| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,366,028 | A→C | 9.9% | T176P (ACG→CCG) | EO946_RS07135 → | PepSY domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,366,028 | 0 | A | C | 9.9% | 416.7 / 3.6 | 176 | T176P (ACG→CCG) | EO946_RS07135 | PepSY domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (65/84); new base C (3/23); total (68/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 180 total aligned reads displayed.
GAAGATGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTG > NZ_CP034943/1365893‑1366163 | taagaTGGATAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAcggg < 2:2550649/139‑1 (MQ=255)gaagaTGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAcggg > 1:488919/1‑140 (MQ=255)gaagaTGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGAAGTAGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAAAACCGATTACTAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAcggg > 1:3960301/1‑140 (MQ=255)caagaTGGAGAAACCTACCAAGTGAATATATACATTATTCCAAACTCACTCTTGTCTGCTGATCGAATCAGCGGTTAAGATCAACACAACACACCGATTAGGAAAAAACAAGCCAAAACCAGTGCTGATCGATAATcggg < 2:488324/139‑1 (MQ=255) gagaAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAcggg < 1:709095/133‑1 (MQ=255) gagaAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACa < 2:615059/140‑1 (MQ=255) gagaAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACa < 1:1696778/140‑1 (MQ=255) gagaAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACa < 2:1838548/140‑1 (MQ=255) tACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGa > 2:70525/1‑140 (MQ=255) cGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAACACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACg < 2:1313521/140‑1 (MQ=255) aGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAg > 1:3455903/1‑140 (MQ=255) tGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAACACCAGTGCTGAGCGAGAACCGGGCGGG‑ACAGCGGATGACGCAGag > 1:2961336/1‑139 (MQ=255) tGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGag > 1:793583/1‑139 (MQ=255) aaGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGAtct > 2:1168462/1‑140 (MQ=255) aaGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGAtct > 2:2316066/1‑140 (MQ=255) aaGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGAtat > 2:2141353/1‑138 (MQ=255) aCATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGaaaaa > 2:4003614/1‑140 (MQ=255) tGAATGCAAAAGCAGTCGTGTCTGCTGCTCGAATCAGCGGTGAAGATCAACAAAAAACACCGAGTACGAAAAAAGAAGCCAAATCCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGt > 1:262966/1‑140 (MQ=255) tGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGt > 2:1464905/1‑140 (MQ=255) tGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGt < 2:3107945/140‑1 (MQ=255) tGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGt > 2:3780872/1‑140 (MQ=255) tGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGt < 2:733095/140‑1 (MQ=255) agAATGCAAAAGCAGTCGTGTATGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGt < 2:2815155/139‑1 (MQ=255) gAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTg < 1:197900/140‑1 (MQ=255) gAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTg < 1:1439175/140‑1 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACATCGGATGACGCAGATCTCGAAAAAAGTGa > 1:1856420/1‑140 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGa > 2:3809155/1‑140 (MQ=255) gCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAggg < 2:1271178/140‑1 (MQ=255) gCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAggg < 2:1419232/140‑1 (MQ=255) gCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCActct < 1:2075274/140‑1 (MQ=255) gCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCActct < 1:3876897/140‑1 (MQ=255) cAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACtctc > 2:3869777/1‑140 (MQ=255) gTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCAt > 1:3165359/1‑140 (MQ=255) gTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCAt > 1:170123/1‑140 (MQ=255) cGTGTCTGCTGATCGAATCAGCGCTGAAGATCAACAAAAAACACCGATTACGAACAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCt < 2:1937359/140‑1 (MQ=255) gtgtCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCtt < 2:3881268/140‑1 (MQ=255) gtCTGCTTATCGAATAATCGTTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGTGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTg < 2:3960301/140‑1 (MQ=255) tCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGa > 1:3325271/1‑140 (MQ=255) tCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGa > 1:886622/1‑140 (MQ=255) tCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGa > 1:3348042/1‑140 (MQ=255) ctgctgATCGAATCAGCGGTGAAGATCAACAAACAACACCGAGTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGaa < 2:1921503/140‑1 (MQ=255) ctgctgATCGAATCAGCGGTGAAGATCAACAAAAACCACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGaa < 1:3682409/140‑1 (MQ=255) ctgctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGaa < 1:1510139/140‑1 (MQ=255) ctgctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGaa < 2:1250900/140‑1 (MQ=255) ctgctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGaa < 2:556003/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAACAACCCCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 1:2362168/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 2:3998955/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 2:1489572/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 2:2615938/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACAGATTACGAAAAAAGAACCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 1:2521698/140‑1 (MQ=255) tgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTgg > 2:137561/1‑140 (MQ=255) tgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCAGTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATGTTTGAGGTgg > 2:1523647/1‑140 (MQ=255) gATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGa < 2:886622/140‑1 (MQ=255) gATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGa < 2:3444995/140‑1 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 2:1082383/1‑140 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 1:1474917/1‑140 (MQ=255) cGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCCTTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGAGGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTGGGAAGTGGAGGt > 1:3490707/1‑140 (MQ=255) cGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCt > 1:1766543/1‑127 (MQ=255) cGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCt < 2:1766543/127‑1 (MQ=255) cGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCt > 1:3828151/1‑127 (MQ=255) cGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGt > 1:2664666/1‑140 (MQ=255) cGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGt > 1:524883/1‑140 (MQ=255) gAATCAGCGGTGAAGATCAACAAAAAACACCGCTTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGtt < 1:2631612/140‑1 (MQ=255) aTCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGa > 2:2645185/1‑140 (MQ=255) gAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga < 1:1195204/140‑1 (MQ=255) gAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga > 1:197451/1‑140 (MQ=255) gAAGATCAACAAAAAACACCGATTACGAAAAAACAAGCCAAAACCATTGCTGAGCGAGAAACCGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga < 2:29285/140‑1 (MQ=255) aaGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGa < 1:3545057/76‑1 (MQ=255) aaGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGGTGATCTTCCGgat > 1:2773854/1‑140 (MQ=255) aaGAGCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATATTCCGgat > 2:2993466/1‑140 (MQ=255) aGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGgatg < 1:2867771/140‑1 (MQ=255) aaCACCGTTTACCAAAAAACACGACAAAACCAGTGCGGAGCGATCCCGGGGGGGG‑ACCGGGGATGACGCAGTTCTCCAAAAATGTGAGGGCACTCTCATCTTTGATGTGTTTTTTGATGTTCCGGATTATAAACACGCGa < 2:524883/140‑1 (MQ=255) taacccAAAACCTTTGCTGAGCGACAACGGGGGGGG‑ACAGGGTATGACTCATATCTCTAAAAAAGTGTGGGCACTCTAATTTTTTATGTGTTTTTTGATCTTCCGTATTATAAAGACGCGACTGTGAAAATTAATGCCTa < 1:1230430/136‑1 (MQ=255) aaCCTTTGCTGCGCGATAACCGGGCGGG‑ACTGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCTTCTTTGATGTGTTTGTTGATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:2867455/140‑1 (MQ=255) aaCCATTGCTGAGCTATAACGGGGCGTG‑ACAGCGTATAACCAAGATCTCCAAAAAATTTAGGGCACTATCATCTTTGAAGTGTATGTTTATCTTCGGTATCATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:2708402/140‑1 (MQ=255) aaCCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGaa > 1:2437219/1‑140 (MQ=255) tttGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCTAAAAATGTGAGGGAAATATCATCTTTTAAGTGTATGTTGATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGt < 2:3014400/139‑1 (MQ=255) tttGCTGAGCGACAACGGGGGGGG‑ACAGCGGATGACGCAGATCTCTAAAAAATTGAGGGAACTCTCATGTTTGAAGTTGTTGTTTATCTTCGGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGt < 1:76859/139‑1 (MQ=255) tGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTg > 2:3829692/1‑140 (MQ=255) tGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACAACGGAAAGGTTg > 2:3748903/1‑140 (MQ=255) gCTGAGCCATAAACGGGGGGG‑ACAGCGTATGACGCAGATCTCGAAAAAATTGAGGGCACTCTCATCTTTTAAGTGGATGTTTATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGc < 2:907384/140‑1 (MQ=255) ctgctcGACAACCGGGCGGT‑ACCCCGGATGACCCATATCTCCAAAAAAGTGATGCCACTCTCATCTTTGACGTGTATGTTGATCTTCCGTATTATAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:2419996/135‑1 (MQ=255) ctctgCGAGACACGGGCGGG‑ACCGGGGTTGCCGCCTCTCTCGAAAAATGTGAGGCCACTATCATGTTTGATGTGTTTGTTGATCTTGCGTATGATACAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:3422089/136‑1 (MQ=255) cTGAGCGAGAAAGGGGCGGG‑ACAGCGTATGACGAATATCTCGAAAAAAGTGAGGGAACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:3348042/140‑1 (MQ=255) cTGAGCGACACACGGGCGGG‑ACAGCGTATGACCCAGATCTCGAAAAAAGTGCGGCCACTCTAATCTTTGAAGTGGTTGTTGATCTGCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:318209/140‑1 (MQ=255) aGCGAGAAACGGGCGGG‑ACAGCGTATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:748838/137‑1 (MQ=255) aGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc > 1:2287589/1‑140 (MQ=255) aGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc > 1:733676/1‑140 (MQ=255) gctataaaCGGGCGGT‑ACCGCGTAGCACGCATTTCTACAAAAAAGTTTGGGCACTTTATTTTTTTATGTGTTTTTTTATATTCGGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:685901/135‑1 (MQ=255) gctacaaaCGGGCGGC‑ACAGCGTATGACGCATATCGCTAAAAATGTGAGGGCACTATAATCTTTCATGTGTTTTTTTATCTTCCGTTTTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:1169870/135‑1 (MQ=255) gCGAGACAGGGGGGGG‑ACAGGGGATCACGCAGATCTCTAAAAATGTGAGGCCACTCTAATTTTTGATGTGGTTTTTTATCTTCCGTTTCATAACCCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:2424357/140‑1 (MQ=255) gCGACAACCGGGCGGG‑ACAGCGGTTGACGAACATCTCTAAAAAAGTGAGGCCACTCTAATCTTTGAAGTGGATGTTGATCTTCCGTATCATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:3548506/140‑1 (MQ=255) cctagaAACGGCGGCG‑ACAGCGCAGCACCCAGAACGCTAAAAAAGAGAGGCAACTCTCATTTTTCATGTCGATGTTTATGTCCCGTATCAAAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:573382/137‑1 (MQ=255) ccGATAAAGGGGCGGC‑ACCGCGGATGCCGCATATCCCGAAAAATTTGAGGGCAATCTCATCTTTGATGTTGTTGTTTATGTTCCGGTGGATAACCCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:978830/139‑1 (MQ=255) ccGACAACCGGGCGGA‑ACAGGGTATCACGAACAGCTCTAAAAAAGTCAGCCCCACCGAATCTTGCACGGGGAGGTCGAACTCCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:1308852/139‑1 (MQ=255) gcgacaaCGGGCGGGTAAAGGGGTTGACGAAGATCTAAAAAAAAGTGAGCCCACTATAATCTTTGAAGTGGTTTTTCATCTGCCGTATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:2993466/135‑1 (MQ=255) cGAGAAACGGGCGCC‑ACCGCGGCTGACCCATATCTCTAAAAACGTGAGCGCCCAAAAATCTTTGACGTGGATGTTGAAAAACCGGATCATAACGAAGCGACTGTGAAAATTAATCCCTACACCGGAAAGGTTGCAAACAt < 2:849983/140‑1 (MQ=255) cgaACCGGGGGGG‑ACCCCGGATGCGGCACAGCTCTAAAAAAGGGCGCGCACTCACATCTTTTAAGTGGATGTTGATGTCCCGGTTTATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 2:3567026/139‑1 (MQ=255) agaACCGGGGGCC‑ACAGCTGATGACCCAAAACTCCAAAAAAGTTAGGGCACTATAATCTTGGTAGTGGTTTTTTATATTCCGTATTATAAACCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 1:126450/140‑1 (MQ=255) agaAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg > 1:685901/1‑140 (MQ=255) | GAAGATGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTG > NZ_CP034943/1365893‑1366163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |