| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 112,600 | T→A | 5.5% | intergenic (+278/‑26) | gltX → / → cysE | glutamate‑‑tRNA ligase/serine O‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 112,600 | 0 | T | A | 5.5% | 1511.0 / 9.3 | 580 | intergenic (+278/‑26) | gltX/cysE | glutamate‑‑tRNA ligase/serine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (168/357); new base A (33/9); total (204/376) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.61e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 580 total aligned reads displayed.
TCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGC > NZ_CP034943/112462‑112738 | aGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTGTTTGGTGGAGAGGAAAAGAAAt > 1:3912127/1‑140 (MQ=255) cggcCGCCGCCGTTCCAGGCTGAAGTTGGGCGAGCAGCCGTCTGCTTTTCCAACAGAGTGGACCCGCGCGGATGAAGCGTCTCTGTCATGTTTTCATGAAGAGGCGC‑TTTTTTTATGGGGGCAAGTGGTAATCAAATcga > 2:3327358/1‑140 (MQ=255) cggcCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATaga > 1:4252178/1‑140 (MQ=255) ggcCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATagag < 1:4526830/140‑1 (MQ=255) ggcCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATagag < 1:3670905/140‑1 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATTCAGAGGCGC‑TTTTTTTATTGGGTGTAGAGGAAATGAAATagaca > 2:4047712/1‑138 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAgaga > 1:77486/1‑140 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGGGAAGAGGAAATCACATAgaga > 2:3725536/1‑140 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TGTTTTTTTTTGGGGAAGAGGAAATACAATAgaga > 1:3350256/1‑140 (MQ=255) ccggcgccgTTACAGGCTGAAGGTGGGAGAGCAGAAGTCTGCTTTTCATTCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGTAGAGGAAAACAAATAGAGaa < 2:1136983/140‑1 (MQ=255) ccgccgcagTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGaa < 2:2177148/140‑1 (MQ=255) ccgTAACCGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCACACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGATTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTgggg < 1:5278049/140‑1 (MQ=255) gTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTgggggg < 1:1768742/140‑1 (MQ=255) cAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGc < 1:1246066/140‑1 (MQ=255) ggCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCAt < 2:5491461/140‑1 (MQ=255) tGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAGCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAAACAAATAGAGAAGTGGGGGGAAGCAtgtg > 2:2659850/1‑140 (MQ=255) aaGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCTTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGtttt > 2:2741460/1‑140 (MQ=255) cttcTTTTCAAACAGATTGGAACCGCGCTGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTTTAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:3504563/137‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:2824374/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:4619240/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:1519462/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:4934921/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:1666306/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 2:3023023/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTAGTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 2:5678413/140‑1 (MQ=255) tGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTTTTGGGTGTAGAGGAAATCAAATATAGAAGTGGGGGGAACCCGGTGTTTTTTTGTATTGTCAaataaa > 1:1888194/1‑139 (MQ=255) tGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑GTTTTTTATTTGGTGAAGAGGAAATCAAATAGAGAAGTTGGGGGACGCCGGTGTTTTTTTTAAATCTCAaagaag > 1:2722984/1‑140 (MQ=255) gattttCACACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGATGAAATCAAATAGAGAAGTGGGGGCAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:5078849/138‑1 (MQ=255) gattttAAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGAGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:5440837/138‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGGGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:4839007/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:5098966/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:4748050/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:3604508/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:4414831/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTGTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:2309211/140‑1 (MQ=255) cTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGAc < 1:4695676/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGACATCACATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:1077712/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:775797/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:1820456/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:5590698/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:564014/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:1721340/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:709436/140‑1 (MQ=255) aCAGTGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTTATTGGGTGAAGAGGAAAACACATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:1015190/140‑1 (MQ=255) gTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTTGGGGGATTGGAAATCAAATAAAGAAGTTGGGGGGAGCCAGGTTTTTTTATTATTCACAAATAACACAATtataaaaggt > 1:3775340/1‑134 (MQ=255) gTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑GTTTTTTTTTGGGTGTATAGGAAAAAAAAAATAGTAGTGGGGGGAAGCACTTGTTTTTTATTATTCTCAAAAAAAAAAATTATAAAgtgt > 1:2839895/1‑140 (MQ=255) tGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGtt < 1:2593778/140‑1 (MQ=255) cgAACCGCGCGGTTTAAGCGGCTCTGTCATGTTTTCATTCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAACTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTc < 2:3111575/139‑1 (MQ=255) cgcgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCa < 2:4352658/140‑1 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑GTTTTTTATTGGGTGAAGAGGAAAAAAAATATAGAAGTGGGGGGGAGCATGTGTTTTTTATAATGCTCAAAGAAGACATTGATAAAGTGTTGGATCAAg > 1:3048327/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGACGAGGAAAACAAATAGAGAACTGGGGGGAAGCATGTGTTTTTTAGAATGCACAAAGAACAAAATGATACAGTGGTAGAGAAAGAAACAGCAGCaagaa > 2:1486136/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATGAAATAGGGAAGTGGGGGGACGCCTGTGTTTTTTAGAATGGTCCAAGAAGACATTGATCCAGTGTTCGATCATGATCCAGCAGCgagaa > 2:5174439/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATATAGAAGTGGGGGGAAGCAGGTGTTTTTTAGAATGCTCAAAGAAGACATTGTTACAGTTTTAGATCAATATCCAGCAGCaagaa > 2:1390620/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTTGAATGCTCAAAGAATACATTGATACAGTTTTCGATCAAGATACAGCAGCaagaa > 2:5402458/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTATAATGCTCAAAGAAGACATTGATACAGTGTTCGATAAAGATCCAGCAGCaagaa > 2:1015972/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:5748101/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGATCAAACAAGACATTGATACAGTGTTAGATAAAGATACAGCCGcaacaa > 2:3500836/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGGGGAGAGGAAATAAAATAGAGAAGTGGGGGGAAGCCTGTGTTTTTTATAATTCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:347593/1‑140 (MQ=255) ctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaag < 1:1401771/140‑1 (MQ=255) ctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaag < 1:4479193/140‑1 (MQ=255) ctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGGGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaag < 1:395942/140‑1 (MQ=255) ttttCATGCAGAGGCGC‑TTTTTTTATTTGGTGAAGAGGAAATCAAATATAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATTCTCAAAGAAGACATTTATAAAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTAttttt > 2:459464/1‑139 (MQ=255) ttttCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:341610/93‑1 (MQ=255) ttttCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTTATACAGTGTTCGATAAAGATCCAGCAGCAAGAAGGTAttttt > 2:3975031/1‑139 (MQ=255) ttttCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTg > 2:2536506/1‑140 (MQ=255) tttCATGCAGAGGCGC‑TTTTTTTATTGGGTGTAGAGGAAATCAAATATAGGAGTGGGGGGCAGCCTGGGTTTTTTTTAATGCGCAAAGAAGACATTGTTACAGTGTTAGATAAAGATACAGCAGCAAGAAGTTAATTTGa > 1:4326670/1‑140 (MQ=255) ttCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGaa < 1:3578919/140‑1 (MQ=255) aTGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGCAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTTATACAGTGTTCGATCAAGATCCAGCAGCCAGAAGGTATTTTGAAGTg > 2:4959547/1‑140 (MQ=255) cAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAACGGGGGGGAAGCATGTGTTTTTTATAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGAtt > 2:1219709/1‑140 (MQ=255) gagGCGC‑TTTTTTTATTTGGTGTAGAGGAAATAAAATAGAGAAGTGGGGGGAAGCCTGGGTTTTTTTTAATGCTCAAATAAAACAATGATAAAGTGTTAGATGAAAATCCACCAGCAAGAAGTTATTTTTAAGTGAtttt > 1:4068440/1‑140 (MQ=255) gagGCGC‑TTTTTTTATTGGGTGAATAGGAAATAAAAAAGAGGAGTGGGGGGGAGCATGTGTTTTTTAGTATTCTAAAAAAAGACCTTGATACAGTGTTAGATCAAGATCCACCAGCAAGAAATTATTTTGTAGTGAtttt > 2:83963/1‑140 (MQ=255) tttttATTGGGTGGAGAGGGAATCAAATAGAGAAGTGGGGGGCATCAAGTGTTTTTTATAATGCTCAAATAACACAATGATACAATGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTTAGTTTAAGTTATTc > 2:622658/1‑140 (MQ=255) tttttATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTc < 2:2829031/140‑1 (MQ=255) ttattATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTc < 1:5043758/137‑1 (MQ=255) ttAGTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCgg < 2:1624583/140‑1 (MQ=255) cttGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTGAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGtt < 1:5777770/139‑1 (MQ=255) tGGGTGAAGAGGAAATCACATAGAGACGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 1:2018657/140‑1 (MQ=255) tGGGTGAAGAGGAAATCAACTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 1:640691/140‑1 (MQ=255) tGGGTGAAGAGGAAATCAAATAGAGCAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTGTAACTTATTCCGGTTTa < 2:2107839/140‑1 (MQ=255) tGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 2:3858967/140‑1 (MQ=255) tGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 1:856294/140‑1 (MQ=255) gggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTAc > 1:4752487/1‑140 (MQ=255) ggTGCAGAGGACATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:3315370/140‑1 (MQ=255) ggTGAAGCGCACATCAAAGAGCGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:326392/140‑1 (MQ=255) ggTGAAGAGGACATCAAATAGAGAAGGGGGGGGAAGCATGTGTTTTTTAGAAGGCTCACAGAAGACATTGATACAGGGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2198324/140‑1 (MQ=255) ggTGAAGAGGAACTCAACTAGAGCAGTGGGGGGAAGCATGTGTTTTTGAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:4159610/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGCAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:3857877/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2141159/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:1855086/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:1937506/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:3407329/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:2010064/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:447252/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:4099019/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2448585/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2977689/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGATTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:4176348/140‑1 (MQ=255) gagGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCtat < 2:876971/140‑1 (MQ=255) ggAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTatat < 2:5618142/140‑1 (MQ=255) aaaTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATgg > 1:3105487/1‑140 (MQ=255) | TCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGC > NZ_CP034943/112462‑112738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |