| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,539,589 | T→G | 7.5% | I122L (ATC→CTC) | EO946_RS18215 ← | T7SS effector LXG polymorphic toxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,539,589 | 0 | T | G | 7.5% | 566.2 / 4.1 | 223 | I122L (ATC→CTC) | EO946_RS18215 | T7SS effector LXG polymorphic toxin |
| Reads supporting (aligned to +/- strand): ref base T (91/106); new base G (23/3); total (114/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.73e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 234 total aligned reads displayed.
AGGGATTCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAAC > NZ_CP034943/3539450‑3539725 | aGGGATTCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAt > 2:3918902/1‑140 (MQ=255)aGGGATTCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAt < 2:3718049/140‑1 (MQ=255)aGGGATTCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAt < 2:2101884/140‑1 (MQ=255) gATTCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATttc > 2:223490/1‑140 (MQ=255) gATTCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATttc > 2:3402078/1‑140 (MQ=255) ttCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATttctt > 2:3892100/1‑140 (MQ=255) ttCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATttctt > 2:385757/1‑140 (MQ=255) tcatcaAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATttcttc > 1:3945783/1‑140 (MQ=255) catcaAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTtgttc‑t > 2:2552440/1‑140 (MQ=255) aGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTC‑TTTAtt > 1:648314/1‑139 (MQ=255) aGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTCTTG‑TTTATg > 1:2972109/1‑140 (MQ=255) gCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTG‑TTTAtta > 2:2816708/1‑138 (MQ=255) ataagagACAGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAg > 1:1866178/7‑140 (MQ=255) ataagagACAGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCGTC‑TTTATGAg > 1:1759291/7‑140 (MQ=255) aTCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGATCgg > 1:2630926/1‑140 (MQ=255) tCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTG‑GTTATTAGCGga > 2:1089114/1‑140 (MQ=255) aCTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGAc < 1:1489797/140‑1 (MQ=255) gtgctgTGAGTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TGTATGAGCGGAGACa < 1:47083/139‑1 (MQ=255) tgctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCGTG‑TTTATGAGCGGAGACaa > 2:1497068/1‑140 (MQ=255) tgctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTATTG‑TTTTTGAGCGGAGACaa > 2:3176854/1‑140 (MQ=255) tgctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTCTTC‑TTTTTGAGCGGCGAcca > 2:3628007/1‑138 (MQ=255) gctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTATTC‑TTTATGAGCGGAGACAAt > 2:1212710/1‑140 (MQ=255) ctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTG‑TTTATGGGCGGGGACacat > 1:2259286/1‑137 (MQ=255) ctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTG‑TTTATGATCGGAGACCAtt > 1:2558508/1‑140 (MQ=255) ctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGAc > 2:1490420/1‑136 (MQ=255) ctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACaaat > 2:3684283/1‑138 (MQ=255) ctgTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATGTGTTG‑TTTTTGAGCGGAGACCAtt > 1:3071044/1‑140 (MQ=255) gATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTg < 2:1545326/140‑1 (MQ=255) ttGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAg < 1:181187/140‑1 (MQ=255) gtgtCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTG‑TTTATGAGCGGAGACAAATTATGATGc > 1:339490/1‑140 (MQ=255) gtgtCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTATTG‑TTTATGAGCGGAGACAAATTCTGAGGc > 1:3169181/1‑140 (MQ=255) gtgtCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTGTTC‑TTTATGAGCGGAGTCAATTTCTGAGGc > 1:2798077/1‑140 (MQ=255) gtgtCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGGTGGTC‑TTTTTGTTCGGAGAAAATTTCTGAGGc > 1:2986065/1‑140 (MQ=255) tCACGTCTGATTTTTTGGGCATCGCCCATCTTATCTGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATAGAATCGATTTCTTC‑TTTATGAGCGGAGACAATCTCTGAGGCttt > 2:611367/1‑140 (MQ=255) tCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTG‑TTTATGAGCGGAGTCCATTTGTGATGCttt > 2:3328686/1‑140 (MQ=255) tCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCttt < 2:525180/140‑1 (MQ=255) tCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCttt < 2:2122114/140‑1 (MQ=255) tCACGTCTGATATATTCGGAATCTCCCATCTTATCGGCATAGTCGTGAAGCTTGTAACTGTCGAGATCAATAATATAGCTTATGCCTGACAAAATGGAGTCGATTTCTTCATGTAT‑AGAGGAGACAATGTGAGAGGCtgg > 2:1822596/1‑138 (MQ=255) cACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTCCATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCAGAGGCTTTc < 1:883374/140‑1 (MQ=255) cGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCaa < 2:2844853/140‑1 (MQ=255) tCTGATTTTTTGGGCATCTCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGt < 2:642887/140‑1 (MQ=255) tCTGATTTTTTGGGCATCGCCCATCTTATCTGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATAGAATCGATTTCTTC‑TTTATGAGCGGAGACAATCTCTGAGGCTTTCAGGt < 1:1130411/140‑1 (MQ=255) tCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTG‑TTTATGAGCCGAGACAAATTCTGAGGCTTTCAAGt > 1:967606/1‑140 (MQ=255) tCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGt < 1:3628007/140‑1 (MQ=255) tCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGt < 2:3035863/140‑1 (MQ=255) tCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGt < 1:128000/140‑1 (MQ=255) tCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGt < 2:536250/140‑1 (MQ=255) tCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTGCAAGt < 1:1295440/140‑1 (MQ=255) gATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGATCGGAGACAATTTCTGGGGCTTTGAAGtctc > 2:3765895/1‑140 (MQ=255) ttttttGGGCATCGCCCATCTTATCTGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATAGAATCGATTTCTTC‑TTTATGAGCGGAGACAATCTCTGAGGCTTTCAGGTCTCCa < 1:611367/140‑1 (MQ=255) ttttttGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCa < 2:2978427/140‑1 (MQ=255) ttttttGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCa < 1:2093956/140‑1 (MQ=255) ttttttGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCa < 1:23305/140‑1 (MQ=255) tGGGCAGCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGAACAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTggg < 2:164335/140‑1 (MQ=255) ttATCGGCATAGTCGTCAAGCGTGTACATGTCGAGAGCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTA‑TTTTTGAGCGGATACAATTTCTGAGGCTTTCAATACTCCATTGGGGCGCTCATGATccca > 2:2024137/1‑138 (MQ=255) aTCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTATTC‑TTTATGAGCGGAGAAAATTTCTGAGGCTTTCAAGTCTCCATTTGGCAGCGAATGATCCaaaa > 2:3737233/1‑140 (MQ=255) cATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAaagaa < 2:1693094/140‑1 (MQ=255) cATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAaagaa < 2:1759291/140‑1 (MQ=255) cATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAaagaa < 2:1866178/140‑1 (MQ=255) tAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTG‑TTTATTAGCGGAGACAAATTGTGAGGCTTTCAAGTCTCCCATTGGCACCGCATGATACAAAAAATAAGt > 1:3425152/1‑140 (MQ=255) tcgtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTc < 2:10658/140‑1 (MQ=255) tcgtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTc < 2:3945783/140‑1 (MQ=255) tcgtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGACACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTc < 2:551685/140‑1 (MQ=255) gaGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑at < 1:1554825/139‑1 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTG‑TTTATGAGCGGATACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATACAAAAAATAAGTTTACAC‑ATATGaa > 2:3445511/1‑140 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGaa < 1:4010926/140‑1 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTGTTG‑TTTATGAGCGGAGACAAATTCTGTGGCTTTCAAGTCTCCCTTTGGCAGCGCAAGATACAAAAAAGAAGTTTGCAC‑ataataa > 1:2136610/1‑136 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGGTGGTG‑GTTTTGAGCGGCGACAAATTCTGAGGCTTTGAAGTGTGCCATGGGCATCGCAATATACCCAAAACAACTTTGCAC‑AAATgta > 1:3595356/1‑138 (MQ=255) tggccATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCGTTCACGTCTCCATTGGGCAGCTCATGATCCAACAAAGAAGGTTCCAC‑ATCTGaa < 2:684386/136‑1 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTC‑TTTATGAGCGGCGACAAATTCTGAGGCTTTCAAGGCGCCATTGGGCAGCTCATGATCCAAAAAAGAAATTTACAC‑AAATGGATc > 2:3726275/1‑140 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTAAAGTCTCCATTTGGCAGCTCATGATCCAAAAAAGAAGTTTACAC‑ATATTAAta > 2:2167854/1‑139 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTC‑GTTTTGAGCGGAGACAATTTGTGTGGCTTTGAAGTCTGCAGTGTGGCGCTCATGATGCAAAAAAGTAGTTTACAC‑aaattgatc > 1:3576835/1‑135 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGAc < 1:337097/71‑1 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTGTCCATTGGGCAGCAAATGATCCAAAAAATAAGTTTGCAC‑ATATTAATc > 2:1978392/1‑140 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTA‑TTTATTAGCCGAGACAAATTGTGAGGATTTAAAATCTACATTGGGCAGCTCATGATACAAAAAAGAAGTTTCCAA‑ATATTAAta > 1:1010692/1‑139 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTA‑TTTATGAGCGGAGACAAGTTCTGAGGCTTTCAAGTCGCCATTGGGCAGCTCATGATCCAAAAAAGTAGTTTACAC‑CTATGaaac > 2:793090/1‑138 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTGTTG‑TTTTTTAGCGGAGACAAATTCTTAGGCTTTGAAGTCTCCCATTGGCAGCTCAATATCCAAAAAAAAAATTTACAC‑AAATGaaaa > 1:1033682/1‑138 (MQ=255) tACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGGTGTTC‑TTTATGAGCGGAGACAAATTCTGAGGCTTTCAATTCTCCATTGTGCAGCTCATGATCAAAAAAAGAATTTTCCAC‑ATATTaaaa > 2:1354016/1‑138 (MQ=255) aTGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCAtt < 2:3550141/140‑1 (MQ=255) aTGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCAtt < 2:1231148/140‑1 (MQ=255) aTGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCAtt < 2:1606247/140‑1 (MQ=255) aTGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTAGGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAACAGAAGTTTCCAC‑ATATGAATCAtt < 1:3756674/140‑1 (MQ=255) tGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTc < 1:1452472/140‑1 (MQ=255) tGTAGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTc < 1:2959602/140‑1 (MQ=255) gggcGAGAGCAATAAGATCGCTGATGCCTGACAAAATGGAGTAGATTTCTTC‑TTTACGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTc < 1:124613/137‑1 (MQ=255) agacaggaTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTc < 2:3155544/134‑1 (MQ=255) gagaTCGATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTG‑TTTATTATCGGAGACAATTTCTGTGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAATAAGTTTCCAC‑ATATTAATAATTAAGtt > 2:241928/1‑140 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTCAGTTCtt < 1:1964178/140‑1 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTCAGTTCtt < 1:3783008/140‑1 (MQ=255) tCAATAATATCGTTGATGCCTGACAAATTGGAGTAGATTTCTTC‑TTTATGAGCAGATACAATTTCTGAGGCTTTCAAGTCTACATTGGTCATCTCATGATGCAAAAAAGAAGTTTCCAC‑ATATGAATCATTCAGTTCTTg < 2:2317912/140‑1 (MQ=255) tCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTCAGTTCTTg < 1:1494308/140‑1 (MQ=255) cAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTG‑TTTATGAGCGGAGACAAATTCTGAGGCTTTGAAGTCTCCATTGGGCCGCTCATGATACAAAAAATAAGTTTACAC‑AAATTAATAATTCAGttgttgt > 1:3110918/1‑139 (MQ=255) tCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTGAAGTCTCCATTGGGCAGCTCATGATCCCAAAAAGAAGTTTACAC‑ATATTAATAATTCAGTTCTTGATATTTTAt > 2:1745768/1‑140 (MQ=255) gCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAAACATTCAGTTCTTGATCTTTAATGt < 2:883222/140‑1 (MQ=255) cTGATGCCTGACAAAATGGAGTCGATTTGTTC‑TTTATGAGCGGAGACAAATTCTGAGGCTTTGAACTCTACATTGGGCAGCTCATGATCCAAAAAAGAAGTTTACAC‑ATATGAATCATTAAGGTCTTGTTATTTAATTtc > 2:3829214/1‑140 (MQ=255) cTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTATGCGGCGTTAAAGTCTCCAGTGGGCAGCTCCTGATCCAAAAAAAAAGTTTCCAC‑AAATGAAACAATCAGTTCTTGATATTTAATGtc > 2:1282147/1‑140 (MQ=255) cTGATGCCTGACAAAATGGAGTCGAGTTGTTC‑TTTATGAGCGGCGACAAATTCTGAGGGTTTAAAGTCTCCCATTGGCAGCGCATTATCCAAAAAATAAATTTACAC‑AAAAGAAACATTCAATTGTTGCTCTTTAATGtg > 1:3861201/1‑139 (MQ=255) aTGCCTGACAAAATGGAGTCGATTTGTTC‑TTTATGAGCGGAGACAAATTCTGAGGCTTTCAAGTGTCCAATGGGCAGCGCATGATACAAAAAAGAAGTTTCCAC‑AAAATAATCATTCAGTTGTTGATATTTAATTTATcc > 2:1384983/1‑140 (MQ=255) aTGCCTGACAAAATGGAGTCGATTTATTC‑TTTATGAGCGTCGACCAATTGATATGCTTTCAACTCACCATTGGGCAGCTCATTTAACAAAAAATAACTTTCCACAATAT‑AATGAGTGTGTTGTTGTTCTTTAATTtctgc > 2:2940472/1‑138 (MQ=255) cTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGaa < 2:3231923/140‑1 (MQ=255) | AGGGATTCATCAAGCTTATCGACTGCTGTGATTGTGTCACGTCTGATTTTTTGGGCATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTC‑TTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCAC‑ATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAAC > NZ_CP034943/3539450‑3539725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |