | EO946_RS18005 → | spore germination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,498,775 | 0 | C | A | 6.4% | 982.4 / 4.3 | 462 | Q2K (CAA→AAA) | EO946_RS18005 | spore germination protein |
| Reads supporting (aligned to +/- strand): ref base C (124/288); new base A (2/48); total (126/336) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 466 total aligned reads displayed.
GAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACAGA > NZ_CP034943/3498638‑3498914 | cGCTTCCTTGTTATGATCTCACAGTCAATACAAGGTTTGTTTCAGCCTTTTCCTTATCAATAATAATTCTCCTTTTTCTATACAAATTAAGAAAAACCGTCAATCTTTTTTAGAAAGGGGAGAAAAACTATGCAAATCgc < 2:2196542/140‑2 (MQ=255) ccTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTg < 2:6077898/140‑1 (MQ=255) ttatATCACTTTCAATAGACGGTTTGTTTCAGCATTTTCATTATGAAGAATAATTCTCCTTTTTTGATACAAATTAACAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAg < 2:6750200/140‑1 (MQ=255) ttatATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAg < 2:375782/140‑1 (MQ=255) ttatATAAATTTCAATAGAAGTTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATAAAAATTAAGAAAAACCGTCAATCTGTTTTATAACGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAg < 1:4101875/140‑1 (MQ=255) atatCAGTTTAAATATATGTTTTTTTTCTGCCTTTTCCTTATGAATAATAATTATACTTTTTTGATACAAATTAATAAAAACCTTAATTTTTTTTTATAACGGGTACAGAAAATTTGCAAATCGACTCTGATCTCCAGca < 2:624368/140‑1 (MQ=255) atatCACTTTCATTAGAAGTTTTGTTTCAGCCTTTTCCTTATGAATAATAATTCTCATTTTTTTATACAAATTAATAAAAACCGTCAATCTTTTTTATAAAGGGGAGAGAAAATATGAAAATCGACTCTGATCTCCAGca < 1:5315352/140‑1 (MQ=255) atatCACTTTCAATATAAGTTTTTTTTCAGCCTTTTCATTATTAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTAAATCTGTTTTATAAAGGGGAGAGAAAGTATGCAAATCGACTCTGATCTCCAGca < 1:7547027/140‑1 (MQ=255) atatCACTTTCAATAGACGGTTTGTTTACGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGca < 1:3230611/140‑1 (MQ=255) atatCACTTTCAATAGAAGTTTTGTTTCAGCCTTTTCATTATTAAGAATAATTCTCATTTTTTTATAAAAATTAATAAAAACCGTCAATCTTTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:1366819/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAATAATAATTCTCTTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:1570706/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCATTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTAAATCTTTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:4774403/140‑1 (MQ=255) atatCAATTTCAATATAAGGTTTGTTTCAGCCTTTTCCTTATGAATAATAATTCTCATTTTTTGATACAAATTAATAAAAACCGTCAATCTTTTTTATAACGGGGAGATAAAATATGCAAATCGACTCTGATCTCCAGca < 1:1245900/140‑1 (MQ=255) atatAACTTTAAATAGAAGTTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAATAAAAACGGTAAATCTGTTTTATAAAGGGTAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:2407029/140‑1 (MQ=255) atacCAATTTCAATAGAAGGTTTTTTTCAGCATTTACCTTATTAAGAATAATTCTCCTTTTTGGAAAAAATTTAAGAAAAACCGTCAATCTTTTTTATAACGGGGAGATAAACTATGCAACTCGACTCTGATCTCCAGca < 1:489755/140‑1 (MQ=255) tatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGcac < 1:5355245/140‑1 (MQ=255) atCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGcaca > 2:487249/1‑140 (MQ=255) atCACTTTCAATAGAAGGTTTGTTTCAGACTTTTCCTTATGAAGAATAATTATCCTTTTTTGATAAAAATTAAGAAAAACAGTAAATGTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGcaca < 1:7326972/140‑1 (MQ=255) tCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGa > 1:3792442/1‑140 (MQ=255) tCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGa > 2:6342616/1‑140 (MQ=255) tCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGAACAATATAGa > 2:139415/1‑140 (MQ=255) aaGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTg > 2:2027290/1‑140 (MQ=255) ttCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCaa > 1:4557618/1‑140 (MQ=255) ttATGAAGAATAATTCTCATTTTTTGATAAAATTTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATg < 2:3653933/140‑1 (MQ=255) tATTAATAATTATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAATGGGGATATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGa < 1:6198419/140‑1 (MQ=255) tATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGa < 1:4859460/140‑1 (MQ=255) tATCAATAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAAATATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGa < 1:2998137/140‑1 (MQ=255) aTGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGATAAACTATGCAAATCTACTCTGATATCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGTGGCAAAATGAc > 2:3969784/1‑140 (MQ=255) tcaagtaTAATTCTCCTTTTTTGAGACAAATGAAGAAAAACCGTCATTCTGTTTTATCAGGGGGAGAGAAACTATGCAAATCGACGCTGATCTCCAGCACAATCTAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACg < 2:4336165/138‑1 (MQ=255) tcaaaaataatTCTCCTTTTTGTATAAAAATTAACAAAAACCGTAAATCTTTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACg < 1:6688840/135‑1 (MQ=255) tGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATATGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACg < 1:5787103/140‑1 (MQ=255) aataatTCTCCTTTTTTTATAAAAATTAACAAAAACCGTCAATCTGTTTTATAACGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATc < 2:6846920/140‑1 (MQ=255) aataatTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATc < 2:1454336/140‑1 (MQ=255) aataatTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATc < 2:2770175/140‑1 (MQ=255) aataatTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATc > 2:307083/1‑140 (MQ=255) aataatTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATc < 2:7097425/140‑1 (MQ=255) aataatACTCCTTTTTTCATAAAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATc < 2:2470251/140‑1 (MQ=255) aataatACCCCGTTTTTGATAAAAATAAACAAAACCCGACAATCGGTTTTATAAAGGGGAGACAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATc < 1:1438382/140‑1 (MQ=255) tcattttttGATAAAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTta < 1:4268906/137‑1 (MQ=255) cTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCACAATGACGATATCATAGTTtata > 1:6566445/1‑140 (MQ=255) cTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTtata > 1:687496/1‑140 (MQ=255) tttGATACAAATTAACAAAAACCGTCAATCTGTTTTATAAAGGGGATAGAAACTAGCCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtt < 2:4090673/140‑1 (MQ=255) tttGATAAAAATTAAGAAAAACCGTAAATCTGTTTAATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtt < 1:3917960/140‑1 (MQ=255) ttggATAAAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGACAGAAACTATGCAAATCGACTCTGATCTCCAGCCCAATATAGACACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtt < 1:798999/137‑1 (MQ=255) ttaTACAAATTAAAAAAAACCGTCACTCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtttt < 2:2502291/138‑1 (MQ=255) tcaTACAAATTAACAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtttt < 2:7381062/138‑1 (MQ=255) aTACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTTGGGCAAAAAGACGATATCATATATTATACGTTTTCt > 2:3821259/1‑140 (MQ=255) aaTTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTgg < 2:414029/140‑1 (MQ=255) ttAATAAACCCCGGCAATGTTTTTTATAACGCGGTGACTAATTCTGCAAATCGACTCGGATCTCCAGCCCAATAGAGACACATTG‑AACAAAATTTTGCGGGAAAATGCCGATCTCATATTTTATACGTTTTCTATTGgag < 2:6630333/140‑1 (MQ=255) ttAAGAAAAACCGTCAATCTGTTTTATAAAGGGTAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGgag < 2:159867/140‑1 (MQ=255) ttAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGgag < 2:5379269/140‑1 (MQ=255) ttAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGgag < 2:444286/140‑1 (MQ=255) ttAAGAAAAACCGTCAATCTGTTGTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATCTAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGgag < 2:179862/140‑1 (MQ=255) tAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGgaga < 2:6400528/140‑1 (MQ=255) taaaaaCCGTAAATCTGTTTTATAACGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:1173366/139‑1 (MQ=255) gAAAAACCTTCAATCTGTTTTATAAAGGGGAGATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:5303608/140‑1 (MQ=255) gAAAAACCGTCACGCTGTTTTATAAAGGGGAGAGAAACTCTGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGCGCAAAAGGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 1:23550/140‑1 (MQ=255) gAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:5957952/140‑1 (MQ=255) gAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:2852949/140‑1 (MQ=255) gAAAAACCGTCAATCGTTTTTATAAAGGGGAGAGAAACTATCCAAATCGACTCTGATCTCCAGCACAATATAGAAACCTTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:192286/140‑1 (MQ=255) caaaaaCCGACAAGCTGTTTTATAACGGGGAGAGAAACTAGGCAAATCGACTCGGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:6524017/139‑1 (MQ=255) aaaaaCCTTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:4831533/140‑1 (MQ=255) ccGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAAGGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGcagaca < 1:2072806/140‑1 (MQ=255) ccGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGcagaca < 2:3337977/140‑1 (MQ=255) ccGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGcagaca < 1:3350874/140‑1 (MQ=255) ccGTAAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGcagaca < 2:5159941/140‑1 (MQ=255) gTCAAGCTGTTTTTTAACGGGGAGATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGtagacaga < 1:3659307/140‑1 (MQ=255) aattttttttATAAAGGGGAGAGAAAATATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAggg < 2:7602427/134‑1 (MQ=255) aaTCTGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATAGAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAggg < 2:2278370/140‑1 (MQ=255) aaTCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAggg < 1:1107496/140‑1 (MQ=255) aTCTTTTTTTTAAAGTGGAGATAACCTATTCAAATCGACTCTGATCTCCAGCACAATATACAAACATTGAAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAggg < 2:3446261/140‑1 (MQ=255) aTCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGc < 1:5461486/140‑1 (MQ=255) cttttttATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGt < 2:87426/137‑1 (MQ=255) cTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGt < 2:1078907/140‑1 (MQ=255) gTTTTATTACGGCGAGAGCAACTCTCAAACTCGACTCTGATCTCCAGCCCAATAAAGCAACAGTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTAATTTTGGAGACAGCAGACAGAGGGCGTGc < 1:6044647/140‑1 (MQ=255) gTTTTATAATGGGGCGATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:1903016/140‑1 (MQ=255) gTTTTATAATGGGGAGATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAACATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:3446301/140‑1 (MQ=255) gTTTTATAAAGGGGAGCGAAACTAGGCAAAGCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:5859130/140‑1 (MQ=255) gTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:7404111/140‑1 (MQ=255) gTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:3622335/140‑1 (MQ=255) gTTTTATAAAGGGGAGAGAAACTATCCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:2938869/140‑1 (MQ=255) gTTTTATAAAGGGGACAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAAGGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:6874617/140‑1 (MQ=255) ttATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTACAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtg < 2:5699824/140‑1 (MQ=255) ataAAGGGGAGATAAAATATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtgtt < 2:5552172/140‑1 (MQ=255) ataAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGACACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtgtt < 1:5188016/140‑1 (MQ=255) ataAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtgtt < 1:2855513/140‑1 (MQ=255) ataAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtgtt < 1:7165760/140‑1 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTatat > 1:2707804/1‑140 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTatat > 2:4255023/1‑140 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTatat > 1:1858865/1‑140 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCGGTTGTatat > 1:7036735/1‑140 (MQ=255) ggAGACAACCTATGCAAATCCACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAACTGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATAtt < 1:5005714/140‑1 (MQ=255) agagaAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTg > 1:2281930/1‑140 (MQ=255) agaAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtgttg < 2:6953793/130‑1 (MQ=255) cTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTg > 1:6348527/1‑140 (MQ=255) cTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTg > 2:2667263/1‑140 (MQ=255) aTGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATCTTGACGGTTTGAc > 2:4597373/1‑140 (MQ=255) aTGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGAc > 2:3552120/1‑140 (MQ=255) tGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACa > 1:5711516/1‑140 (MQ=255) cAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACAGa > 1:2484572/1‑140 (MQ=255) | GAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACAGA > NZ_CP034943/3498638‑3498914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |