| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,796,125 | C→A | 8.1% | L8F (TTG→TTT) | EO946_RS19550 ← | ABC transporter permease subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,796,125 | 0 | C | A | 8.1% | 1218.6 / 20.5 | 464 | L8F (TTG→TTT) | EO946_RS19550 | ABC transporter permease subunit |
| Reads supporting (aligned to +/- strand): ref base C (165/244); new base A (3/52); total (168/296) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.71e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 468 total aligned reads displayed.
CGTCAGGAAGGTTTCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGTCTGTATA > NZ_CP034943/3795986‑3796262 | cGTCAGGAAGGTTTCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCCTTCTTTCTGc > 2:317211/1‑140 (MQ=255)cGTCAGGAAGGTTTCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGc > 2:1214804/1‑140 (MQ=255) tCAGGAAGGTTTCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCaa < 2:37463/140‑1 (MQ=255) aaGGTTTCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCg < 2:265733/140‑1 (MQ=255) tttCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTat < 1:1981395/140‑1 (MQ=255) tttCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTat < 1:2286975/140‑1 (MQ=255) tcctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGCTCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatca < 2:1937780/140‑1 (MQ=255) tcctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatca < 2:831674/140‑1 (MQ=255) tcctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatca < 2:5455506/140‑1 (MQ=255) tcctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatca < 2:3961269/140‑1 (MQ=255) tcctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatca < 2:3831139/140‑1 (MQ=255) tcctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatca < 1:5717804/140‑1 (MQ=255) gcctccGTGGTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAAGCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatca < 2:5211692/139‑1 (MQ=255) ctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatcatc < 2:4997119/140‑1 (MQ=255) ctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatcatc < 1:4702357/140‑1 (MQ=255) ctccGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTatcatc < 2:5376793/140‑1 (MQ=255) tgtTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCtt < 1:988680/140‑1 (MQ=255) tgtTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCtt > 2:1664827/1‑140 (MQ=255) gtTCATTGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTc > 1:2708204/1‑140 (MQ=255) gtTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTc > 1:4613503/1‑140 (MQ=255) gtTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGATTACCGCTTTTACACCCATCGAGCCAGACTTTCTGCCATAGCGTTATCATCACCTTc > 2:1376172/1‑140 (MQ=255) tCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCAt < 2:4250531/140‑1 (MQ=255) aaTGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGc > 1:2892316/1‑140 (MQ=255) aaTGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGc > 2:2954143/1‑140 (MQ=255) ttCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 1:1422835/140‑1 (MQ=255) ttCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 1:1847580/140‑1 (MQ=255) ttCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 2:3235612/140‑1 (MQ=255) ttCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 2:4690893/140‑1 (MQ=255) ttCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 1:4502111/140‑1 (MQ=255) ttCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 1:2852998/140‑1 (MQ=255) ttCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 1:1022982/140‑1 (MQ=255) ttCCGGCATAAAATAAATCGTCAGAGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGcac < 1:3031241/140‑1 (MQ=255) tCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCCTCGCGATCGGGAGCCCGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTCTCATCACCTTCATGCGTGcacc > 1:5341784/1‑140 (MQ=255) tCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGGTATCATCACCTTCATGCGTGcacc > 2:1476709/1‑140 (MQ=255) ggCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCaccacc < 1:1087270/140‑1 (MQ=255) aatGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGAc < 1:2967609/140‑1 (MQ=255) aatGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGAc < 1:5307164/140‑1 (MQ=255) atGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACg > 2:3056005/1‑140 (MQ=255) cAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCAGTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTGTAGATAGACGT‑CTTc > 2:5270947/1‑140 (MQ=255) aGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCa > 2:2188926/1‑140 (MQ=255) ggtgtgTCAATCCCACGATCATAATCGCGATCGGCAGCCAGATGAGCTTCCCGCTTTTCCACCCATCGAGCCATTCTTTCTGAAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCg < 2:3497973/138‑1 (MQ=255) gCTGTGTCAATCCCACGATCATAATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCTTCGAGCCATTCTTTCTGAAATAGCGTTATCATCACCTTCATGGGTGCACCACCTTTATATAGCCGT‑CGTCAAGCg < 2:577891/140‑1 (MQ=255) gtgtCAATCCCACGAGCATCATCGCGATCGGCAGCCAGATGATCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTGTCATCACCTTCATGCGTGCCCCACCTTTAGATAGACGT‑CTTCACGCGACt > 2:2283044/1‑140 (MQ=255) tgtCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTc > 1:684086/1‑140 (MQ=255) tgtCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTc > 2:689795/1‑140 (MQ=255) tgtCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTc > 2:3863704/1‑140 (MQ=255) aCGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCCCCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTGTTCTGt > 1:3728561/1‑140 (MQ=255) aCGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGt > 1:1523828/1‑140 (MQ=255) aCGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGt > 1:898933/1‑140 (MQ=255) catcatcGCGATCTGCCGCCCTATGAGGTTCCCGCTTGGCCACCCATCGAGCCTTTGTTTCTGCATTAGCGTTATCATCACCGTCATGCGTGCACCAGCTTTCGAGCGCCGT‑CTTCTAGCGACTCCGTTTTCTGTTCaaa < 1:3128789/140‑1 (MQ=255) cgctATCGGCAGCCATATGAGCTTACCGCTTTTCCCCCCTTCGAGCATTTCTTTCTGAAATAGCTTTATCATCACCTTCATGGGTGCACCCCCTTTAGATCGACGT‑ATTCAAGCGACTCCGTTTTCTGTTCAAAATGGGt < 1:1234092/140‑1 (MQ=255) gctaTCGGCAGCCAGATGCGATTACCGCTTTACCACCCAGCGAGCCATTCTTTCTGAAATCGCGTTATCATCACCTTCATGCGTGCACCCCCTTTAGATACACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAGCGGGTg < 1:1592352/137‑1 (MQ=255) gctaTCGGCAGCCAGATGAGATTACCTCTTTTCCACCCATGGAGCCATTCTTTCTGAAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTCGATAGACGT‑ATTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTg < 1:5572879/137‑1 (MQ=255) cgATCGGCAGCAAGTTGAGCTTACCGCTTTTCCACCCATCGAGCCATTGTTTCTGCAATAGCGTTATCACCACCTTCAGGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGa < 1:1181851/140‑1 (MQ=255) ctCGGCAGCCAGATGTGCTTACCGCTTTGCCCCCCAGCGAGCCATTCTTTCTGAAATAGCGTTATAATCACCTCCATGCGGGCACCCCCTTTAGATAGACGT‑CTACAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACa < 2:2584180/139‑1 (MQ=255) aGCCAGATGAGCTTACCGCTTTTCCCCCCATCGAGCCATTCTTTCGGCAATAGCGTTATAATCACCTACATGCGGGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAAt < 2:5142480/140‑1 (MQ=255) ccAGATGAGCTTACCGCTTTTCCACCCCTCGAGCCTTTATTTCTGCAATAGCGTTATCTACCCCTTACTGCGTGCACCACCTTCACATAGACCT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATcc < 1:5225802/140‑1 (MQ=255) ccAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATcc > 2:3431939/1‑140 (MQ=255) gAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTg < 2:1574599/140‑1 (MQ=255) gCTCACCGCTTTCCCACCCATCGAGCAATTTTTTCTGCAATCCCGTTACCATCACCTTCATGCGTGCACCACGTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGa < 1:4861760/140‑1 (MQ=255) ccTTACCGCTTTTCCCCCCCCCGAGCCATTCTTTCTGAAATCCCGTTATCACCCCCTGCCTGCGTGCACCACCTTTAGATAGACGT‑CTTCACGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGa < 1:379693/139‑1 (MQ=255) cTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCACATTTGGAt > 2:2739647/1‑140 (MQ=255) ttACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATa > 1:5656995/1‑140 (MQ=255) tACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATAc > 2:5525426/1‑140 (MQ=255) ccGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGGGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACaa < 2:3092652/140‑1 (MQ=255) cGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAAt > 2:4938554/1‑140 (MQ=255) cGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCACATTTGGATACAAt > 2:3368607/1‑140 (MQ=255) tttCCACCCATCGCGCCTTTCTTTCTGAAATAGCGTTATCATCACCTCCATGCGGGCACCCCCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACt < 1:2552803/140‑1 (MQ=255) tttCCACCCATCGAGCCATTCTTTCTGCAATAGCTTTATAATCACCTTCATGCGTGCACCACATTTAGATACCCGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACt < 2:2506770/140‑1 (MQ=255) tttCCACCCATCGAGCAATTCTTTCTGAAATAGCGTTATAATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTAAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACt < 1:3961407/140‑1 (MQ=255) tttCCACCCAGCGAGCCATTCTTTCTGCAATCGCGTTATCATCCCCTTCATGCGAGCACCAGCTTTAGATCGAGGT‑CTTCAAGCGACTCCGTTGTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACt < 1:317211/140‑1 (MQ=255) ttCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGTGTGACAGTCAATCCCATTTGGATAAaatcaatc > 1:3597036/1‑140 (MQ=255) ttCCACCCATCGAGCCATTCTTTCTGCAATAGCGGTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCACGCGACTCCGTTTTCTGTTCAAACTGGGTGACAGTCAATCCCATGTGGATACAATCACTc > 2:4511912/1‑140 (MQ=255) cacccaccGAGCATTTCTTTCTGAATTAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑TTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGc < 1:4226847/140‑1 (MQ=255) acccaaTCTAGCCATTGTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACATTTAGATAG‑CGTACTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGc < 1:1705168/135‑1 (MQ=255) aTCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGt > 1:4100997/1‑140 (MQ=255) aTCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGt > 1:2574762/1‑140 (MQ=255) cGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCCTTTGGATACAATCACTCAGCAATGTcc > 1:5463788/1‑140 (MQ=255) cGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTcc > 1:2409843/1‑140 (MQ=255) gcaaTTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGAACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGc < 2:4613503/137‑1 (MQ=255) gcaaTTCTTTATGCAATTGCGTTATCATACCCTTCTTGCGTGCACCACGTTTATATAGACGT‑GTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGc < 1:4004453/137‑1 (MQ=255) gCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTAAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGc < 2:2708204/140‑1 (MQ=255) ccATTCTTTCTGCAATCGCGTTATCAACACCTCCCTGCGTGCACCACCTTTAGATACACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGcc < 2:563595/140‑1 (MQ=255) caaTTCTTTCTGCACTCGCTTTATCATCACCTGCATGCGTGACCCACATTTAGATAGACGT‑CTTCACGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGcc < 2:4039796/138‑1 (MQ=255) caaTTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTAACGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGcc < 2:1314814/138‑1 (MQ=255) cATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGAGAGACGT‑CTTCACGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCa < 1:2057621/140‑1 (MQ=255) cATTCTTTCTGCAATAGCGTAATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGA‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCa < 2:1778625/140‑1 (MQ=255) cATTCTTTCTGCAAGAGCTTGATCATCACCTTCATGCGGGCACCCCCTTTCGATAGACGT‑CTACAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCa < 2:2849668/140‑1 (MQ=255) cATTCTTTCTGAAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCa < 2:4868673/140‑1 (MQ=255) cATTCTTTCTGAAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCa < 2:1849756/140‑1 (MQ=255) cATTCTTTAGGAAATAGCGTTATCATCACCTTCATGCGTGAACCACCTTTACATCGCCGT‑CTACAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCa < 1:2189059/140‑1 (MQ=255) ttctttctGCAATAGCGTTATCATCACCTTCAGGCGTGCACCACCTTTAGATAGACGG‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGt < 1:4773673/140‑1 (MQ=255) ttctttctGCAATAGCGTTAACATCACCTTCATGCGGGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGt < 2:5731265/140‑1 (MQ=255) tctttctGCAATCGCTTTATCATCACCTTACGGCGTGCACCACCTTTAGATCGACTT‑CGTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGTc < 2:3675679/140‑1 (MQ=255) tctttctGAAATAGCGTTACCATCACCTTCCTGGGTGCACCACCTTTAGATAGCCGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGTc < 1:804335/140‑1 (MQ=255) tctttatGAAATAGAGTTATCATCAATTTGTTTCGTGCACAACCTTTATATTGACTA‑ATACTAGCGACTGCGTGTTATGTTCAAAATGGGTGACAGTCTATCACATTTGGATACAATCACTCCTCAATGTCCGGCCAGTc < 2:4140931/140‑1 (MQ=255) ctttctGAACTAGCGTTATCAGAACCTTACTGCGTGCACCACCTTTAGATAGTGGA‑ATTCACGCGACTACGTTTTCTGTTCAAAATGGGTGTCAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCCGTCt < 1:5007824/140‑1 (MQ=255) tctGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCa > 1:1110665/1‑133 (MQ=255) tGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGTCTGtata > 1:4987657/1‑140 (MQ=255) tGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGTCTGtata > 1:3415561/1‑140 (MQ=255) | CGTCAGGAAGGTTTCCTCCGTGTTCAATGATTTCCGGCATAAAATAAATGGTCAGCGGCTGTGTCAATCCCACGATCATCATCGCGATCGGCAGCCAGATGAGCTTACCGCTTTTCCACCCATCGAGCCATTCTTTCTGCAATAGCGTTATCATCACCTTCATGCGTGCACCACCTTTAGATAGACGT‑CTTCAAGCGACTCCGTTTTCTGTTCAAAATGGGTGACAGTCAATCCCATTTGGATACAATCACTCAGCAATGTCCGGCCAGTCTGTATA > NZ_CP034943/3795986‑3796262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |