Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0640CG26.6% 230.8 / 24.8 129W569C (TGG→TGC) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (24/59);  new base G (30/0);  total (68/61)
Fisher's exact test for biased strand distribution p-value = 6.58e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 131 total aligned reads displayed.

TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCC  >  NZ_CP034943/633925‑634202
                                                                                                                                           |                                                                                                                                           
tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc                                                                                                                                             >  2:167944/1‑140 (MQ=255)
       tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                          <  1:2117066/136‑1 (MQ=255)
       tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTGTTTTTGCATTCtt                                                                                                                                      >  1:2758143/1‑140 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTAGATTCtttttat                                                                                                                                 >  1:538686/1‑138 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTGTGTGTTTTGATTCtttttagt                                                                                                                                >  1:2521414/1‑137 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTACATTAATTttgtt                                                                                                                                >  2:1273477/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGGTTGTTTTTGCATTATTTttgtt                                                                                                                                >  2:824610/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTAGTTATTTTTACATTCtttttaat                                                                                                                                >  2:358221/1‑137 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCATTCTTTttgtt                                                                                                                                >  2:824468/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTCTTTGTTTTTGGATTTTTTttgtt                                                                                                                                >  2:2667366/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGTTTGTTTTTACAATAtttttttt                                                                                                                                >  1:1012635/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTGGTTTGTTTTTGCATTCTTTttctt                                                                                                                                >  1:700034/1‑140 (MQ=255)
                   gTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCATTCTTTTTATTGTTCat                                                                                                                          >  2:1611875/1‑140 (MQ=255)
                     cTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACTGAGTCGTTGGCGTTGTTTATTTTTCCATTATTTTTCTTATTAatat                                                                                                                        >  2:672484/1‑140 (MQ=255)
                       tGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTCCCATGTTTTTGTTGTTGATTTGa                                                                                                                      >  1:2200609/1‑140 (MQ=255)
                            gATTTCCGGATCACATAGCAAGTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCGTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                                 <  2:2276837/140‑1 (MQ=255)
                             aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTACATTATTTTTATTGTTCATATGAAAGttt                                                                                                                >  1:163410/1‑140 (MQ=255)
                                 ccGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAg                                                                                                            <  1:2811606/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCACTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                           <  1:1291866/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                           <  1:760836/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACGAATGTTTACTACAATGGTTTGAACAGTGGCTTCAATTTCATCACTCCGACGGAGTCGTTGGCGTTCTTTCTTTGTCCATTCTATTTATTCTTCATATGAACGTTTTGAGt                                                                                                           <  1:593143/140‑1 (MQ=255)
                                  cGGAACACATAGCAATGCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGCGACGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                           <  2:2004060/140‑1 (MQ=255)
                                       cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGGGTTCTTGTTCCATTCGGTTTCTTGGTCATATGCACGTTTTGATTCAggg                                                                                                      >  2:1885371/1‑139 (MQ=255)
                                                 ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTGTTTTTGCATTGTTTTTGTTGTTGAAATGAACGTTTTTTTTGAGGC‑TTAACCGaaa                                                                                           >  1:1178839/1‑139 (MQ=255)
                                                 ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTCTTTTTTGATTATTTTTATTGTTCATATGTACGTTTTTAGGAGGGC‑TTTAACGaac                                                                                           >  1:2265799/1‑139 (MQ=255)
                                                 ttCATCGTTATGACTAATGTTTTCTTCAATGGTGTGAACCGTGGCTTCAATTTCTTCAATCCGACGGTGTCGTGGGGGGGGTTTTTTTTTGCCATGGTTTGGGTGTTCATATGGACCGTTTGAGTCCGGCGTTAAccaac                                                                                            >  1:802739/1‑137 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGTTTTTTTTTGGATTGTTTTTGTTGTTGATATTAAAGTTTTTTGTGAGGC‑TTTAACGAACCa                                                                                         >  1:2459686/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTATTCTTCATATGAACGGTTTGATTCAGGC‑GTAACCGAAGCa                                                                                         >  2:2269540/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCGTTTTCCAGTCTTTTTATTCTTCATATGAAAGTTTTTAGTCAGGC‑TTAACCGAAGCa                                                                                         >  2:1386552/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGGATTCTTTTTGTTATTCATATGAACGTTTTGAGTCAGGC‑TTTAACGAAGcg                                                                                         >  1:1196614/1‑139 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTGTTTTTATTGTTAATATGTAAGTTTTTAGTCAGGC‑TTAAACGAAACa                                                                                         >  1:2636389/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGGTTGTGTTTGCAGTGTTTTTGTTGTTGATATGGACGTTTTTTGTGAGGCGTTAACCaaaca                                                                                          >  1:1716768/1‑138 (MQ=255)
                                                    aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTGTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAATCAg                                                                                        >  2:1986085/1‑140 (MQ=255)
                                                      cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTCATTCTTTTTGCATTATTTTTATTCTTGATATGAAAGATTTGTGTAATGA‑TTAAACGAAgaacgg                                                                                      >  2:1628479/1‑135 (MQ=255)
                                                           tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCAATTATTTTTGTGCTTGATAAGAAACTTTTTGGGAAGTC‑TTAACAGAAGCAGG‑Gttttt                                                                                >  2:1148464/1‑140 (MQ=255)
                                                                 aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTGTCTTTTTCCATTCGTTTTGGTCTTAGTATGAAAGTGTTGATTGAGGC‑TTAAACGAAACAGGGGTTTTTTGGGa                                                                           >  2:2023230/1‑140 (MQ=255)
                                                                 aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGa                                                                           <  2:317378/140‑1 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTATTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGAt                                                                          >  2:2077870/1‑140 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTATTTTTGTTCTTGATATTAAAGTTTTTATTGAGGG‑TTAACCGTAAAAGGCGGTTTTTAgggt                                                                          >  1:2034358/1‑138 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGTTTGTTTTTTCATTGTTTTTGTTGTTCATATGAAAGTTTTGTGTCAGGC‑TTAACCGAAACAGGCGttttttggtat                                                                          >  1:708888/1‑135 (MQ=255)
                                                                       tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCCTTATTTTTGTTGTTGATATGTTAGTTTTGTGTCAGGC‑TTAACCGAAGCAGGCGGTTTTTCGGGTTGctc                                                                     >  1:688242/1‑140 (MQ=255)
                                                                       tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCATTCTTTTTCCCTTCTTTTTCTTCGTCATATGAACGTTTTGATTCAGGC‑TTAAACGAAGCAGGCGTTGTTTGGGATTCctc                                                                     >  2:681760/1‑140 (MQ=255)
                                                                         ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTGCATTCTTTTTGTTCTTGATATGAACGTTTTGTGTAAGGC‑TTAACCGAAGCACGCGTTTTTTAGGATTCctcgt                                                                   >  2:2164738/1‑138 (MQ=255)
                                                                         ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTCTTTTTGTTGTTCATATGAACGTTTTTATTGAGGC‑TTAACCGAAGCACGCGTTTTTTAGGATTGCTAtt                                                                   >  2:1473327/1‑140 (MQ=255)
                                                                         ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTATTTTTCCATTATATTTGTTATTCATATGAAAGTTTTGTGTCAGGG‑TTAAACCAAGCACGCGTTTTTTAGGATTGATCtt                                                                   >  2:2164514/1‑140 (MQ=255)
                                                                          tcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTg                                                                  <  1:962478/140‑1 (MQ=255)
                                                                           cAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGc                                                                 <  1:2347089/140‑1 (MQ=255)
                                                                            aaTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCt                                                                <  2:1878790/140‑1 (MQ=255)
                                                                                        aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                                    <  2:2587358/140‑1 (MQ=255)
                                                                                         gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTACATTGTTTTTATTCTTCATGTTAAAGTTTTTAGTCAGTC‑TTAACCGAAGCATGGGTTTTTTTCGAGTCCTATTTCTTATTAATTTtatc                                                   >  2:1672563/1‑140 (MQ=255)
                                                                                         gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                                   <  2:806621/140‑1 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTTTTTGGATTGTTTTTGTTGTTAATATTAACGTTTTTTGTGAGGC‑TTTAACGTAGCAGGGGGTTTTTTGGTTTGCTGTTTGTGTTTAAttttgtgc                                                  >  2:352255/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCCTTGTTTTTGTTGTTGATATTTACGTTTTTATTCAGGC‑TTAACCGAAGCAGGCGTTTTTTGGGCTTCCTCTTGGTGGTTGAttttgtac                                                  >  2:210195/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTCTTTTTGCATTCTTTTTGTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAAACGAAGCAGGCGTTTTTTGGGATTGCTATTGCTGTTTAATTTtgtca                                                  >  2:2618026/1‑139 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGTTTGTTTTTCCCATGTTTTTGTTCTTCATATGAACGTTTTTAGTGAGGG‑TTAACCGAAGCCGGCGTTTTTTCGGTTTGGTCTTGGTGATTGTttttatac                                                  >  2:2176274/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACAGTGTTTTTGTTCTTCATATGAAAGTTTTGAGTCAGGG‑TTAAACGAAGCTGGGGTTTTTTCGGATTGCTGTTTCTGATTCATTTTGTcc                                                  >  2:2229653/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTCCAGTCTTTTTCTTCTTCATATGAACCGTTTGAGTCAGGC‑TTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTGGTGATTAAttttatac                                                  >  2:368096/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTTCATACTTTTTCTTGTTCATATGAACGTTTTTAGTCATGC‑TTAAACGAAGCAGGCGTTTTTTCGGATTCATGGTGGTGATTAATTTTATcc                                                  >  2:1974879/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTGCATTCATTTTGTTATTCATATTTACGGTTTGAGTCAGGC‑TTAAACCCAGCCGGCGTTTTTTTGGATTACTCGTTCTCATTCAttttatga                                                  >  2:443517/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGG‑TTAACCGAACAAGGCGTTTTTTGGGATTACTCTTTGAGATTAATTTTATcc                                                  >  2:1046008/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTGTTTTTCCATTGTTTTTGTTATTCATATTAACGTTTTTAGTCAGGC‑TTAAACGAAGCAGGCGTTTTTTAGGATTACTCTTTGTGATTAATTTtgtca                                                  >  2:1764245/1‑139 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCCTTATTTTTGTTGTTGATATTAAAGTTTTTTGTGAGGC‑GTTAACGAAGCAGGCGTTTTTTGGGAGTGCTCTTGGGGTTTGATTTTATcc                                                  >  1:2126049/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTACCTTCTTTTTAGTCTTCAAAAGGACCTTTTGAGGAACGC‑ATAACCGCACCAGGCGTTTTTTCCGATTCCTCGTGCTGTTTGATTTTCTcc                                                  >  2:643413/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTCTTTTTGCCATCTTTTTCTTGTTCATATGAACGTTTTTAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTcc                                                  >  2:1310781/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGGTCTTTCTTTTTCCATTCTTTTTCTTCTTGATATGAACGTTTTTATTCAGGC‑GTTACCGAAGCAGGCGTTTTTTAGGATTCCTCTTGGTTATTCAttttatgc                                                  >  2:1727150/1‑136 (MQ=255)
                                                                                                cAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCa                                            <  2:2758143/140‑1 (MQ=255)
                                                                                                  aTTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTGTTTTTCTTCTTGAAATGAACGTTTTTTGTCAGGC‑TTTAACGAAGCCGGCGTTTTTTGTGTTTGCGCTTTGTGTTTGTTTTTGTCCAATTAAAg                                          >  2:1259476/1‑140 (MQ=255)
                                                                                                  aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                          <  2:538686/140‑1 (MQ=255)
                                                                                                     tcttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                                       <  1:167944/140‑1 (MQ=255)
                                                                                                     tccacAACCCGACGCCGTCGGTGGCGGACTGTCTTTTGCCCTGCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                                       <  1:2392500/136‑1 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCATTCTTTTTATTCTTCATATTAACGTTTTTGGTCAGGC‑TTAAACGAAGCAGGCGTTGTTTGGGATTCGTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                     >  2:1581565/1‑140 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                     <  1:1277970/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                           <  2:2480549/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                           <  1:1361852/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCGCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                           <  1:1727667/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTGGGCGTTCTTTCTTGTTCCATTCTTTTTCGTCTTCATATGCACGTTTTGACTCAGGC‑TTAACCGAAGCAGGCGTTTTTGCGGATGCCTCTTGCTGATTCATTTTCTACAATTCAAGCTGCTCTGtttttgt                           <  1:1885371/140‑3 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                         <  1:2092006/140‑1 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                         <  2:1159740/140‑1 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTACATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGAGTTTTTTAGTATTCCTCTTGCTGATTAATTTTCTCCAATTCAAGATGATCTtttttttttt                         <  1:1273477/140‑3 (MQ=255)
                                                                                                                    aGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtctc                        <  2:520004/140‑1 (MQ=255)
                                                                                                                          tGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtata                  <  2:2521414/140‑1 (MQ=255)
                                                                                                                           ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa                 <  1:1222865/140‑1 (MQ=255)
                                                                                                                               ttctttctTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATaataat             <  1:2241661/140‑1 (MQ=255)
                                                                                                                               ttctttctTTGTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATaataat             <  1:1817394/140‑1 (MQ=255)
                                                                                                                                tctttcttTTTCCATTCTTTTTCTTCTTCATATTAAAGTTTTTAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTGGGATTACTAATTCTGATTAATTTTATCCAAATAAATCTGCTCAGTTTTTTTATACCTATAATAATc            >  1:610881/1‑140 (MQ=255)
                                                                                                                                gctttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATc            >  2:2074620/2‑140 (MQ=255)
                                                                                                                                   ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa         <  2:2512464/140‑1 (MQ=255)
                                                                                                                                   ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa         <  1:2177703/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  2:2636389/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  2:2126049/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  2:1514276/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:1880914/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:2077870/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCAGTCTTTTTCTTCTTCCTATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  2:338274/140‑1 (MQ=255)
                                                                                                                                     cattttCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATGCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTact       <  1:358221/138‑3 (MQ=255)
                                                                                                                                          tCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc  >  1:2647412/1‑140 (MQ=255)
                                                                                                                                          tCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc  <  2:1295773/140‑1 (MQ=255)
                                                                                                                                          tCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc  <  1:1386552/140‑1 (MQ=255)
                                                                                                                                          tCCATTCTTGTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCGCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCcccc  <  1:188755/140‑1 (MQ=255)
                                                                                                                                          tCCAGTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc  <  1:2652395/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCC  >  NZ_CP034943/633925‑634202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑