| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,270,057 | A→C | 10.8% | V41G (GTT→GGT) | prsW ← | glutamic‑type intramembrane protease PrsW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,270,057 | 0 | A | C | 10.8% | 546.5 / 8.9 | 251 | V41G (GTT→GGT) | prsW | glutamic‑type intramembrane protease PrsW |
| Reads supporting (aligned to +/- strand): ref base A (82/129); new base C (2/38); total (84/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.48e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 260 total aligned reads displayed.
GACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCTT > NZ_CP034943/2269924‑2270196 | gACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTa > 2:2640322/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAATGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTGATGCACGTCCTGGATAAACA‑TTGTGGG‑AAATACAAATACAACACCTAg > 2:3184218/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTCCTGGATAAACA‑TTGTGTG‑AAATACAAGAACAACCCCtcg > 1:2778700/1‑138 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑CAATACAAGAACAACGCCTAg > 1:3509574/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAg > 1:946922/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGAAAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCATGCACGTACTGGATAAACA‑TTGTGGG‑ACATACAAGAACACGCCCTAg > 2:4657483/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAATAAAGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAAACCCAAGaaaaa > 2:3207107/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGaaaaa > 2:214891/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGaaaaa > 2:1428214/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGaaaaa > 2:1933526/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGaaaaa > 1:3684142/1‑140 (MQ=255) taaTAAACCATTTTAATTATTCCACAAAAAACCATTAAGATAAAAAATAAACTAAAACGCTTCCGCCTCCCACATTCTCTTTTTAAAGAACGTACTGTATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAacac < 2:3081913/139‑1 (MQ=255) gattAAATCATTTTAATTATTAGTCCAAAAACCGTGAACTTAATAATCAACCTAAAAAGCTTCCGCCTCCCAATTTGTCTTTTTCAACCAGGTACTGTATATACT‑TTGTGTG‑AATTACCATAAAACCCCCTAGAAAAAAc < 2:2232294/137‑1 (MQ=255) aaTAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACg > 2:1794216/1‑140 (MQ=255) tAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTCCTGGATAAACA‑TTGTGGG‑AAATACAAGAACCACCCCTAGAAAAAACGAc > 1:1555632/1‑140 (MQ=255) tAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGAc > 1:1642444/1‑140 (MQ=255) tAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGAc > 1:273378/1‑140 (MQ=255) tAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGAc > 1:588919/1‑140 (MQ=255) aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGa > 1:2580411/1‑140 (MQ=255) ccATTTTAATTATTCATCCAAAAACCCTGAAGATAAAAAAGAACCGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCACGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGaa < 2:2398054/140‑1 (MQ=255) aaTTTTAATGATTCCTCAAAAAACCCTTAATATAAAAAATAAACGAAAAAGCTACCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTACAAAAAACGACCGAAg < 2:4178411/139‑1 (MQ=255) aatttAATGATTCCTCCAAAAACCATCAATATAAAAAAGAAACGAAAAAGCTTCCGCCTCCAACATTCTCTTTTTCAAGCACGTACTGGATAAACT‑TTGTGGG‑AAATACAAGAACACCCCCTAGAAAAAACGACCGAAGc < 2:3362100/138‑1 (MQ=255) aTTTTCATGATTCCTCCAAAAACACTTAATATAAAAAATAAAGGAAAAAGCTTCCGCCTCCAACTTTCTCTTTTTCAAGCACGTACGGGATAAACA‑TTGTGGG‑AAATACAATAAAAACCCCGACAAAAAACGACCGAAGc < 2:2260972/140‑1 (MQ=255) aTTTTATTGTTTCCTCCAAAAACCCTGAAGATAAAAAAGAAACCAAAAAGGTTCCGCCTCCAAAATTCTCTTTTTAAAGCACGTACTTGATATACA‑TTGTGGG‑AAATTCAAGACCAACCCCTAGAAAAAACGACCGAAGc < 2:2473825/140‑1 (MQ=255) aTTTTAATTATTCCACAAAAAACCCTGAAGATAAAAAACAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTTTGGG‑AAATCCAACAACACCCCCTATAAAAAACGACCGAAGc < 2:205403/140‑1 (MQ=255) aTTTTAATGATTCCTCAAAAAACCCTTAAGATAAAAAATAAACGAAAAAGCTTCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTTTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:791081/140‑1 (MQ=255) aTTTTAATGATTCCTCAAAAAACCCTCAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCAACATTCTCTTTTTCAAGAACTTACTGGATAAACC‑TTGTGGT‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:3671135/140‑1 (MQ=255) aTTTTAATGATTCATCAAAAAACCCTGAATATAAAAAAGAAACTAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTACAAAAAACGACCGAAGc < 2:478464/140‑1 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAATAAAAAAAAGAAACGAAAACGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGACCAACCCCTAGAAAAAACGACCGAAGCAc < 2:961206/140‑1 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAATAACAACCCCTAGAAAAAACGACCGAAgacc > 1:4789397/1‑137 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 2:3287439/1‑140 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 2:4308532/1‑140 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 1:3866900/1‑140 (MQ=255) tttAATGATTCCTCCAAAAACACTGAAGATAAAAAAGTAACGAAAAAGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAAAAACCACTAGAAAAAACGACCGACGCaa > 1:2428042/1‑139 (MQ=255) ttATTGATTCCCCCACAACCCCTGAATCTAAAAAACAAACCAAAACGCGCCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACT‑TTGTGGT‑AAATCCAACAACAACCCCTACAAAAAACGACCGAAGCAcc < 1:4298929/140‑1 (MQ=255) ttAATGATTCCTCCAAAACCCGTTAACATAAAAAAGAAACCAAAACGCTTCCGCCTCCCACATTATCTTTTACAAGCACGTACTGGATAAACA‑TTGGGGT‑AAATCCACCAACACCCCCTAGAAAAAACGACCGAAGCAcc < 1:3119290/140‑1 (MQ=255) ttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGT‑AAATACAACAACAACCCCTAGAAAAAACGACCGAAGCAcc < 2:2357454/140‑1 (MQ=255) ttAATGATTCATCCAAAAACCGTGAAGATAAAAAAGAAACCAAAAAGCTTCCGCCACCCACATTCTCTTTTTCAAGCACTTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCAcc < 2:3591789/140‑1 (MQ=255) aagtaTTCCACCAAAACCCAGGAAGACAAAAAACAAACCAAAACCCTCCCGCCTCCCACATTCTCTTTTACAAGCACGTACTGTATAAA‑A‑TTGGGGGTAAATACAAGAACACCCCCTATAAAAAACGACCGAAGCACCat < 1:4071683/136‑1 (MQ=255) aaTGATTCCTCCAACAACCCTTAAGATAAAAAATAAACGAAAAAGCTTCCGCCTCCAAAATTCTCTTTTTCACGCACGTAGTGGATAACCT‑TTGTGGT‑AAATCCAAGAACACCCCCTAGAAAACACGACCGAAGCACCat < 2:345160/140‑1 (MQ=255) gATTCCTCCAAAAACCCTGAAGATAAAAGAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATg > 2:4395093/1‑140 (MQ=255) aTTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGt > 2:3755221/1‑140 (MQ=255) tcctcaAAAATCCCTGTATATATAAAATAAAGTATAATGCTTCCGCCTCCGATATTATTTTTTTAAAGCACGTACTGTATTAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGATAAAACGACCGAAGCACCATATGTAc < 2:3786214/140‑1 (MQ=255) cAAACACCCGTAACATAAAAAACAAACGAAAAAGCGTCCGCCGCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGT‑AAATACAACAAAAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:4043630/140‑1 (MQ=255) cAAAACCCCTTAAGATAAAAAAGAAACGAAAACGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACACCCCCTAGAAAAATCGACCGAAGCACCATATGTACAGGtt < 2:1287847/140‑1 (MQ=255) cAAAAACCCTTAATATAAAAAACAAACTAAAAAGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:828979/140‑1 (MQ=255) cAAAAACCCTTAAGATAAAAAAGAACCTAAAAAGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACGTACTGCATAAACA‑TTGTGGT‑AAATACAACAACAACCCATACAAAAAACGACAGAAGCACCATATGTACAGGtt < 2:1045389/140‑1 (MQ=255) cAAAAACCCTGAATATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACGTACTGTATAAACA‑TTGTGGG‑AAATACACGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:1149242/140‑1 (MQ=255) cAAAAACCCTGAACATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAATGGATAAACA‑TTGTGGT‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:4218454/140‑1 (MQ=255) aaacaaCCCGAAAAATAAAAAAAAAACCAAAAAGCTCCCGCCTCCAAAATTCTATTTTTCAAGCCCGTAC‑GGTAAAACACTTGTGGG‑AAATACAACACCACCCCCTCAAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:1756810/136‑1 (MQ=255) aaaacaCCCTGAAGATAAAAAACAAACGAAAAAGCTTCCGCCTCCAACATTCTCTTTTTCAAGAACGTACTGGATAAACA‑TTTTGGT‑AAATACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:698828/139‑1 (MQ=255) aaaaaaCCCTTAATATAAAATAAAAACTAAAAAGCTGCCGCCACCCAAATTCTATTTTTAAAGCACTTAGTGTATAAACT‑TTGTGGT‑AAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:4395093/139‑1 (MQ=255) aaaaaaCCCTTAATATAAAAAAAAAAACAAAAAGCTCCCCCCTCCCAATTTATATTTTACAAGCACTTACTGTATAAAAT‑TTTTGGT‑AAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:2157354/139‑1 (MQ=255) aaaaaaCCCTTAACAAAAAAAACAAACCAAAACGCGCCCCCCTCCCACTTTCTCTTTTTCAAGCACGTACTGTATAAACT‑TTGTGGT‑AAATACACCAACACCCCCTACAAAACACGACCGAAGCACCATATGTACAGGtt < 1:106266/139‑1 (MQ=255) aaaaaaCCCTCAATATAAAAAACAAACCAAAAAGCTCCCGCCACCCAAATTCTCTTTTTCACGCACGTACTGTATAAAAA‑TTGTGGT‑AAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:3622277/139‑1 (MQ=255) aaaaCCCTTAATATAAAAAACAAACTAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAACAA‑TTGTGGC‑AAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCa < 2:1585963/140‑1 (MQ=255) ccccTTAATATAAAAAAGAAACGAAAAAGCTTCCCCATCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATAAAAGAAAAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 2:2501503/139‑1 (MQ=255) aCCCTTAATATAAAAAATAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTATAAACA‑TTGTGGG‑AAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 1:4447052/140‑1 (MQ=255) aCCCTGAATATAAAAAATAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 2:1551976/140‑1 (MQ=255) caaaCCAAAAAGCTTCCGCCTCCCACATTCTATTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTACAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaa < 1:2487732/139‑1 (MQ=255) aaCGAAAACGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACTTACGGTATAAAAT‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaat < 2:311060/140‑1 (MQ=255) gAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTTTAAACA‑TTGTGGT‑AAATAAAACAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 2:1076558/140‑1 (MQ=255) caaaaaGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACGTACTGTATAAACT‑TTGTGGG‑AAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 2:3340371/139‑1 (MQ=255) aaacGCTTCCGCCTCACACATTATTTTTTTAAACCACTTAGTGTAAAACCT‑TTTTGTT‑AAATAAAATAACAACCCCTATAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTaaataaaaa < 1:291735/140‑1 (MQ=255) ccGCCTCCCAATTTCTCTTTTTAAAGCACGTACTGGATAAACT‑TTGTGGT‑AAATACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTaa < 1:2895108/140‑1 (MQ=255) ctccTCCCATATTATCTTTTTCAAGCACGTACTTGTTAAAAA‑TTGTGGT‑AAATACAATAACAACCCGTATAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAAc < 2:92910/138‑1 (MQ=255) cccACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAgcgc > 1:1790934/1‑140 (MQ=255) cccACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAgcgc < 2:946922/140‑1 (MQ=255) ttCTCTTTTTAAAGCACGAACTGGATAAACT‑TTGTGGG‑ATATACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc < 2:4961241/140‑1 (MQ=255) ttCTCTTTTACAAGCACGTCCGGTATAACCA‑TTGTGGG‑AAATACACGAACACCCCCTACAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc < 1:874355/140‑1 (MQ=255) tctTTTTCAAGCACTTACTGGATAAAAA‑TTGTGGC‑AAATACAACAAAAACCCATACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCggg < 1:1854464/140‑1 (MQ=255) ttttCAAGCACGTACTGTATAAACA‑TTGTGGG‑AAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGc < 2:1743233/140‑1 (MQ=255) ttttCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGc < 2:1627288/140‑1 (MQ=255) ttttCAAGCACGTAATGTATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGc < 2:4063529/140‑1 (MQ=255) taaaGCACTTACTGCATAAACA‑TTGTGGT‑AAATACAACAACAACCCCAACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt < 1:1966555/138‑1 (MQ=255) tCAAGCACGTACTGGATAAACA‑TTGTGGT‑AAATACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt < 1:3278618/140‑1 (MQ=255) tCAACCACGTACTGTATAAACA‑TTGTGGG‑AAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt < 1:2242255/140‑1 (MQ=255) cACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTg < 2:545133/140‑1 (MQ=255) cACGTACTGGATAAACA‑TTGTGGG‑AAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTg < 2:273378/140‑1 (MQ=255) cGTCCTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACAATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCa < 2:2796941/140‑1 (MQ=255) cGTACTGGATAAACT‑TTGTGGG‑AAATACAAGAACAACCCCTATAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCa < 2:4419491/140‑1 (MQ=255) cGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCa < 2:3866900/140‑1 (MQ=255) gATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCAAACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAgatga > 2:3493549/1‑140 (MQ=255) tAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGAtt > 2:4609375/1‑140 (MQ=255) aCA‑TTGTGGT‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa < 1:1219708/140‑1 (MQ=255) aCA‑TTGTGGG‑AAATAAAACCACAACCCCTAGAAAAAACGACCGCAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACCGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa < 1:813786/140‑1 (MQ=255) ttGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAAc > 1:983808/1‑140 (MQ=255) tgtgGC‑AAATACAAGAACAACCCCTACAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACa < 1:722387/140‑1 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGATCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:3006662/1‑140 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa > 1:1487812/1‑85 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 2:1487812/85‑1 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:4719805/1‑140 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 2:5069027/1‑140 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 2:2705435/1‑140 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:1903786/1‑140 (MQ=255) gtgGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:4585672/1‑140 (MQ=255) aaaTACAAGAACAACCCCAAGAAAACACGACCGAAGCACCAAATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATACCTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAACAGGc < 2:4892707/140‑1 (MQ=255) aGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct < 2:3695232/140‑1 (MQ=255) aacCCCTATAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGACGATTGCAAACATCAGGCAACCTCTTTCCt < 2:202473/140‑1 (MQ=255) acCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCtt > 1:502284/1‑140 (MQ=255) | GACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACA‑TTGTGGG‑AAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCTT > NZ_CP034943/2269924‑2270196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |