| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,446,955 | T→G | 5.8% | N211H (AAC→CAC) | degU ← | two‑component system response regulator DegU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,446,955 | 0 | T | G | 5.8% | 1122.8 / 12.8 | 428 | N211H (AAC→CAC) | degU | two‑component system response regulator DegU |
| Reads supporting (aligned to +/- strand): ref base T (191/194); new base G (40/2); total (232/196) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 448 total aligned reads displayed.
TATTGCTTTATAACTCTATTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTAAAAT > NZ_CP034943/3446816‑3447093 | aTTGCTTTATAACTCTATTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGttt > 1:4217439/1‑140 (MQ=255) ttATAACTCTATTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTAgatta > 1:4496886/1‑139 (MQ=255) ttATAACTCTATTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTAcaata > 1:2440942/1‑137 (MQ=255) aTTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCa < 2:1568273/140‑1 (MQ=255) aTTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCa < 2:1410435/140‑1 (MQ=255) aTTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCa < 2:2936166/140‑1 (MQ=255) aTTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCa < 1:1645466/140‑1 (MQ=255) aaGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAata < 1:5159301/140‑1 (MQ=255) aGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTTCATTAA‑TTTTTTGCAAAaaat > 1:2093094/1‑140 (MQ=255) aGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAatat < 2:5763068/140‑1 (MQ=255) aGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAatat < 2:433077/140‑1 (MQ=255) aGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTCAATTAA‑TTTTTTGCAAAatat > 2:4421401/1‑140 (MQ=255) aGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCGCGTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTTCAAAatat > 1:4608268/1‑140 (MQ=255) aGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGCAAAGTCTCTTATTATAATATCTCATTTCTACCAAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGAGCATTAA‑TTTTTTTAAAAaaat > 2:902615/1‑140 (MQ=255) gggAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCACGTCTCGTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATAtt > 1:1244273/1‑140 (MQ=255) gggAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTTCATTCA‑TTTTTTTGAAAATAtt > 1:3281564/1‑140 (MQ=255) gggAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATAtt < 2:2721935/140‑1 (MQ=255) gggAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATAtt > 1:3116191/1‑140 (MQ=255) gggAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATAtt > 1:2932078/1‑140 (MQ=255) gggAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTAA‑TTTTTTTCAAAAAAtt > 1:5530184/1‑140 (MQ=255) gAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTAAATTCA‑TTTTTTGCaaaaaaattc > 2:1689735/1‑134 (MQ=255) gAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTACATTAA‑TTTTTTGCAAAATATTGc > 2:5483702/1‑140 (MQ=255) aaCGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTTCAAAATAATgata > 1:3430526/1‑137 (MQ=255) aaCGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTc > 2:301174/1‑140 (MQ=255) aaCGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTc > 2:802253/1‑140 (MQ=255) aaCGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑GTTTTTGCAAAATATTGGTc > 2:613921/1‑140 (MQ=255) aaCGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTACATTCA‑TTTTTTGGAAAATATTGCtg > 1:4958902/1‑139 (MQ=255) aCGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTACATTCA‑TTTTTTGCAAAATAGTTCTca > 2:3650177/1‑140 (MQ=255) aCGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTGATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTca > 2:5615997/1‑140 (MQ=255) ggCCGCCGAAAAAAAGACCTCCCCAGTAAAAGGCAAGTCTATTATTAGACGATCTCAATTCTACCCAGCCATTTTTACTGGCGACCACAACGCCTTGCGTCCGGGCGTTTACATTCC‑TGTGTTGCAAAATATTGCTcaca < 2:877672/140‑1 (MQ=255) ggCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTcaca < 1:2028154/140‑1 (MQ=255) ggCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTcaca > 2:2641823/1‑140 (MQ=255) cAGCCTAACAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTCCCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATg < 2:3053348/140‑1 (MQ=255) ccTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGtt > 2:2036981/1‑140 (MQ=255) aaaaGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCAc < 1:1422167/140‑1 (MQ=255) aaaaGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCAc < 1:5732507/140‑1 (MQ=255) aaaaGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCAc < 2:414819/140‑1 (MQ=255) gACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCGTGCGTCCGGGCGTTTACATTCA‑ATTTTTTCAAAATAATTCTCAAAAGGTTATTAACGCtt > 2:1942113/1‑140 (MQ=255) tGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTtct < 2:2545059/140‑1 (MQ=255) gCCTAGTAAAAGGCAAGTCTCCTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGTAAAATATTGCTGACATGGTTTTTAACGGTTTtctc < 1:1837020/140‑1 (MQ=255) tAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCAAATGGTTTTTGACGGTTTTCTGACTgtt > 2:4961735/1‑138 (MQ=255) aaaaGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATa < 2:2187531/140‑1 (MQ=255) aaaaGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATa < 2:5138752/140‑1 (MQ=255) aGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAAc < 2:3195045/140‑1 (MQ=255) aGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAAc < 2:2440942/140‑1 (MQ=255) aGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAAc < 2:3895268/140‑1 (MQ=255) aGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATGTTTAATTGCGACCACAACGGCGTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACCTGGTTTTTCACGGTTTTCTCACTGATAAAc < 1:488207/140‑1 (MQ=255) ggCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTTAATTGA‑TTTTTTTGAAAATATTTCTCACAAGGTTTTTGACGGTTTTGTCACTGATaaaaa > 1:3596278/1‑138 (MQ=255) gCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACaa < 2:3717158/140‑1 (MQ=255) aGTCTCTTATTATACTCTCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTAGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGa < 1:960671/140‑1 (MQ=255) aGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGa < 1:829129/140‑1 (MQ=255) aGTCTCTTAGTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACCACGGCTTGCGTCCGGTCGCTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGa < 2:4390879/140‑1 (MQ=255) gTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGAt > 2:4041122/1‑140 (MQ=255) gTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACAATAA‑TTTTTTTCAAAATATTTGTGAGAGGGTTTTTCACCGTTTTGTCACTGATAAAAAAttct > 1:4684144/1‑137 (MQ=255) ctTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCAc < 2:4254836/140‑1 (MQ=255) ctTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGATTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCAc < 1:1148083/140‑1 (MQ=255) taCTATCTCATTTCTACCCAGCCATTTTTAATGCCGACCACAACGGCTTGCGTCCGGGCGTTTACATTCA‑ATGTTTGCAAAATATTGGTCCCATGCGTTTTCACGGTGTTCGCACGGAGTAACCACGAGTCACCAATAcc > 2:4504255/1‑140 (MQ=255) aTCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTACATTAA‑TTTTTTTCAAAATATTGGTCACATGGTTTTTAACGGTTTTATCACTGATAAAAAAATATTCAACCAAACCCCgg > 1:153322/1‑140 (MQ=255) aTCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTACAATAA‑ATTTTTTCAAAAAATTGCTCACAAGGTTTTTGAACGTTTTATCACAGATAAAAAAAGATTCAACAAAAAcgccg > 1:1716808/1‑138 (MQ=255) aTCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTATACATTCA‑TTTTTTTCAAAATATTTCTCACATGGTTTTTATCGCTTTTGTCACTGATAAACAATGATTCACCCATAACGCgg > 2:1772112/1‑140 (MQ=255) tctcATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACCTTCA‑TTTTTTGCAAAATATTGCTCACAATGTTTTTAACGGTTTTGTCACTGATAAAAACAGATTAACCAATACCTCGGt > 2:3363198/1‑140 (MQ=255) tctcATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTTCAAAATATTGCTCACAAGGTTTTTCACGGTTTTCTCACTTATAAAAAAAGATTAAACCAAACCGCGGt > 2:4686212/1‑140 (MQ=255) tctcATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTAA‑TTTTTTTCAAAAAATTGCTCACATGGTTTTTCACGGTTTTATAACTGATAAACAATGATTAACCAATAACGCGGt > 2:1173238/1‑140 (MQ=255) tctcATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTAAATTCA‑TTTTTTTCAAAAAAATGCTAACAAGGTTTTTAACCGTTTTATCACTTATAAACAAAAATTCACCAATACCCCGGt > 1:5368862/1‑140 (MQ=255) tctcATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTTCATTCA‑GTTTTTTCCAAATATTGCTCACATTGTTTTTGACCGTGTTGTAACAGAGAAACAAAGTTTCACCAAAAACGAGGt > 1:102798/1‑140 (MQ=255) ctcATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑ATTTTTGCAAAATATTTCACACATGGTTTTTCAAGCTTTTCTCACTTAAAAAAAATGATTGACCAAAAACGCgggt > 1:4316917/1‑138 (MQ=255) tcATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTTCAAAATATTGCTCACATGGTTTTTAACGGTTTTCTCAATGATAAAAAATGATTCACCAATACCGCGGTTg > 2:1081720/1‑140 (MQ=255) tttCTAGCCAGCCCTTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTGAATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTAACCGTTTTATCAATTAAAAAAAAAGAATAACCAATAACGCGGTTTCtt > 2:2344981/1‑140 (MQ=255) tttCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTGTAAATTCA‑TTTTTTTCAAAATATTTCTCACATGGTTTTTAACCGGTTTATCACTGATAAACAATGATTCACCCATAACCCCGTTGCtt > 1:3879465/1‑140 (MQ=255) tttCTACCCAGCCATTTTTAATGGCGACCACAAAGGCTTGCGTCCCGTCGTTTACATTCC‑TTTTTTGCCAAATAGTGAGAACATGGTTTATCACGGTTTTCACACTGATTAACAATGATTAAGCCATACCGCGCTTGGtt > 2:4739009/1‑140 (MQ=255) aCCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTcc < 1:4127896/140‑1 (MQ=255) aGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTTCATTGA‑TTTTTTTGAAAATATTTTTGAAATTGTTTTTAACGGTTTTATCACTGATAAAAAATTATTGACCAATAACGCGGTTTGTTTTTGGGTCt > 1:983684/1‑140 (MQ=255) aGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCa > 1:270627/1‑60 (MQ=255) ccATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTAA‑TTTTTTTCAAAATATTGCTCACATGGTTTTTAACCGTTTTGTAACTGATAAACAAAGATTAAACAAAAACGCGGTTGCTTTTTACGTCTGc > 2:1488749/1‑140 (MQ=255) tttttAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTTCAAAAAATTGCTCACATGGTTTTTCACGGTTTTATCACTGATAAAAAATGATTAAACAATACCGCGGTTGCTTTTTACGTCTTCAAg > 2:329917/1‑140 (MQ=255) ttttAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGc < 1:880421/140‑1 (MQ=255) ggCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTgca < 2:5242594/140‑1 (MQ=255) gCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCATTTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGGTGCTTTTTCCGTCTGCAAGCATCTgca < 2:1296298/140‑1 (MQ=255) gCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTgcag < 2:4850800/140‑1 (MQ=255) gCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTgcag < 1:3013577/140‑1 (MQ=255) gCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCAAATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTgcag < 2:182741/140‑1 (MQ=255) cGACCACAACGGCTTGCGTCCGGTCGTGTACATTCATTTTTTTGCAAAA‑ATTTCTCACAAGGTTTTTGACGGTTTTATCACTGTTAAAAAAAGATTAACCAATAACGCGGTTGGTTTTTACGGCGGGCAGCAACTgcagc > 1:1497809/1‑140 (MQ=255) gACCACCACGGCTGGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCAGATGGCTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAAGACCGCGGGTGCTTTTTCCGTCTGCAAGCATCTgcagca < 1:4421401/140‑1 (MQ=255) gACCACACCGGCTTGCGTCCGGTCGTTTACCTTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATACACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTgcagca < 1:2550503/140‑1 (MQ=255) gACCACAACGGCTTGCGTCCGGTCGTGTACATTCA‑TTTTTTTGAAAATATTTGTCACATTGTTTTTGACGGTTTTATCACTGATAAACAATGATTAAACAATAACGCGGGTGGTTTTTAAGTCTGCAATCAACTgcagga > 1:4849427/1‑138 (MQ=255) aCCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCAc > 2:2847722/1‑140 (MQ=255) cacaACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACTATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACtt < 1:558881/140‑1 (MQ=255) cTTGCGTCCGGTCGTTTACATTCA‑TTTTTTTGAAAAAATTGCTCACAAGGTTTTTAAAGGTTTTTTAACTGATAAACAATGATTCAACCAAAACGCGGTTGGTTTTTTCGTCTGCAAGCAACAGCAGCACGTaacaatac > 1:524692/1‑136 (MQ=255) gCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAAAATTGGTCACATGGTTTTTCACGGTTTTCTCACTGATAAAAAATGATTCACCAATACCGCGGTTTCTTTTTGCGTCTGCAATCATCTGCATCACTTCACATTCccgc > 2:5677647/1‑140 (MQ=255) gTCCGGTCGTTTTCATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTATCACTGATAAAAAATTATTCACCAATACCGCGGTTGGTTTTTCCGTCTGCAAGCAACTGCAGCACTTCACATTAccgccg > 2:4216941/1‑140 (MQ=255) cGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTACGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGt > 2:1335227/1‑140 (MQ=255) gTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTa < 1:1312164/140‑1 (MQ=255) cgattACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGAGAAACAATGATTCACCAAGACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTaaa < 1:3667553/137‑1 (MQ=255) cGTTTACATTCA‑TTTTTTGCAAAATATTGCTCTCATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTaaa < 2:849265/140‑1 (MQ=255) cGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTaaa < 1:667237/140‑1 (MQ=255) cGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTaaa < 2:5537152/140‑1 (MQ=255) cGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTaaa < 1:3169233/140‑1 (MQ=255) cGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGGTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTaaa < 1:2169898/140‑1 (MQ=255) cGTTTAAATTCA‑TTTTTTGCAAAATATTGCTCACATGTTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATATGCAGCACTTCACAGTCCCGCCGAGTTaaa < 1:4006616/140‑1 (MQ=255) tttACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTAAAat < 1:2364432/140‑1 (MQ=255) | TATTGCTTTATAACTCTATTGTAAGGGAAACGGCAGCCTAAAAAAAGACCTGCCCAGTAAAAGGCAAGTCTCTTATTATACTATCTCATTTCTACCCAGCCATTTTTAATGGCGACCACAACGGCTTGCGTCCGGTCGTTTACATTCA‑TTTTTTGCAAAATATTGCTCACATGGTTTTTCACGGTTTTCTCACTGATAAACAATGATTCACCAATACCGCGGTTGCTTTTTCCGTCTGCAAGCATCTGCAGCACTTCACATTCCCGCCGAGTTAAAAT > NZ_CP034943/3446816‑3447093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |