| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 634,064 | 0 | C | G | 31.3% | 134.3 / 12.1 | 72 | W569C (TGG→TGC) | EO946_RS03330 | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (15/31); new base G (21/0); total (41/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCC > NZ_CP034943/633925‑634202 | tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc > 2:1976781/1‑140 (MQ=255)tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCATTTTc > 2:488645/1‑140 (MQ=255) tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTCTTTTTGCATTGtt > 2:42154/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCAGTATTTttatt > 1:1906997/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTATTCAATCAGACGTAGTCGTTGGCGTTATTTCTTTTTCAATTATTTttatt > 2:1353138/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACGAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTTGTTTTCCATTATTTttatt > 1:609156/1‑140 (MQ=255) tCATGGTCTCGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttc < 1:1467081/140‑1 (MQ=255) aTAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTGTGCATTAGTTTTGGTGTACATATG‑AAc > 2:1795552/1‑140 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCGATTCTTTTTCTTATTCATATT‑AAC‑Gttt > 2:2048965/1‑140 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑Gttt < 2:1107293/140‑1 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑Gttt < 2:1054475/140‑1 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCATTATTTTTATTCTTCATATG‑AAA‑Gttttta > 2:1065567/1‑138 (MQ=255) gggATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGt < 1:27093/139‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTATATTTACATTAGTTTTATTGTTAATAAG‑AAC‑Gttttttgt > 2:1780935/1‑136 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTATTGTTCATATG‑ACA‑GTTTTGAGt > 2:1780833/1‑140 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGt < 1:1976781/140‑1 (MQ=255) aggATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGt < 2:592473/139‑1 (MQ=255) cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGc < 1:1870278/140‑1 (MQ=255) cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAAGCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGc < 1:1896056/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAAc < 1:1209870/140‑1 (MQ=255) cAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTCTTTTTCTTCTTAATATG‑AAC‑GGTTTGAGTAAGGGTTaaacc > 2:27093/1‑137 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCATTCTTTTTATTCTTCATATG‑AAC‑GTTTTGAGTCAAGCGTAAACGAAGCa > 2:399979/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGACTCGGTGGGGTTGTATTATTTTGGAGTATTTTTGATAGATATATG‑AAC‑GGTTTTGGTGAGGCTTAAACGaatct > 1:1381605/1‑137 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTACATTCTTTTTATTCTTAATATG‑TAA‑GGTTTTATTCAGGCTTAACCGAAGCAg > 2:2600/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTGCAATCTTTTTATTATTAATATG‑AAC‑GTTTTGAGTCAGGCTTAACAGAAGCat > 2:2069000/1‑139 (MQ=255) actactGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGtttttt < 1:1133901/140‑1 (MQ=255) aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACAATGTTTTTATTAATAAAATG‑AACGGTTTTGGGAC‑GGCGTAAACCAAACAGGGGTTTTTTggg > 2:257050/1‑140 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATCTG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 2:2065740/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTGTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 1:2069000/140‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTTTTTTTGCATTATTTTTGTTCTTAATATG‑AAA‑GTTTTTTGTGAGGGGTTAAAGAAACAGGCGTTTTTTGGGAt > 1:1989606/1‑140 (MQ=255) ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGGCTTGTTTTTGTTGTTAATATT‑AAA‑CTTTTTTGTCAGGGGTAAACCAAGCAGGCGTTTTTTGGGAttggt > 1:1096313/1‑137 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTGTTTTTTGAGTCTTTTTCTTCTTGAAATG‑AAA‑GTTTTTAGTAAGGCTTAACCCAAGCCGGCGGTTTTTTGGATTGctc > 1:485479/1‑140 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGGTGTTTGTTTTTCCAGTCTTTTTATTCTTAATATG‑TAA‑GTTTTTTGTCAGGCTTAACCGACGCAGGCGTTTTTTAGGATTCcta > 2:675230/1‑139 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTCTTTTTGTTCTTCATAAG‑AAC‑GTTTTGAGTCAGGCTTTACCCAAGCACGGGTTTTTTCGGAttgcga > 2:941568/1‑136 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCATTTTGCCTTCTTTTTGGTCTTAAAATG‑AAC‑CTTTTGTTTCAGGCTTTACCGAATCAGGCCTTTTTTCGGATTCcta > 2:1846141/1‑139 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGCATTGTTTTTATTATTGCTATG‑TAA‑GGTTTTTGTAAGGCTTTAACCAACCAGGCGGTTTTTAGGGttgcag > 1:1058192/1‑136 (MQ=255) aaTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCt > 2:442544/1‑140 (MQ=255) tGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTCTTTTTGCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGa > 2:414601/1‑140 (MQ=255) tGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATT‑AAC‑GTTTTTTGTCAGGCTTAAACCAAGCATTCGTTTTTTAGGGTTCCTCTTGGTGa > 2:1543253/1‑140 (MQ=255) tGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGGTTTCTTTTTCCATTCTTTTTATTCTTCATATT‑TAC‑GTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTGCTCTTTCtta > 2:2023463/1‑138 (MQ=255) ggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAt < 1:2600/140‑1 (MQ=255) aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 2:231672/140‑1 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTCTTTTTGTTATTCATATG‑AAC‑GTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTGCTCTTTGTGTTTGATTTTGTcc > 2:207156/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTATTTTTATTCTTCATATG‑AAC‑GTTTTGAGTCCGGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCGATTTGTGATTCAATTTATcc > 2:1211091/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTCTTTTTACCTTCTTTTTCTTCTTGATATT‑ACC‑GTTTTGAGTCAGGGTTAACCGAAGCAGGCGTTTTTTGGGATTGATGGTGCTGATTCAttttatgc > 2:389605/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCAGTATTTTTGTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAACCAGGCGTTTTTTAGGATTGCTGTTGCTGATTGATTTtctac > 2:1813496/1‑138 (MQ=255) tCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTGCATTCTTTTTCTTCTTCATATT‑TAC‑GTTTTTTGTCAGGCTTTACCGAATCAGGGGTTTTTTCGGATTGCGGGTGCTGATTCATTTTATCCAAtta > 2:1046039/1‑139 (MQ=255) cttcAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTGTTTTTGTTCTTCATATG‑AAC‑GTTTTGAGTGAGGCTTAAACGCAGCAGGCGTTTTTTAGGATTCCTCTTTCTGATTCATTTTGTCCAATTCAAgctgc > 2:1211969/1‑140 (MQ=255) ttcAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTACTCTTGCTGATTCATTTTGTCCAATTAAAtctgct > 2:1389918/1‑140 (MQ=255) ttcAATCCGACGGAGTCGTTGGGGTTGTTTCTTTTTGCCGTCTTTTTCTGCGTGATATG‑CAC‑GGTTTTAGTCAGGCTTAACCGAAGCCGGCGTTTTTTCGGATAACTCGTGGTGATTGATTTTCTCCAAATCAAgcggcg > 2:332095/1‑139 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 1:391026/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAGTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 1:334753/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGGTGGTTGTTTTTCCATTCTTTTTATTCTTCATATGAAAC‑GTTTT‑AGTGAAGCTTAACCGAAGCACGCCTTTTTTAGGATTGCTCTTGCTGATTAATTTTGTCCAAATTAAactgag > 2:1381470/1‑138 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:243694/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCCTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:2026008/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCAGTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 1:1211091/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTGTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 1:2021392/140‑1 (MQ=255) tCGTTGGCGTTCGTTCTTTTTCCAATATTTTTCTTCGTCATATG‑AAC‑GTTTTGAGTCAGGCATTAACGAAGCCGGCGTTTTTTCGGATTACTCTTTCTGATTCATTTTATCCAATTCAAGCTGCTCTGTTTTTTTGTCCg > 2:1799247/1‑140 (MQ=255) ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa < 2:119900/140‑1 (MQ=255) cGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCGTCACCGAACCACGCGTTTTTTCGGATTCCGCTTGCTGTTTGCATTTCTCCAATTCCACGGTCAGTGTTTTTTTCTCCGTaaaata > 2:1234158/1‑140 (MQ=255) tctttcttTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATc > 2:1950777/1‑140 (MQ=255) tctttcttTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATc > 2:1838430/1‑140 (MQ=255) tctttcttTTTCCATTCTTTTTCTTCTTCATATG‑AAA‑GTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTGCTGATTCATTTTATCCAAATAAAGCTGGTCTGTTTTTTTATCCGTATAATAATc > 1:2091384/1‑140 (MQ=255) ctttctttTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAGTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCg < 2:517920/140‑1 (MQ=255) tttctttTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 2:1983164/75‑1 (MQ=255) tttctttTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa > 1:1983164/1‑75 (MQ=255) ttctttTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa < 2:2033920/140‑1 (MQ=255) ttctttTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa < 2:1906997/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 1:593080/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:581880/140‑1 (MQ=255) tCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc < 1:207156/140‑1 (MQ=255) tCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc < 1:1762648/140‑1 (MQ=255) tCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc < 2:1518522/140‑1 (MQ=255) tCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc < 2:1218902/140‑1 (MQ=255) | TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AAC‑GTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCC > NZ_CP034943/633925‑634202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |