Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349432,991,2270TG27.8% 268.4 / 49.5 187intergenic (+28/‑179)gbsR/bslAtranscriptional regulator GbsR/biofilm‑surface layer protein BslA
Reads supporting (aligned to +/- strand):  ref base T (55/80);  new base G (52/0);  total (107/80)
Fisher's exact test for biased strand distribution p-value = 2.34e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 198 total aligned reads displayed.

ATACGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGG  >  NZ_CP034943/2991091‑2991363
                                                                                                                                            |                                                                                                                                         
   cGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑Gtgtttttt                                                                                                                                     >  2:1374945/1‑139 (MQ=255)
   cGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑Gtgttttgg                                                                                                                                     >  2:2091982/1‑138 (MQ=255)
   cGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑Gtgttgtgg                                                                                                                                     >  1:2567600/1‑136 (MQ=255)
   cGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCCTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑Gtttttttt                                                                                                                                     >  2:460362/1‑139 (MQ=255)
     aGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGGTTTTGtt                                                                                                                                   >  1:2264837/1‑140 (MQ=255)
     aGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGGTTTTGtt                                                                                                                                   >  1:1567906/1‑140 (MQ=255)
      gCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGttg                                                                                                                                  >  2:641040/1‑139 (MQ=255)
           tGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCttttt                                                                                                                             >  2:1842680/1‑140 (MQ=255)
                aGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCTGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGCGTGTTTTTTTGTTAtttttttt                                                                                                                          >  1:1445533/1‑138 (MQ=255)
                aGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTGTTTTGTTGTGTTTTTTGt                                                                                                                        >  1:1171140/1‑140 (MQ=255)
                     tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGTAAACCGGGC‑‑GTTTTTGTGTTCTGTTTTATGTAATta                                                                                                                   >  1:2839952/1‑140 (MQ=255)
                     tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTTTGTAATta                                                                                                                   >  2:2395255/1‑140 (MQ=255)
                     tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTATTTAATta                                                                                                                   >  2:2622694/1‑140 (MQ=255)
                     tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTATTTAATta                                                                                                                   >  2:3444031/1‑140 (MQ=255)
                     tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTGTTTTTTTTTTTTTTTGttaata                                                                                                                   >  1:666087/1‑135 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTTTGTTATTACTAC‑aaa                                                                                                           >  1:2807815/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTGTGTAATTACTAC‑aaa                                                                                                           >  2:2423170/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTATTTTTTATGTAATTAATAC‑aaa                                                                                                           >  2:428038/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTATTTTTTATGTAAGTACTAC‑aaa                                                                                                           >  2:22361/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTGTTTTGTTTTTTTTTTTTTTATTAATAC‑aaa                                                                                                           >  1:1082739/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGTTGTTTTTTATTTAATTACTAa‑aaa                                                                                                           >  2:3672434/1‑140 (MQ=255)
                               tATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTATTTAATTACTAC‑AAAttt                                                                                                        >  2:89401/1‑140 (MQ=255)
                                aTGATTGGCTGAAAGGGGTGGCTGAATCTGTGCAGAGCGGGTAAATTTTTAAATTTATACCGATTCAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTg                                                                                                       <  2:1196866/140‑1 (MQ=255)
                                   aTTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTATTTAAATACTAC‑AAAATTTaaa                                                                                                    >  2:507495/1‑140 (MQ=255)
                                    ttGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTTTTTTATTACTAA‑AAAatttttaa                                                                                                   >  1:584100/1‑135 (MQ=255)
                                     tGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTTTTGTTTTTTTTGTAATTAAAAA‑AAAATTTaaaaa                                                                                                  >  1:213942/1‑140 (MQ=255)
                                       gCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTATTTAAATTATAA‑AAAATTTAAAAATa                                                                                                >  2:1334718/1‑140 (MQ=255)
                                       gCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGTTTTTTTTTTTTTTATTAATAC‑AAAATTTAAAAATa                                                                                                >  1:296764/1‑140 (MQ=255)
                                            aaCGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTGTTTGTTGTTTTTTATGTAATTAATAC‑ACAATTTAAAAATaatgga                                                                                           >  2:1437913/1‑135 (MQ=255)
                                                ggttGCTGAATCGGTGCAGAGCGGGTAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGaaaaa                                                                                       <  2:1468161/138‑1 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTAATAA‑AAATTTGAAAAAAAAGGGaaaaaa                                                                                      >  2:3520109/1‑139 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGTTTTTTTTTTTGTAATTAAGAA‑AAATTTTAAAAAAAAGGGgaaaaa                                                                                      >  1:1705449/1‑139 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTGTTTGTTGTTTTTTATGTAATTAATAC‑AAATTTTTAAAATAATGGacaaaa                                                                                      >  1:3475984/1‑139 (MQ=255)
                                                    gCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATc                                                                                   <  2:714908/140‑1 (MQ=255)
                                                          tCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTATTTAATTAATAC‑AAAATTTAAAAAAAATGGAAAAACATACCAatt                                                                             >  2:37498/1‑140 (MQ=255)
                                                                 agagCGGGTAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCa                                                                      <  1:3672434/140‑1 (MQ=255)
                                                                  gagCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTATGTAAATTCTAA‑AAATTTTAAAAAAAAGGGAAAAACATGACATTTAATTCCaa                                                                     >  2:764807/1‑140 (MQ=255)
                                                                   agCGGGGAAATTTTTAAATTTATACCGATTGAAACACAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTGTGTTATTGTTTCTTGAATTAATAC‑AAATTTGAAAAATAAGGGACAAACATACCCTTTAATTcccca                                                                    >  2:235778/1‑137 (MQ=255)
                                                                     cGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGTTGTTTTTTTTTTAATTAAAAC‑AAAATTTAAAAATAATGGAAAAAAATACCAATTAATTCCaaaaa                                                                  >  2:1521581/1‑139 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGCTTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGGTTTTTTTGTTTTTTTTGTAAATAGTAC‑AAAATTGAAAAAAACGGGAAAAAAATGCGATTTACTTACAAAATAtt                                                               >  2:2834523/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTTTGTTATTACTAC‑AAATTTGTAAAATACGGGGACAAAATCCCAGTTAATTCCAAAatagt                                                               >  2:2169225/1‑138 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTATGTAATTACTAC‑AAAATTTTAAAATACGGGGAAAAAATGCCATTTAATTGCAAAATAtt                                                               >  2:2553152/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTTTGTAAATTCTAC‑AAAATTTGAAAATAAGGGAAAAAAATCCCATTTAATTGCAAAATAtt                                                               >  2:201500/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTGTTGTTGTTTTTTATGTAATTACTAC‑AAAATTGAAAAATACGGGAAAAACATACCCTTTACTTACAAAATAtt                                                               >  2:3758514/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGTTGGTGTTTATTTAATTAATAC‑AAAATTGAAAAATAAGGGAAAAACATACCAGTTAATTCCAAAATAtt                                                               >  2:297170/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGGTTTTGTTGTTTTTTATGTAATTAATAC‑AAATTTGAAAAAAAAGGGAAAAACATCCCCTGTAATTCCCAAATAtt                                                               >  2:3565536/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GGTGTTTTTTTCTTTTTTTTTTAATTAATAC‑TAATTTGTAAAATACGGGAAAAAAATACCATTTACTTCCAAAATAtt                                                               >  2:1940272/1‑140 (MQ=255)
                                                                             tttttAAATTTCTACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGTTCTTTTTTTTGTAAATAGTCC‑AAAATGGTAAAAAACGGGCAAAACCTCCGAGTGAGTTGCAAAATATTTGATg                                                          >  2:1101174/1‑140 (MQ=255)
                                                                              ttttAAATTTATCCCGATTCAAACAAAGAAAAACAAAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAACAACATCCCATTTACTTCCAAAATATTTGATgg                                                         <  1:3155466/140‑1 (MQ=255)
                                                                              ttttAAATTTATACCTATTGAAACAAAGTAAAACAAAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATgg                                                         <  1:641040/140‑1 (MQ=255)
                                                                              ttttAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATgg                                                         <  2:2710111/140‑1 (MQ=255)
                                                                              ttttAAATTTAAACCGATTCAAACAAACTAAAACAAAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATgg                                                         <  1:3565536/140‑1 (MQ=255)
                                                                               tttAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTTTTGTTTTTTATTTTATTAAAACAAAATTTAAAAAAAAGGGGAAAAAAAAACCA‑TTAAGTCCAAAAAATTTgttttt                                                        >  1:1936309/1‑135 (MQ=255)
                                                                                       tataCCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTATGTAATTACTAA‑AAATTTGAAAAATACGGGAAAAAAATACCAATTTCTTCCAAAATATTTGATGGTATtttttt                                                >  2:2125713/1‑138 (MQ=255)
                                                                                        ataCCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATg                                               <  1:1842680/140‑1 (MQ=255)
                                                                                        ataCCGATTCAAACAAAGTAAAACAAAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATg                                               <  1:2015919/140‑1 (MQ=255)
                                                                                        ataCAGATTGAAACAACGAAAAACAAAA‑A‑CGCCTGGGAAACCGGTC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACAAC‑AAATTTGAAAAATACGGGAAAAACAGCCCATTTACTTCCAAAATATTTGATGGTAATTTTATg                                               <  2:839077/140‑1 (MQ=255)
                                                                                             taTTTAAACAAATAAAAACAAAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                          <  1:2395255/139‑1 (MQ=255)
                                                                                             gATTCAAAAAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                          <  1:2622694/140‑1 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTTTTTTTTAATTAAATACAAC‑AAATTTGAAAAATAACGGAAAAACCTACCCATTACTAACCAAATATTTGATGTTAATTTTATGTAGGtg                                         >  2:2297987/1‑139 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTATGTAATTACTAC‑AAATTTTAAAAATACGGGAAAAAAATACCATTTTATTACAAAATATTTTATGGTAATTTTATGTTGGTa                                         >  2:872860/1‑140 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGCC‑‑GTTTTTTTGTTATTTTTTAAGTAAATACAAC‑AAAAATGAAAAATACAGGAAAAACATCACAGGTACTGACCAAATAGTTTATGGTAATTTTATGTAGGtt                                         >  2:1710917/1‑139 (MQ=255)
                                                                                                  aaaCAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt                                     <  2:1776709/140‑1 (MQ=255)
                                                                                                  aaaCAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt                                     <  2:2181988/140‑1 (MQ=255)
                                                                                                  aaaCAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt                                     <  1:1114463/140‑1 (MQ=255)
                                                                                                        aGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTGTTTTTTATTTAAATACTAA‑AAAATTTAAAAATACGGGAAAAACATACCATTTACTTACAAAAAATTTTTTTGTAAATTTATTTAGGTAAAATTTTTAt                               >  2:2909042/1‑140 (MQ=255)
                                                                                                            acaCAAAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:9498/138‑1 (MQ=255)
                                                                                                            aaacaaac‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:1882058/140‑1 (MQ=255)
                                                                                                            aaaaaaAC‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:2422797/140‑1 (MQ=255)
                                                                                                            aaaCTAAA‑A‑CGCCTGTGATACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTTATTACTAC‑AAATTTGAAAAATACGGGAAAAAGATCCCATTTACTTCCAATTTATTTGATGGTAATTTTATGTAGGTATAATTTGTATTTgg                           <  2:984331/140‑1 (MQ=255)
                                                                                                            aaaCAACA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:455914/140‑1 (MQ=255)
                                                                                                            aaaCAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  2:2057425/140‑1 (MQ=255)
                                                                                                            aaaCAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:1666522/140‑1 (MQ=255)
                                                                                                            aaaCAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GATTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  2:2934005/140‑1 (MQ=255)
                                                                                                            aaaCAAAA‑A‑CGCCTGGGAAACCGGGA‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACTGGAAAAACATACCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  2:3029425/140‑1 (MQ=255)
                                                                                                             aacaaac‑a‑CGCCTGGGAAACCGGGA‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGc                          <  1:2079230/140‑1 (MQ=255)
                                                                                                             aaCAAAACA‑CGCCTGGGAAACCGGGC‑‑GTTATTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:159144/140‑1 (MQ=255)
                                                                                                             aaCAAAA‑ACCGCCTGGGACACCGGGC‑‑GTTTTATTGTTCTTTTTTATGTAAATACTAC‑AAATTTGAAAAATACGGGAAAACCATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:2866537/140‑1 (MQ=255)
                                                                                                             aaCAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTTTTGTTTTTTTTTTAAATACTAC‑AAATTTTTAAAAAAAAGGAAAAAAAAACCCTTTAATTGCAAAATATTTTTTGGTAATTTTATGTAGGTAAAATTTGTAttttgg                          >  2:387278/1‑137 (MQ=255)
                                                                                                               cAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCg                        <  1:812805/140‑1 (MQ=255)
                                                                                                               aaaac‑a‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCg                        <  1:507495/139‑1 (MQ=255)
                                                                                                                 aaa‑a‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTATTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGtt                      <  2:1681856/140‑1 (MQ=255)
                                                                                                                  aa‑a‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTTTTTTTTTTTTAATTAATAC‑AAATTTTAAAAATAAGGGAAAAAAATACCATTTACTTGAAAAAAAATTGATGGTTATTTTATGTTGGTAAAATTTTTATTTGGGCggtg                     >  2:2926412/1‑137 (MQ=255)
                                                                                                                  aa‑a‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTTTTGTTTTTTATGTAATTAATAC‑AAATTTGAAAAATACGGGACAAAAATACCAATTAATTACAAAATATTTTATTGTAATTTTATGTAGGTAAAATTTTTATTTgggccgtc                     >  2:3384659/1‑134 (MQ=255)
                                                                                                                  aa‑a‑CGCCTGGGAAACCGGGC‑‑GTGTTTTTGTTGTTTTTTTTGTTATTAATAC‑AAAATTTTAAAAAAAGGGCAAAACATCCCATTTTAATACAAAATATTTGGTGGTTATTTTATTTAGGTAAAATTTGTATTTGTGCGttg                     >  2:1038113/1‑139 (MQ=255)
                                                                                                                        gCCTGGGAATCCGGGC‑‑TTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  1:2211427/140‑1 (MQ=255)
                                                                                                                        gCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  1:37498/140‑1 (MQ=255)
                                                                                                                        gCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  2:666087/140‑1 (MQ=255)
                                                                                                                        gCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  1:1732861/140‑1 (MQ=255)
                                                                                                                        gCCTGGGAAACCGGGA‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  1:2512050/140‑1 (MQ=255)
                                                                                                                        cccTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  1:2381951/139‑1 (MQ=255)
                                                                                                                         ccTTGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAgagg                <  2:250118/140‑1 (MQ=255)
                                                                                                                             ggAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGt            <  1:1437913/140‑1 (MQ=255)
                                                                                                                                  ccGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGaaaa       <  1:3230537/140‑1 (MQ=255)
                                                                                                                                  ccGGGC‑‑GTGTTTTTGTTGTTTTTTATTTAAATAATAC‑AAATTTGAAAAATACGGGAAAAAAATCCCATTTTCTTCCAAAATATTTTTTGGTAATTTTATTTAGGTAAAATTTTTATTTTGGCGTTAAGAGGAGGTGtaaa       >  2:2754198/1‑140 (MQ=255)
                                                                                                                                   cGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTAATAA‑AAATTTGAAAAATAAGGGAAAAAAAACACAATTAATTACAAAAAAATTGATTGTAATTTTATGTAGGTAAAATTTGTATTTTGGCGTTCAGAGGAGGTGaaaaa      >  2:3819058/1‑139 (MQ=255)
                                                                                                                                       c‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg  <  2:707404/140‑1 (MQ=255)
                                                                                                                                       c‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg  <  2:3181073/140‑1 (MQ=255)
                                                                                                                                       c‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg  <  2:2167924/140‑1 (MQ=255)
                                                                                                                                       c‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg  <  1:1374945/140‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                         
ATACGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAA‑A‑CGCCTGGGAAACCGGGC‑‑GTTTTTTTGTTCTTTTTTATGTAATTACTAC‑AAATTTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGG  >  NZ_CP034943/2991091‑2991363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑