BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	1,488,182	G→T	6.2%	A575S (GCA→TCA)	ade →	adenine deaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	1,488,182	0	G	T	6.2%	406.8 / 2.8	140	A575S (GCA→TCA)	ade	adenine deaminase
Reads supporting (aligned to +/- strand): ref base G (50/78); new base T (9/3); total (59/81)
Fisher's exact test for biased strand distribution p-value = 2.86e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 151 total aligned reads displayed.

CATGATAAATTGTTATTAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAATCTCATTTTTGA  >  NZ_CP034943/1488044‑1488320

cATGATAAATTGTTATTAGTCGGTTTCACATGCGGGTTTAATCCAATTTTGACGCTGTCGTTTTTATATTTGCCTGTAATTACTGACATCAAAATTAAGACAAAAGGATTATTTCTTTTAAAAACATTTCAGCATattgc                                                                                                                                            >  1:199472/1‑140 (MQ=255)

    aTAAATTGTTATTAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTGTTTATCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTTATGTAAAATAATTTCAGCATatttcattg                                                                                                                                        >  1:3914979/1‑140 (MQ=255)

      aaaTTGTTATTAGTGGGTTTCACAGGCGGTTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTCACATCAAAACGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATAttgcattgca                                                                                                                                      <  2:2300263/140‑1 (MQ=255)

      aaaTTGTTATGAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATAttgcattgca                                                                                                                                      <  2:1567567/140‑1 (MQ=255)

        aTTGTTATTAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTTAAATCAAAATGACGACAACAGGATTATTTTATGTAAAATCATTTCAGCATATTTCATTGCaaa                                                                                                                                    >  2:1267587/1‑139 (MQ=255)

          tGTTATTAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTTCATGTCATTACTGACATAAAAATGAAGACAACAGGATTAATTGATGTAAAATCATTTAAACATATTGCATTTAAATaa                                                                                                                                  >  2:3132000/1‑140 (MQ=255)

          tGTTATTAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTGTTTAGATTTTCCTGTCAATCCTGACATAAAAATGACGACAACAGGATTATTTTAAGTAAAAAAATTTAAGCAAATAGCAATGCAATaa                                                                                                                                  >  1:1072529/1‑140 (MQ=255)

           gTTATTAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATaaa                                                                                                                                 <  1:1719587/140‑1 (MQ=255)

            ttattaGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGGTTTGCCTGTAATTCCTGACATCAAAATGACGACAACAGGTTTTTTTGTTGTAAAATCATTTGAGCATAATTCATTTCAATaaaa                                                                                                                                >  1:1248334/1‑140 (MQ=255)

            ttattaGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTGTTTAGCTTTGCCTGTCATTCCTGACATCAAAAAGACGACAACAGGATTATTTGATGTAAAATAATTTCAGCAAATTTAATTGCAATaaaa                                                                                                                                >  1:1363018/1‑140 (MQ=255)

              attaGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTTCCTGTCATTCCTGACATCAAAAAGACTACAAAAGGATTTTTTGATGTAAAAAAAATTCAGCAAATTTACTTTCAaaaaaaaa                                                                                                                              >  1:4898353/1‑140 (MQ=255)

                 aGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTTGCGTTGGCTGTCATTCCTGACATCAAAATGAAGACAACAGGATTATTTTATGTAAAATAATTTCAGCAGATTGCATTGCAATAAAAAAAGa                                                                                                                           >  1:3685963/1‑140 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  1:4633108/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  1:3746000/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  1:1541814/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  2:2636076/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  1:814741/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  2:4243582/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  1:1732918/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTGTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  2:2823669/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTAGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTAATTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  2:1748455/140‑1 (MQ=255)

                  gTCGGTTTCACAGGCGGGTTTAATCAATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  1:5178664/140‑1 (MQ=255)

                  gTCGCTTTCAGAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGAt                                                                                                                          <  1:2747497/140‑1 (MQ=255)

                  gTCGCTTTCACACGCGGGTTTAATCCATTGTTGACCCTGTCGTATTTCGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATTTAAAATCATTTCAGCATATTGCATTTCAATAAACAAAGAt                                                                                                                          <  2:2938718/140‑1 (MQ=255)

                   tCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATg                                                                                                                         <  2:4834195/140‑1 (MQ=255)

                    cgttttCACAGGCGTGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTTTCATTCCTGACATCAAAATGAAGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGc                                                                                                                        <  2:3285319/137‑1 (MQ=255)

                    cGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGc                                                                                                                        <  2:1874430/140‑1 (MQ=255)

                    cGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGc                                                                                                                        <  2:474481/140‑1 (MQ=255)

                    cGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGACTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGc                                                                                                                        <  2:466545/140‑1 (MQ=255)

                    cGGGTTCCCAGGGGGGTTTAATCGATTTTGGACGCTGTCGTTTTTAGCTGTGGCTGTCATTCCTGACATCAAAATGACGACTACAGGATGATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGc                                                                                                                        <  2:2772037/140‑1 (MQ=255)

                      gTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTATCTTTTCCTGGCCATCCGGACAACAAAATTTAGACAACAGGATTATTTTATGTAAAATAATTTAAGCATATTGGATTGCAATAAAAAAATATGCAc                                                                                                                      >  1:5222271/1‑140 (MQ=255)

                      gTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCAc                                                                                                                      <  2:3739520/140‑1 (MQ=255)

                      gTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTGTTAGCGTTGCCTTTCATTACTGACATCAAAAATACGACAACCCGATTATTTGTAGTAAAAAAAATTAAGCATATTGGATTGCAATAAAAAAAGATTCAc                                                                                                                      >  1:1609869/1‑140 (MQ=255)

                        ttCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTc                                                                                                                    <  1:1477949/140‑1 (MQ=255)

                         tCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTcc                                                                                                                   <  2:1555863/140‑1 (MQ=255)

                            caGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAACTGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCaaa                                                                                                                <  1:1416537/140‑1 (MQ=255)

                              tgCGGGTTTAATCCATTTTTGACGCGGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAagt                                                                                                              <  2:2684082/139‑1 (MQ=255)

                                 gggTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATAAAAATGAAGACAACAGGATTATTTGATTTAAAAAAATTTCAGCATAATGCATTGCAATAAAAAAAGATGCACTCCAAagtgag                                                                                                           >  2:740972/1‑140 (MQ=255)

                                 gggTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCGGTCAATCCTGACATCAAAATGCCGACACCAGGTTTATTTGATGTAAATTAATTTCAGGATAATGCAATGCAATAAAAAAAGATTCCCTCCAAgctgag                                                                                                           >  2:2202933/1‑140 (MQ=255)

                                 gggTTTAATCCATTTTTGACGCTGTCGTGTTTAGCGTTGCCTGTCATTCCGGGCATCAAAATGTCGACAACTGGTTTATTTGATGTAAAATCATTTCAGCATTTTGGACTGCCATAATATGAGTTGGACTCCatcggggg                                                                                                           >  2:2929009/1‑133 (MQ=255)

                                        aTCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑t                                                                                                   <  1:4500673/140‑1 (MQ=255)

                                         tCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAGAGAt                                                                                                                          <  1:3466917/117‑1 (MQ=255)

                                             tttttGACGCTGTCGTTTTTAGATTTGGCTGTGATTCCTGACATAAAAATGACGAGAACAGGATTATTTGTTGTAAAATCATTTGAGCATATTTGATTGCAATTAATAAATATGGGATCCAAAGTGAGTGGATG‑tgtttt                                                                                              >  1:3222363/1‑140 (MQ=255)

                                             tttttGACGCTGTCGTGTTTTGCGTTTGCTGTCATTACGGACAACAAAATGACGACAACAGGATTATTTTATGTAAAATAATTTCAGCATATTTCATTGCAATAAAAAAAAATTCACTACAAAGTGATTTCATC‑tttttt                                                                                              >  1:569187/1‑140 (MQ=255)

                                                ttGACGCTGTCGCTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGCTGTAAAATCATTTCAGCATAGTGCATTGCACTAAAAAAAGATGCACTCCAAAGGGAGTGCATA‑TTTTTTTTa                                                                                           <  2:3318700/140‑1 (MQ=255)

                                                  gACGCTGTCGTTGTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTGGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTaaa                                                                                         <  1:3574332/140‑1 (MQ=255)

                                                   aCGCTGTCGTTTTTAGCTTTTCCTGTCATTACTGACAAAAAAATTACGACAACAGGATTATTTTATGTAAAATAAATTCATCAAATTTCAATTCAATAAAAAAAGATTCACACCAAAATGAGTGCATC‑TTTTTTTTaaaa                                                                                        >  1:429507/1‑139 (MQ=255)

                                                   aCGCTGTCGTTTTTAGCTTTGCCTTTCATTCCTGACATCAAAATTAAGACAAACGGATTATTTTATGTAAAAACATTTAAGCAAAATGCATTGCAAAAAAAAAAAATTAACTCCCAATTGAGTGGAAC‑ATTTTTTTaaaa                                                                                        >  1:1956608/1‑139 (MQ=255)

                                                          cGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCatg                                                                                 <  2:1971423/140‑1 (MQ=255)

                                                          agTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCatg                                                                                 <  2:5191871/139‑1 (MQ=255)

                                                                tAGCTTTGGCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATc                                                                           <  2:4602875/140‑1 (MQ=255)

                                                                tAGCGTGGCCTGTCATTCCTGACATCAAACTGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATCTTGCATTCCAATAAAAAAAGATGCACTCCAAAGTGAGTGCAAC‑TTTTTTTTAAACGTCCATGATGATc                                                                           <  2:2404628/140‑1 (MQ=255)

                                                                gaGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATc                                                                           <  2:3295657/139‑1 (MQ=255)

                                                                 ttcattGCCTGTCATTACTGCCATAAAAATTAAGACAACACGATTATTTGATGTAAAATCAATTCACCAAAATGCATTTCAATAAAAAAATATGAACAAAAAAGTAATGGCAAA‑ATTTTTTTAAAATTACATTATGATCg                                                                          >  2:4414213/5‑140 (MQ=255)

                                                                   cTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTTCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATG‑ATTTTTTTAAACTTCCATTATGATCggt                                                                        >  2:2623700/1‑139 (MQ=255)

                                                                   cTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGa                                                                        <  1:880043/140‑1 (MQ=255)

                                                                     ttGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAg                                                                      >  2:3554061/1‑140 (MQ=255)

                                                                      tGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCCAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAgg                                                                     >  1:426191/1‑140 (MQ=255)

                                                                       gCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATCTTTTTTTTTAAACTTCCATGATGATCGGAAgg                                                                     >  1:1208754/1‑140 (MQ=255)

                                                                             cATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCg                                                              >  1:2381941/1‑140 (MQ=255)

                                                                                      cATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgtt                                                     >  2:373481/1‑140 (MQ=255)

                                                                                      cATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATAGGAAGGATCATCGGACGGcgtt                                                     >  2:4309700/1‑140 (MQ=255)

                                                                                       aTCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAGAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgttt                                                    <  2:2724245/140‑1 (MQ=255)

                                                                                       aTCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgttt                                                    <  2:1045868/140‑1 (MQ=255)

                                                                                       aTCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgttt                                                    <  2:790919/140‑1 (MQ=255)

                                                                                       aTCAAAATGACGACAACAGGATTATTTGATGTAAAATCAGTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgttt                                                    <  2:3997074/140‑1 (MQ=255)

                                                                                          aaaaTGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgtttcgt                                                 >  1:2879987/1‑140 (MQ=255)

                                                                                          aaaaTGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgtttcgt                                                 >  1:4151086/1‑140 (MQ=255)

                                                                                          aaaaTGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGcgtttcgt                                                 >  1:5185478/1‑140 (MQ=255)

                                                                                               gacgacAACAGTATTATTTGATGTAAAATCATTTCAGCCTAGTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGtttttt                                            <  2:3815076/140‑1 (MQ=255)

                                                                                               gacgacAACAGGATTATTTGTTGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACGCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGtttttt                                            <  2:882539/140‑1 (MQ=255)

                                                                                               gacgacAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGGATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGtttttt                                            <  1:4856122/140‑1 (MQ=255)

                                                                                               gacgacAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGtttttt                                            <  2:4386391/140‑1 (MQ=255)

                                                                                               gacgacAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGtttttt                                            <  1:1019516/140‑1 (MQ=255)

                                                                                               gacgacAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGtttttt                                            <  1:2022380/140‑1 (MQ=255)

                                                                                                    aaacaGTATTATTTTCTGTAAAATCATTTCAGCATATTGCTTTGCAATAAAAAAAGATGCACTCAAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCatat                                       <  2:1179081/139‑1 (MQ=255)

                                                                                                     aacaGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCAttta                                      >  2:3399209/1‑140 (MQ=255)

                                                                                                         ggATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGaa                                  <  2:574197/140‑1 (MQ=255)

                                                                                                         ggATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGaa                                  <  2:2838116/140‑1 (MQ=255)

                                                                                                         ggATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGaa                                  <  2:1681302/140‑1 (MQ=255)

                                                                                                         ggATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGaa                                  <  1:3132000/140‑1 (MQ=255)

                                                                                                               tttGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGgcgc                            >  1:1612173/1‑140 (MQ=255)

                                                                                                               tttGATGTAAAATCATTTCAGCATATTGCAGTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTGTTGCATATAAGTACGgcgc                            >  1:1859335/1‑140 (MQ=255)

                                                                                                                   aTGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAATATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGc                        <  2:2508047/140‑1 (MQ=255)

                                                                                                                    tGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGCGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCg                       >  1:2208326/1‑140 (MQ=255)

                                                                                                                    tGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCCTC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCg                       >  1:187801/1‑140 (MQ=255)

                                                                                                                    tGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATCTTTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCTTTTCGTTTTTTCATATAAGAACGGCGCAAGc                        >  2:284313/1‑140 (MQ=255)

                                                                                                                    tGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCg                       >  1:5106094/1‑140 (MQ=255)

                                                                                                                     gTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCgt                      <  2:1370433/140‑1 (MQ=255)

                                                                                                                      tAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCgtg                     >  1:419656/1‑140 (MQ=255)

                                                                                                                              tttCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAATAACGGCGCAAGCGTGTCTGTAAt             >  1:243970/1‑140 (MQ=255)

                                                                                                                              tttCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAAt             >  2:3069965/1‑140 (MQ=255)

                                                                                                                                tcatcaTATTTAATTTCAATAAAAAAAGATGCACTCCAAAGTGAGTGAATG‑TTTTTTTTAAACTTCCATGATGATCGGAAGGTTGATCGTACTGCTTTTATTTTTTTGTTATAATAACGGCTCAAGCGTGTCttttatat           <  2:3495223/140‑8 (MQ=255)

                                                                                                                                tCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAAtct           >  2:1023494/1‑140 (MQ=255)

                                                                                                                                  aGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAATCTCa         >  2:4332626/1‑140 (MQ=255)

                                                                                                                                    cATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGAGTCTGTAATCTCAtt       >  1:3943717/1‑140 (MQ=255)

                                                                                                                                       attgcattgcAATAAAAAAAGATGCACTCCAAAGTGAGTGCATCTTTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAATCTCAtttt     >  2:4238655/1‑140 (MQ=255)

                                                                                                                                       attgcattgcAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAATCTCAttttt    >  2:1466108/1‑140 (MQ=255)

                                                                                                                                         tgcattgcaATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAATCTCATTTTTGa  >  1:3602132/1‑140 (MQ=255)

                                                                                                                                         tgcattgcaATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAATCTCATTTTTGa  >  1:2949965/1‑140 (MQ=255)

CATGATAAATTGTTATTAGTCGGTTTCACAGGCGGGTTTAATCCATTTTTGACGCTGTCGTTTTTAGCTTTGCCTGTCATTCCTGACATCAAAATGACGACAACAGGATTATTTGATGTAAAATCATTTCAGCATATTGCATTGCAATAAAAAAAGATGCACTCCAAAGTGAGTGCATC‑TTTTTTTTAAACTTCCATGATGATCGGAAGGATCATCGGACGGCGTTTCGTTTTTTCATATAAGAACGGCGCAAGCGTGTCTGTAATCTCATTTTTGA  >  NZ_CP034943/1488044‑1488320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`