| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 135,117 | G→T | 6.5% | intergenic (+164/‑74) | EO946_RS00715 → / → rpsJ | alpha/beta hydrolase/30S ribosomal protein S10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 135,117 | 0 | G | T | 6.5% | 1083.8 / 8.1 | 451 | intergenic (+164/‑74) | EO946_RS00715/rpsJ | alpha/beta hydrolase/30S ribosomal protein S10 |
| Reads supporting (aligned to +/- strand): ref base G (206/196); new base T (47/2); total (253/198) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.90e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 457 total aligned reads displayed.
CACCTGTATAATAAAAAAAGTGTGCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCA > NZ_CP034943/134978‑135256 | acCTGTATAATAAAAAAAGTGTGCAAACCATGAATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGc < 2:565795/140‑1 (MQ=255) tataATAAAAAAAGTGTGCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCCTgg > 1:2466300/1‑140 (MQ=255) tataATAAAAAAAGTGTGCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATgg > 1:3928699/1‑140 (MQ=255) ataaAAAAAGTGTGCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCaca > 2:4546165/1‑138 (MQ=255) taaAAAAAGTGTGCAAAAAATGCATAATTTAAATAAGTCTTGCAACATAAGTATATTTTCTGTATAATGTTGTATGTTGTTCTTTGACTGCGATGAAGTGAGAGGTTGCTGAAACAAACGGCAGC‑TTTTACATGGCAAAg > 2:1037210/1‑140 (MQ=255) aaaaaaGTGTGCAAACCATGCATAGTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGgt > 2:3955416/1‑140 (MQ=255) aaaGTGTGCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGtt > 2:745596/1‑140 (MQ=255) tgCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTgg > 1:3128140/1‑118 (MQ=255) tgCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGc < 2:3128140/119‑1 (MQ=255) tgCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGtt > 2:3646112/1‑140 (MQ=255) aaacATGCATATTTTAAATAAGTCTTGCAAAATACGTATATTTTCTGTAGAATGTTGTATGTTGTTCTTTGACTGCGATGAAGTGAGATGTTGCTGACACACCCGGCCGC‑GTTGCCATGGCAAAGGTGTTCAGGTTTTtc < 2:4326912/137‑1 (MQ=255) aaCCATTCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTTTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTtc < 2:5166803/140‑1 (MQ=255) aaCCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTtc < 1:3812842/140‑1 (MQ=255) tGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACg < 1:4410050/140‑1 (MQ=255) atatTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGgag < 2:3984232/140‑1 (MQ=255) atTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGaa < 1:59069/140‑1 (MQ=255) atTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGaa < 2:3209007/140‑1 (MQ=255) atTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGaa < 1:1234240/140‑1 (MQ=255) atTTTAAATAAGTCGTGCAACATACGTCTATTTTCTGTATAAGGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGaa < 2:3442014/140‑1 (MQ=255) agtttAAATAAGTCTTGCAACATACGTCTATTTTCGGTATAATGGTGTATGATGGTCTTTGACTGCGATGAAGTGAGAGGGTGCTGACACACCCGGCCGC‑ATTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGaa < 1:466885/138‑1 (MQ=255) ttttAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTCCATGGCAAAGTTTTTCAGGTTTTTGTCAAGGTGaaa > 1:5089547/1‑139 (MQ=255) tttAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACt > 2:121529/1‑140 (MQ=255) ttAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATTAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCTTGTCAAAGGTGTTCAGGGTTTTATCACGGAGAACTg > 2:1885941/1‑140 (MQ=255) ttAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTCCATGGCAAAGGTGTTGAGGTTTTTGTCAAGGGGAAcag > 1:1556548/1‑138 (MQ=255) aaaTAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCCAAGGTGTTCAGGTTTTTATCACGGAGAACTGTc > 1:4055936/1‑140 (MQ=255) ttGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTCCCTTGCAAAGGGTTTGAGGTTTTTATCACGGAGAAATGTCTAACTTTAt > 1:1768917/1‑140 (MQ=255) gCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCCTGGCCAAGGTGTTCAGGTTTTTATAACGGAGAACTGTCTAACTTGATGt > 1:3189220/1‑140 (MQ=255) gCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCCTGGCACAGGTGTTCAGGTTTTTGTCACGGAGACATGTGTAACTtgttgt > 1:2986834/1‑140 (MQ=255) gCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGt < 1:3841864/140‑1 (MQ=255) tACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCCACGGTGTTGAGGTTTTTCTGACGGAGAACTGTCTAACTTGATGTAGGCGa > 1:493920/1‑140 (MQ=255) tACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTGTGACGGAGAACTGTGTAAGTTGATGTTTGCGa > 1:2190975/1‑140 (MQ=255) cTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAagg > 2:151363/1‑140 (MQ=255) ttttCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTGCATGGCAAAGGTGTTCAGGTTTTTGTCACGGAGTACTGTCTAACTTGATTTATGCGAAAaggagg > 1:5186953/1‑140 (MQ=255) ttttCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTCCATGGCAAAGGTGTTGACGTTTTTATAAACGAGAACAGTCTAAAATTATGTAGTCGAAAaggagg > 1:2804799/1‑140 (MQ=255) ttttCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGACATTGCAAAGGTGTTAACGTTTTTCTAACGGAGTACGGGCGAACTTGATGTACGCGAAAaggagg > 1:4254277/1‑140 (MQ=255) ttttCTGTATAATGGGGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCGTGGCAAACGTGTTGAGGTTTTTATCACGGAGAAATGTCGAACTTGATGTAGGCGAACaggatg > 1:2373349/1‑138 (MQ=255) tttCTGGATAATGGTGTTTGTTGGTCTTTGACTGCGATGAAGGGAGAGGTTGCTGACACACCCGGCCGC‑TTTGTCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAggg < 2:3599629/140‑1 (MQ=255) tttATGTATAAGGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCAATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAggg < 1:2250348/140‑1 (MQ=255) tCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCGTTTGCC‑TGGCCAAGGTGTTGAGGTTTTTATCACGGAGCACTGTCTAAAATGATGGATGCGAAAATGAgggca > 1:792660/1‑138 (MQ=255) tGTATAATGGTGTATGTTGTTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑GTTTCCAAGGCAAATGTGTTAAGGTTTTTATAACGGATAAATGTCTAACTTGATGTATGCGAAAaggaggtcaaa > 1:3241895/1‑135 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAAATTGATGTAGGCGAAAAGGAGGGAAaata > 2:4888946/1‑140 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACAGTCTAACTTGATGTAGGCGAAAAGGGGGGAAaata > 1:3699564/1‑140 (MQ=255) tGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATTGCAAATGTGTTAAGGTTTTTATCACGGAGAACTGTCTAAATTGATTTAGGCGAAAACGAGGGAAAATAAAGGc > 1:3591161/1‑140 (MQ=255) tGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGc < 1:1988176/140‑1 (MQ=255) tGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTAACCGAGAACTGTCTAACATGAAGTAGGCGAAAAGGAGGGCAAATAATGGc > 1:2738768/1‑140 (MQ=255) gtgtATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGcaa < 2:3378453/140‑1 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTCCATGGCAAAGGGGTTGAGGTTTTTATAACGGAGAACAGTGTAACATGATGTAGGGGAAAATGAGGGAAAAAAATGGcaaaac > 1:741255/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCCTGGCCAAGGTGTTGAGGTTTTTATGACCGAGTACTGTCTAACTTGATGTAGGCGCAAATGAGGGAAAAAAATGGcaaaaa > 1:886703/1‑139 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCCAAGGTGTTCAGGTTTTTATAACCGGGAAATGTATAACTTTATGTAGGCGAAAAGGAGGGAAAATAATTGcaaaaa > 1:1022084/1‑139 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTGTCACGGAGAAAAGTCTAACATGATGTAGGCGAAAAGGAGGGAAAAAAATTGcaaaac > 1:134665/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGCGAACTGTCTAACTTTATGTAGGCGAAAACGAGGGAAAATAAAGGcaaaac > 1:4159704/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGcaaaac > 2:2177863/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGcaaaac > 2:2439076/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACGGTCTAACTTGCTGTAGGCGAACAGGAGGGAAAAAAATGGcaaaac > 2:1713986/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTATCACGGAGAACTGTCTAACATGATGTATGGGAAAAGGAGGGCAAAAAATGGcaaaac > 1:4745270/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAACGTGTTAAGGTTTTTATCACGGAGAAATTTCTAAAGTGATGTAGGGGAAAATGAGGGAAAATAATTTcaaaaa > 1:1068178/1‑139 (MQ=255) tGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTCCAAGGCAAAGGTGTTGAGGTTTTTGTAAAGGAGAAATTTATAACTTTATGTATGCGAAAAAGAGGGAAAATAATGGCAAAACaaaaa > 1:2579471/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTGCATGGCAAAGGTGTTCAGGTTTTTATCACGGCGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAAAGGCAAAACaaaaaaa > 1:2892575/1‑139 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCCATGCAAAGGTGTTGAGGTTTTTCTAACGGCTAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATTGCAAAACaaaaaaa > 1:4793377/1‑139 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCa < 1:3355565/58‑1 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAATGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAAAGTGATTGAGGCGAAAACGAGGGAAAAAAAAGGCAaaaaaaaaaaa > 1:3862608/1‑139 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCAAGGCAAAGGTGTTGAGGGTTTTGTCACGGAGAACAGTCTAACTTGAGTTAGGGGAAAAGGAGGGAAAATAATGGCAAAAAAAAAAat > 1:3417342/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑GTTGCCATTGCAAACGTGTTCAGGTTTTTATGAACGAGAACAGACTAACTTGTTGTAGGCGAAAAAGAGGGACAATAATGGCAaaaaaaaaaaa > 1:4582050/1‑139 (MQ=255) tCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTTGCATGGCAAAAGTGTTCAGGTTTTTCTGACCGCGAAATGTCTAACAGTAAGTAATAGAAAAGCAGGGAAAAAAAAGGCAAAACaaaaaaat > 1:1498921/1‑138 (MQ=255) tCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCCTGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCAGACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAatt > 2:3905045/1‑140 (MQ=255) tCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTGTAAAGGAGAAAAGTCTAAATTGATTTAGGCGAAAATGAGGGAAAATAATGGCAaaaaaaaaaaat > 1:1458466/1‑138 (MQ=255) tttGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAattcg > 2:4264458/1‑140 (MQ=255) tttGACTGCGAGGAAGGGAGAGGTTGCTGACACACCCGGCCGC‑TTTGGCATGGCAAAGGTGTTCCGGTTTTTATCACTGCGTACTGGCTGAACTGGTGGAGGCGACAAGGAGGGAAAATAAATGCAAAACACAAAaatcg > 1:1162871/1‑140 (MQ=255) tGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑GTTTACAGGGGAAATGTGTTGATGTTTTTATAACGGAGAAAACTATAAAATGATGTATGCGAAAAGGTCTGAAAAAAAAGGCAaaaaaaaaaaatacta > 1:3332047/1‑134 (MQ=255) tcTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACTGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAattcgtatt < 2:1312760/139‑1 (MQ=255) tcTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAattcgtatt < 1:676244/139‑1 (MQ=255) cGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGCGAACTGTCTCACTTGATGTGGGCGCACCGGAGGGAAAATAAAGGCCAAAGACAAAaatcgtagtcgag > 2:2977091/1‑138 (MQ=255) cGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAAATTGATTTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGtt > 2:2389985/1‑140 (MQ=255) tGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGa < 1:3961125/140‑1 (MQ=255) tGAAGAGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGa < 2:3747211/140‑1 (MQ=255) agagGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCata < 1:1670257/140‑1 (MQ=255) ggTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGa < 2:4986625/140‑1 (MQ=255) ggTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGa < 2:163357/140‑1 (MQ=255) ggTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCACGAATTTCTCACGGAGAACTGTCTAACTAGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATACCTAATCGATTGAAAGCATATGa < 1:2089927/140‑1 (MQ=255) ggTGGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGa < 2:4047673/140‑1 (MQ=255) gCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCAt > 2:4471756/1‑140 (MQ=255) gCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCAt > 2:1436089/1‑140 (MQ=255) gCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAAATCGTATTCGTTTGAAAGCATATGATCaa > 2:2813040/1‑139 (MQ=255) gCTGACACACCCGGCCGC‑GTTTCCCGGGCACAGGTGTTCAGGTTTTTATCACGGAGAACTGTCTAACGTGTTTTAGGCGAAAAGGGGGGGAAATAATGGCAAAAAAAAAAATTGGTATTCGTTTGAAACAatattttaat > 1:3080766/1‑134 (MQ=255) atGACACACCCGGCCGC‑TTTGCCATGGCAAATGTGTTCAGGTTTTTCTCACGGATAACTGTCTAAATTGGTGTAGGCGAAAAGGAGGGAAAATAAAGGCAAAACAAAAAATTCGTCTTAGTTTGAAATCATAAGTTCATa > 2:4168650/2‑140 (MQ=255) tGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAg < 1:2410719/140‑1 (MQ=255) acCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGCAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCt > 2:1596940/1‑140 (MQ=255) acCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTATCACGGAGAACTGTGTAACTTGATGTAGGCGCAAAGGAGGGAAAATAATGGCAAAAAAAAAAAATCGTATTAGTTTGAAAGCATAATTTCATAAAATACt > 2:2077981/1‑140 (MQ=255) ccGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGCGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAAAAATGGCAAAAAAAAAAATTCGTATTCGTTTTTAACCATATGATCATAGAATCCTTg > 2:1773566/1‑140 (MQ=255) cGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTTATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGa < 2:3298971/140‑1 (MQ=255) gCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATc < 2:4753762/140‑1 (MQ=255) gCCGC‑TTTGACATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATc < 2:5123860/140‑1 (MQ=255) ccGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCa < 2:4113491/140‑1 (MQ=255) ccGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGAACa < 2:2485171/140‑1 (MQ=255) ctc‑TTTGCCATGGAAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAAC‑AAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAAt < 2:2930168/138‑1 (MQ=255) cGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCaa < 1:3999900/140‑1 (MQ=255) gC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAAt < 1:1728907/140‑1 (MQ=255) gC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAAt < 2:2654300/140‑1 (MQ=255) gcgttGCCATGGCAAAGGTGTTCAGGTTTTTCGCACGGAGAACTGTCTTACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGCTTGAAAGCATATGATCATAGAATCCTTGATCAAt < 2:1101112/137‑1 (MQ=255) tttGGCATGGCAAAGGTGTTCAGGTTTTTATCACGGAGACCTGGATAACTTGATGTAGGCGAAAAGGAGGGCAAATAATGGCAATACAAAAAATTCGGAGTGGTTTGAAATCAGAAGATCATAGAATCCAAGATCAATCt > 2:671588/1‑140 (MQ=255) | CACCTGTATAATAAAAAAAGTGTGCAAACCATGCATATTTTAAATAAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGC‑TTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCA > NZ_CP034943/134978‑135256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |