| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 316,256 | G→C | 5.4% | A26P (GCA→CCA) | opuAA → | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 316,256 | 0 | G | C | 5.4% | 1738.1 / 5.8 | 657 | A26P (GCA→CCA) | opuAA | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA |
| Reads supporting (aligned to +/- strand): ref base G (405/191); new base C (2/52); total (412/245) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.15e-22 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 696 total aligned reads displayed.
CTGTTTGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTA > NZ_CP034943/316117‑316394 | cTGTTTGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACaaagaaag < 1:139364/140‑1 (MQ=255) gtgtgtgtgGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCa > 1:7506508/4‑140 (MQ=255) gTTTGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCa > 1:1669356/1‑140 (MQ=255) gTTTGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCa > 2:4017068/1‑140 (MQ=255) gTTTGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATATAAAATTTTTGG‑GAAACAAACAAAGAAAGCa > 1:5138613/1‑140 (MQ=255) tttGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAg > 2:1291812/1‑140 (MQ=255) tttGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAg > 2:1013707/1‑140 (MQ=255) tttGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAg > 2:4319187/1‑140 (MQ=255) ttGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACACACAAAGAAAGCAGt > 2:496350/1‑140 (MQ=255) ttGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGt > 1:3463624/1‑140 (MQ=255) ttGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGt > 1:6447646/1‑140 (MQ=255) ttGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGt > 1:2088032/1‑140 (MQ=255) gtgtgGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTc < 1:764998/140‑1 (MQ=255) aTGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAATAAAGCAGTTCAAATGCt > 1:5622683/1‑140 (MQ=255) ttACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTCAAATTTTTGG‑GACACAAACAAAGAAAGCAGTTCAAATGCTTGc > 2:415767/1‑140 (MQ=255) gtgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGGTTGCCAACGGaa > 2:6357134/1‑140 (MQ=255) gtgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaa > 1:3258504/1‑140 (MQ=255) gtgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaa > 2:1958155/1‑140 (MQ=255) gtgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaa > 2:188863/1‑140 (MQ=255) ttACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACCAAGAAAGCAGTTCAAATGCTTGCCCACGGAAAGa > 2:6564034/1‑140 (MQ=255) ttACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATGACGATAAAAGTCGAGAAAGTATCTATAATTTTTGG‑GAAACAATCAAAGACAGCAGGTCAAATGCTTGCCAACGGACAGa > 2:2686855/1‑140 (MQ=255) gtACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGa > 2:2537377/2‑140 (MQ=255) aCGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACa > 1:3757834/1‑140 (MQ=255) aCGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTAGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAATTGCTTGCCAACGGAAAGACa > 1:92156/1‑140 (MQ=255) ataAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAATCAGTTCAAATGCTTGCCAACGGAAAGACaaaaaaa > 2:5285611/1‑140 (MQ=255) ataAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACaaaaaaa > 2:23152/1‑140 (MQ=255) gagacaggTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAaga < 2:6002523/133‑1 (MQ=255) aaGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAACCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAaga < 2:6666758/140‑1 (MQ=255) aaGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAaga < 1:132156/140‑1 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCt > 1:109838/1‑140 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCt > 1:3570659/1‑140 (MQ=255) tttAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTc > 2:4380150/1‑101 (MQ=255) ttAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGaa > 1:6919204/1‑140 (MQ=255) tgttgtaaaaaTATGATTGTATCTCACAAACAAATTAAGATAAAAGTCGAGAACTTAAATAAATTTTTTGG‑CAAAAAAAAAAATAAACCAGTTAAAATGGTTCCCACCGCAAAAAAAAAAAAAGATATCCTGAAAGCGAc < 1:7184965/133‑1 (MQ=255) gggAGGGAAAATATGAGTGTATATCAGAAACAAATTAATATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑TAAAAAAACAAATAAAGCATTTAAAATGCTTGCCAACGCAAAGAAAAAAAAAGAGATCCTGAAAGCGAc < 2:855905/139‑1 (MQ=255) gAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCg > 1:3106044/1‑140 (MQ=255) gAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCg > 1:4022486/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:1231329/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:2378429/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:2923096/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 2:7275020/1‑140 (MQ=255) gAAATTATTATTGTAGATGATAAACATATTATTATAAAAGTCTAGAAAGTTTATAAAATTTTTGG‑TACAAAAACAACTAATCCAGTACATTTGGTTGCCACCGCAAAGACAAAAAAAGAGATCGTTAAAGCGACCGGATc < 2:7164397/140‑1 (MQ=255) aaaTATGAGTGTAGAGGAGAAACCAATTAAGATACAAGTCGAGAAAGTATCTAAAATTTTTGG‑GCAACAAACAAAGAAAGCAGTTCAATTGCTTGCCAACGGAAAGAGACTAAAAGAGATCCTGAAAGCGAGCGGCTCag > 1:1000992/1‑139 (MQ=255) atGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGt > 2:1536419/1‑140 (MQ=255) gtttacaTGACAAAAAAATAAACATAAAAGTCGATAAAGTATCTAAAATTTTTGG‑TAAAAAAAAAAAGAACGCTTTTCAATGGCTTGCCAACGCAAAGAAAAAAAAAGAGATCCTCAAAGCGACCGGATCAACCGTTggg < 1:6631063/134‑1 (MQ=255) tgtAGATGAGAAACCAATTAAGATCAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTgggg > 2:5874448/1‑140 (MQ=255) tgtAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTgggg > 1:6134398/1‑140 (MQ=255) tAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTa > 2:2028089/1‑140 (MQ=255) agaAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGAGACCGGATCAAACGTTGGGGTAAATCaa > 2:3205033/1‑140 (MQ=255) gaAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAg > 1:432338/1‑140 (MQ=255) aaaCCACTTAACAAAAAACTCCATAACCTATCTAAAATTTTTGG‑CAAACAAACAAACAAAGCAGTTCAAATGCTTCCCACCGCAAACACAAAAAAACAGATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc < 2:4875090/140‑1 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:2784752/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:1951947/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:2213532/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTGGGGGTAAATCAAGc > 2:1606473/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAACAAAGCAGTTCAAATGCTTGCCACCGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc < 2:7364279/140‑1 (MQ=255) aCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAg > 1:7040904/1‑140 (MQ=255) acAATTAACATAAAAGACGAGAACGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCAAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGa < 2:5185759/139‑1 (MQ=255) aaTTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGGTGGGGTAAATCAAGCAGAtt > 2:4597423/1‑140 (MQ=255) tAATATAAACGTCGAGAAAGTATCTAAAATTTTGGG‑CAAACAAACAAAGAACGCCGTAAAAATGCTTGCCACCGTAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:1118560/140‑1 (MQ=255) tAAGATAAAAGTCGATAAATTATCTAAAATTTTTGG‑GAAACAAAAAAAGAAAGCAGTTCAAATGCTTGCCACCGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:3463624/140‑1 (MQ=255) tAAGATAAAAGTCGACAATGTATCTAAAATTTTTGG‑GAAACAAAAAAACAAAGCAGTTCAAAGGCTTGCCAACGGAAACACAAAAAAATAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:6913464/140‑1 (MQ=255) tAACATAAAAGCCGACAAAGTATCTAAAATTTTTGG‑CAAACAACCAAAGAACCCAGTTCAAATCCGTGCCAACGCAAAGACAAAAAAACAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:1359647/140‑1 (MQ=255) aaacaaaaaaGTCGACAAATTA‑AAAAAATTTTTGGCCAAAAAAACAAACACAGCATTACAAATGCTTGCCAACGCAAACACAAAAAAATACACCCTCACCGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 1:654878/134‑1 (MQ=255) aaaGATAACCGTCCAGACAGTCTCTAAATTTTTGGG‑CAAACAAAAAAACAAAGCCTTTAAAAGGCGTGCCACCCCAAACAAAAAAAAACAGACCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 1:4596162/139‑1 (MQ=255) aGATACAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1762385/140‑1 (MQ=255) aGATAAACGTCGATAAAGTATCTAAAATTTTTGG‑CAAAAAAACAAAGAAAGCATTAAAAATGCTTGCAAACGCAAACAAAAAAAAAGAGAACCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 1:5285611/140‑1 (MQ=255) aGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGACAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:5644248/140‑1 (MQ=255) aGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑CACAAAAACAAACAACGCAGTACAAAGGCTTGCAAACGCAAACACAAAAAAACATATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1199708/140‑1 (MQ=255) aTAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCACGCAGATTTTGATGt > 2:6813283/1‑140 (MQ=255) aaaaGTCGAGAAAGTATCTAAAATTTTTGG‑GACACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGtat > 2:703625/1‑140 (MQ=255) aaaaGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGtat > 2:6452083/1‑140 (MQ=255) aGTCGAGAAAGTATCTAAAATTTTTGG‑CAAACAAACAAAGAAAGCCTTTCAATTGCTTGCAAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATatg < 2:2871612/140‑1 (MQ=255) taatttatataATATTTTTCT‑AAAAAAAACAACAAAACCAGTAAATTTGGTTGCAACCGCAAACACAAAAAAATTCATCGTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTg < 1:2645606/135‑1 (MQ=255) taaaGTATCTAAAATTTTGGG‑TAAAAAAACAAACAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAATACATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTg < 2:369826/139‑1 (MQ=255) caaaGTATCTAAAATTTTGGG‑CAAACAAAAAAATAAAGCATTTAAAATGCTTGCCAACGTAAAGAAAAAAAAAGACATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTg < 1:5529921/139‑1 (MQ=255) caaaGCATCTAAAATTTTTGG‑GAAACAAACAACCAACGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTg < 2:3611950/139‑1 (MQ=255) aTCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGatat > 1:4996900/1‑140 (MQ=255) cTACAATTTTGGG‑CACACAAACAAAGAAAGCAATTCAAATGCTTGCAACCGCTACGACAAAAACAGAGAGCCGGAAAGCGACCGGCTCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATAttt < 2:7436413/140‑1 (MQ=255) aaaaTTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGt > 1:597383/1‑140 (MQ=255) tttttGG‑CAAAAAAAAAAAGAACGCATTTCAAATGATTGCAAACGAAAAGAAAAAAAAAGAGATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGtcatc < 2:5944174/140‑1 (MQ=255) tttGG‑GAAACAAACAAAGAAAGCAGTTCAAAGGCTTGCAAACGCAAACACAAAAAAAGATATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 1:6245416/140‑1 (MQ=255) tttGG‑CAAACAAACAAAGAACGCAGTTAAAATCCTTGCCAACGCAACCCCAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:6591162/140‑1 (MQ=255) tttGG‑CAAACAAAAAAAGAAAGCAGTTCAAATGATTGCCAACTGAAAGACAAAAAAACAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 1:1796801/140‑1 (MQ=255) tttGG‑CAAAAAAACACACAAACCCGTACACAGGCTTGCCCACGCAAACACAAAAAAAGACATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 1:6346945/140‑1 (MQ=255) ttctgccaaacaaacaaacaaacCAGTAAAAAGGCTTCCCAACGAACACACAAAAAAACACATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGtcatca < 1:4849329/133‑1 (MQ=255) gttGG‑CAAACAACCAAACAACGCCGTCAAAAGGCTGGCCAACGTAAACACAAAAAAAGACATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 1:7410273/139‑1 (MQ=255) ttGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCACGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATg > 2:3394453/1‑140 (MQ=255) ttGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATg > 1:6751020/1‑140 (MQ=255) tGG‑CAAACAAACAAAGAAACCATTTCAAATGATTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATgg < 2:4753508/140‑1 (MQ=255) ggg‑gAACCAACAAAAGAAAGCATTTCAACTCCGTGCCACCTGAACCACAAAAACTCTGACCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCACGCAGATTTTGAGGTATATGATGGTGAGATATTTGTCATCATgg < 1:2519599/139‑1 (MQ=255) cgAAACAAACAAATAAAGCAGTTCATCTGCTTCCCAAGGGACATACAAAAAAAGCCAGCCTGAAAGCGACCGGATCTACCGTTTGGGTAAATCAAGCAGATTTTGATTTATATGATGGTGAGATATTTGTCATCATGGGt < 1:4139041/139‑1 (MQ=255) agCAGTTCAAATGCTTGCCACCGGAAAGACAAAATAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAGTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTa > 2:3036850/1‑140 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTCTATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTa > 1:3385863/1‑140 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGtc > 2:7587230/1‑139 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTa > 2:6285564/1‑140 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTa > 2:61682/1‑140 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTa > 1:5789220/1‑140 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTAATCATGGGTCTATCAGGGAGCGGTa > 2:2127493/1‑140 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGGTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATAAGGGAGCGGTa > 2:5421491/1‑140 (MQ=255) | CTGTTTGTGTGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGG‑GAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTA > NZ_CP034943/316117‑316394 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |