| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,996,857 | C→A | 6.6% | intergenic (‑163/+43) | purA ← / ← EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,996,857 | 0 | C | A | 6.6% | 636.9 / 7.3 | 244 | intergenic (‑163/+43) | purA/EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Reads supporting (aligned to +/- strand): ref base C (101/118); new base A (2/22); total (104/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 262 total aligned reads displayed.
TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCT > NZ_CP034943/3996718‑3996994 | tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:2322948/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:268958/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:2776284/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCGTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:136358/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTAGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTGATCGCATTGTcc > 1:4196075/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACAGTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:4102481/1‑140 (MQ=255) gATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAg > 2:2468479/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAATGCTCGTGa > 2:3639495/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:4385277/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 1:2978629/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 2:2154539/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:2683137/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:3605798/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 1:940859/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 1:2327640/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 1:4974466/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:1635651/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 1:4816512/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGATTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:369493/140‑1 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAATTTATTGTAAATCTATATTCGTTCGCTTCCATTCGTTTTATAAGCGTTTTCTCACTGCTTTGTCATAAAAATCTTGCGAAACtt > 2:3063205/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACATGCGTTTTCTCATCGCATGGTCCTCAAAAGCTCGAGAACCtg > 1:4374331/1‑139 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:569704/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:4732516/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTACATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:2082682/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc > 2:78960/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc < 1:3473318/140‑1 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc > 1:831139/1‑140 (MQ=255) tCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCAc > 1:1413768/1‑140 (MQ=255) tGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaa > 2:1755619/1‑140 (MQ=255) tGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaa > 1:1759338/1‑140 (MQ=255) gaagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaa > 2:2887987/1‑140 (MQ=255) gaagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaa > 2:2865282/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaaa > 1:1291842/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTAGTTCGCTTCCATTCGTTTTAGAAGCGATTTCTCAACGCATTGTCCTAAAAAGATCGTGAAACTTTTATCCTTTCGCACGataaa > 2:3891909/1‑140 (MQ=255) aGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAc < 2:761289/140‑1 (MQ=255) aGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAc < 2:374047/140‑1 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt > 2:5122671/1‑140 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACtt < 2:3362677/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACtt < 2:569045/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACtt < 2:4988733/140‑1 (MQ=255) aGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGc > 1:3459472/1‑140 (MQ=255) aGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGc < 1:1913967/140‑1 (MQ=255) aaTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 1:1936212/140‑1 (MQ=255) aTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGat < 2:1179953/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 2:2344152/140‑1 (MQ=255) aaCATTAAATTAATTTAAATCATTATTCGTTCGCTTCCATTCTTTTTACAAGCGTTTTCTAATCGCATTGTACTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGACTGATATCCCTTTTG‑Ta < 2:4363918/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑Ta < 1:4763924/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑Ta < 1:2620245/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑Ta < 1:2456604/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTGTG‑Ta > 1:4035714/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCATTTAGCACGaa > 2:4141675/1‑109 (MQ=255) attaaattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTc < 2:3962113/140‑1 (MQ=255) taaattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTa < 1:3558441/90‑1 (MQ=255) taaattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTa > 2:3558441/1‑90 (MQ=255) attttAAATCAATTTTGGTTCGTTTCATTTCGTTTTACATGCGTTTCATCTGCTCATTTTGCTAAAATGCTCGTGAAACTTTTATCCTTTAGCACCAAAAAGAGTTACTTGCCTTATATCCTTTTTT‑TATTAATAAAAAc < 2:3521734/136‑1 (MQ=255) aTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACg > 2:1689537/1‑140 (MQ=255) aTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATACCTTTTG‑TATTCATAAAAACg > 2:1395384/1‑140 (MQ=255) tttAAATCAATATTCGTTCGCTTCCATTCTTTTTACAAGGGTTTTCTCTTCGAATTGTCCTAAAATCGTCGTCAAACTTTTAGCCTTTCCCACGAAAAAGAGTTACTTGCCTTATATCCCTTTTG‑TTTTCATAAAAACGa < 2:1928353/138‑1 (MQ=255) ttcaaataaatTTTCTTTCGCTTCCATTCTTTTAACATGCTTTTTCTAATGGCTGTGTCAAAAAAAGCTGGTTAAAATTTTATCCTTTAGCACTAAAAATATTTAGTTGCCTGTTATCCCTTTTG‑TATTCATAAAAACGa < 2:4198863/137‑1 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGa > 2:3232459/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGa > 1:1132186/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGa > 2:2048225/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGa > 1:3373243/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGa > 1:3665295/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCATTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGa > 2:5196363/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCGTAAAAAGCTCGTGAAACTTGTATCCTTTAGCACGAAACAGAGTTACTTGCCGGATATCCCTTTGG‑TATTCATAAAAACGACTCGc > 1:3135165/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGc > 1:3204382/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGc > 1:871020/1‑140 (MQ=255) acgtccgCTTCCATTCTTTTTAAAAGCTTTTTATATTCGATTTTTCATAAAACGCTCTTGAAAATTTTATCCTTTAGCACTAAAAATAGTAACTTGCGTTATATCCCTTTTT‑TAATCAAAAAAACGACTCGCCAACCGTc < 1:5061263/139‑1 (MQ=255) cgttggTTTCTATTCTTTTTAAAAGCTTTTTATCATCGATTTGTCAAAAAAAGATCGTTAAAATTTTATCCTTTACAACTAAAAATTTTTATTTGCTTTATATCCTTTTTT‑TATTAAAAAAAACGACTCGCCAACCGTcc < 1:1900187/140‑1 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTcc > 1:2886645/1‑140 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTcc > 1:251493/1‑140 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTcc > 1:76570/1‑140 (MQ=255) gCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAAc < 2:3631267/130‑1 (MQ=255) ttcatttCTTTTTACAAGCGTTTTCTCATCGCTGTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTACCACTAAAACTAGTTAGTTGCCTTATTTCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCct < 2:3156176/135‑1 (MQ=255) ttCCATTCGTTTTACATTCTTTTTCTCATCGCATTGTCCTAAAAAGGTCGTTAAAATTTTATCCTTTAGCACGAAAAATAGTTACTTGCCTGATATCCGTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCct < 2:1040641/140‑1 (MQ=255) ttCCATGCGTTTTACAAGGTTTTACTAACCGCATTGTCCTAAAAAGATGGTGAAACTTTTATCATTTAGCACGAAAAAGAGTTACTTGCCTCATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCct < 2:2649392/140‑1 (MQ=255) ccATTCGTTTTACAATCGTTTTCTCATCTCATTGTCCTAAAAATCTCGTGAAACTTTTATCCTTTACCCCGAAAAAGAGTTACTGGCGTTTTATCCCTTTTG‑TTTTCATAAACACGACTCGCCACCCGTCCGGATCctct < 2:1111561/140‑1 (MQ=255) aTTCTTTTGACTAGCTTTTTCCTATGGATTTTTCCTAAAAAGCTCTTAAAAGTTTTATACTTTACAATGAAAATTAGTTACTTGACTTTTATCCCTTTTT‑TTTTCATAAAAACGACTCGCCAACCGTCCGGTTCCTCTAt < 2:5231167/140‑1 (MQ=255) tttaACATGCGTTTTCTCATGGCTTTGTCCAACAACCCTGTTAAAATTTTCATCGTTGACCCCAAAAAATTGTT‑CTTGCCCGGTAAGCCTTTTGTTATAAAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 1:2053028/140‑1 (MQ=255) tttaACAAGCTTTTTCTAATCGCTTTGTCATAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTACTTGCCTGATATCCATTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 2:3383413/140‑1 (MQ=255) ttACATGTGTTTTCTCATCGATTTTTCCAAAAAAGCTCGTCAAAGTTTTATCCTTTCGCACCAAAAAGTTTTATTTGCCTGATATCCCTTTTG‑TATACATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 1:4280929/140‑1 (MQ=255) tACATGCTTTTTCTCTGGGCTTTTTCCAAAAAACGTGTTGAAATTTTTATCCTTTCCCACGAAAATTTTTTACTGGCTTTATATCAGTTTTG‑TATTCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGc < 1:4923726/140‑1 (MQ=255) tACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCTCCAACCGTCCGGATCCTCTATCGTCACGc > 2:4390464/1‑140 (MQ=255) tACAAGCGTTTTCACCTCGCATTGTCATAAAAAGCTCGGCAAACTTTTATCCTTTCCCACTAAAAAGTGTAACTTGCCGCATATCCCTTTTT‑TATCCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGc < 1:3977168/140‑1 (MQ=255) aCAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGcc > 2:5083786/1‑140 (MQ=255) gctttttCTCCACGCATTTTCAAAAAACGCTCGTCAATCTTTTATCCTTAACCACTAAAAAGAGTTAGTGGCCTTATATCCCTTTTG‑TTTTCAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:4168609/137‑1 (MQ=255) gctttttCTAATCGATTTGTCATAAAACGGTCGTGAAACTTTTATCCTTTCGCACTAAAAAGATTTACTTGCGTGTTATCCCTTTTT‑TATAAAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:2368560/137‑1 (MQ=255) gCGTTTTCTATTGGCATTGTCCTAAAAAGCTCGTGAAAATTTTATCTTTTAGCACCAAAAAGAGTTACTTGCCTGTTATCCCTTTTT‑TTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:899690/140‑1 (MQ=255) gCGTTTTATAATCTCTTTGTCCTAAAAAGCTCGTTAAACTTTTATCCTTTAGCACTAAAAATAGTTACTTGCCTTATATCCATTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:1542115/140‑1 (MQ=255) ggTTTTCTCATCGAATTGTCCTAAAAAGCTCGTGAAAGTTTTATCATTTAGACCGAAAAAGTTTTACTTGGCTTTTATCACTTTTT‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:4075598/139‑1 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAATAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACTACTCGCCAACCTTCCGGATCCTATATCGTCACGCCTCCATgg > 2:1003572/1‑140 (MQ=255) tttCTCAGCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTGAGCACCAAAAAGAGTTCCTTGCCTGATAGCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 2:158586/140‑1 (MQ=255) tttATCACCGCAGTGTCCTAAAAAGCTCGTCAAACTTTTATCCTTTCCCACCAAAACGAGTTACTTGCCTCATATCCCTTTTG‑TATACATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 1:2899818/140‑1 (MQ=255) tCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa > 2:4475031/1‑140 (MQ=255) tCGCATTGTCCAAAAACGCTCTTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATAGCCCTTTTG‑TATTCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa < 2:4796551/140‑1 (MQ=255) tCGCATGGGCCTAAAAACCTCGTCAAACTTTTAGCCTTTAGCACGAAAAAGAGTTAGTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa < 2:3459472/140‑1 (MQ=255) cGCTTTGTCATAAAAAGCTCGTGAAACTTTTAGCCTTTAGCACCAAAAAGAGTTTCTGGCCTGATATCCCTTTTG‑TATTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTAc < 1:1533254/140‑1 (MQ=255) cGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTAc > 1:3779531/1‑140 (MQ=255) aTTGTCCTAAAAAGCTCGTTAAATTTTTATCCTTTCGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACggg < 2:4884145/140‑1 (MQ=255) | TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTG‑TATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCT > NZ_CP034943/3996718‑3996994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |