| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 3,940,707 | A→C | 8.2% | F314V (TTT→GTT) | frmA ← | S‑(hydroxymethyl)glutathione dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP022686 | 3,940,707 | 0 | A | C | 8.2% | 468.3 / 4.1 | 229 | F314V (TTT→GTT) | frmA | S‑(hydroxymethyl)glutathione dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (152/51); new base C (4/21); total (157/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 231 total aligned reads displayed.
TTCATGCATCAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCCGCACGCATCACG > NZ_CP022686/3940570‑3940843 | cATGCATCAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAAcgcg > 4:1157677/1‑140 (MQ=255) aTGCATCAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGAATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCgg > 3:328505/1‑140 (MQ=255) tGCATCAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGCCCTTTCACGCCGCCAAAcgcg > 2:633425/1‑138 (MQ=255) tGCATCAGGTCGAAGGCGTCAGTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGCTCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTCACTGGGATCGCCCTTTCACGCCGCCAACcgcg > 5:104262/1‑138 (MQ=255) tGCATAAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCCGTAACTGGGAACGACCTTTCACGCCGCCACAcgcg > 6:1298736/1‑138 (MQ=255) cATCAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGa < 1:1288389/138‑1 (MQ=255) cATCAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAAc < 3:958773/140‑1 (MQ=255) cATCAGGGCGATGGCGTCATTAATTTCATCCTGGCTCATGGTATGCGTGACAAACGGTTCCAGAGCGATATCACCTTTCATCGCATCTTCACCCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAAc < 8:1165979/140‑1 (MQ=255) cAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCAGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCtt > 4:976133/1‑140 (MQ=255) aGGTCGAAGGCGTCATTAATTTCATCCAGGCTCCTGGTAGGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTAAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCt > 5:762744/1‑138 (MQ=255) gTCGAAGGCGTCATTAATTTCCTCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGCCATTTCACGCCGCCAAACGCGGAACCttgcg > 3:1226509/1‑137 (MQ=255) gTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAAAGCGGAACCTTTcc > 4:471965/1‑140 (MQ=255) gAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTTACAAACGGTTCCAGATCGATATACCCTTTCATCGCATCTTCAACCATACCCGGTCACTGGGAACGACCTTTCACGCCACCAACCGCGGAACCTTTCCaaa > 8:80384/1‑138 (MQ=255) gCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGGTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACTACCTTTCACGCCGCCAAACGCGCAACCTTTCCCT‑Acg > 1:1193824/1‑138 (MQ=255) tCATTAATTTCATCCAGGCTCATGGTATGCGTGACAATCGGTTCCAGCTCGATATCACCTTTCATCGCATCTTCAACAATAACCGGTCACTGGGAACGACCTTACACGACGCCAAACGCGGAACCTTCCCAT‑ACGCGccc > 8:233843/1‑140 (MQ=255) aTTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCACCCATCCCCGGTAACTGGGAACGCCCTTTCACGCCGCCAAACGCGGACCCTTTCCAT‑ACGCGAcc > 1:104903/1‑138 (MQ=255) aTTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGCCCTTTCCCGCCGCCAAACGCGGATCCTTTCCAT‑ACGCGAcc > 2:941706/1‑138 (MQ=255) aTTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGAcc > 1:1262484/1‑138 (MQ=255) acATCCCGGCTCATGGTATGCGTGACAACCGGTTCCATATCGATATCACCTTTCATCGCATCTTCAACCAAACCCGGTAACTGGGAACCACCTTTCCCGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCaa < 3:1387638/139‑1 (MQ=255) tCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTg > 7:541169/1‑140 (MQ=255) cAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTg > 1:1431203/1‑138 (MQ=255) aGGCTCAGGGTAATCGTCAAAAACGTTGCCATATCGATATCACCTTTCAGCGCATATTCAACCATACCGGTTACCAGTGAACGAACTTTCACCCCTCAAACCGCTGAACCTTTCCAA‑ACGCGACCGGTGACCAACTgg < 6:1076541/138‑1 (MQ=255) gCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGACCCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATg > 3:364307/1‑140 (MQ=255) tCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACAGGAATg > 1:443943/1‑138 (MQ=255) tGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCTACCTTACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACTCGCAACCTTTCCTT‑ACGCGACCGGTGACCAGCTCGAATGGACgg > 8:1243875/1‑140 (MQ=255) gTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACgg > 2:496133/1‑138 (MQ=255) tATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCCT‑ACGCGACCGGTGACCAACTGGAATGGACggg > 5:4219/1‑138 (MQ=255) tGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGTGAACGACATTTCACGCCGCAAAACGCGGAACCTTTCCAT‑ACGCGACCGGAGACCACCTGGAATGGACGGGTGga > 7:1145061/1‑140 (MQ=255) tGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGCCCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGga > 7:521964/1‑140 (MQ=255) cGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGga > 5:562643/1‑138 (MQ=255) tGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGACCCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGgaga > 1:505217/1‑138 (MQ=255) aCAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTc > 7:971597/1‑140 (MQ=255) aCAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTc > 7:1169897/1‑140 (MQ=255) aCAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTCCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGAtt > 5:118282/1‑138 (MQ=255) cAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCATCTGGAATGGAGGGGTGGAGAttt > 6:788852/1‑138 (MQ=255) aaaCGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCt > 3:1345906/1‑140 (MQ=255) aaaCGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGAACGGTGACCACCTGGAATGGACGGGTGGAGATTTc > 5:1210339/1‑138 (MQ=255) aCGGTTCCAGATAGATATCACCTTTCATCGCATCTTCAACAATACCCGGTAACTGGGAACGACCTTTCACGCCGACAAACGCGCAACCTTTCCAT‑ACGCGAACTGTGCCCAAAAGGAATGGACGGGTGGAGCTTTCATGa > 8:871226/1‑140 (MQ=255) gtaacAGATCGATATCACCTTTCATCTCATCTTAAAACATACACGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCa > 4:1404985/5‑140 (MQ=255) ttCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGAcc > 5:898716/1‑138 (MQ=255) tCCATATCTATAGAACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGTAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCa < 2:651055/138‑1 (MQ=255) gccAGATCGATATCACCTTTCATCCCAGCTTCAACCATACCCGGTAACGGGGAACCCCATGTCACGCCGCCAAACGCGGAACCTTTCCAA‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCa < 6:742937/137‑1 (MQ=255) gcaaGATCTATATCACCTTTCATCGCATCTTCAACCAAACCCGGTAAGTGGCACCCACCTTTCCCCCCCCCACCCGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGa < 8:263248/137‑1 (MQ=255) ccaataTCTATATCCCTTTTCTTCGCATCTTCAACCATCCCGGTTAACTGGGAACGACATTTCACGCCGCCAACCGGGGAACTTTACCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGa < 3:618482/135‑1 (MQ=255) cataTCGATATCACCTTTCATCGCATCTTCAACCATACCCGGAAACGGGGAACTACCTTTCCCGCCGCAAAACGCGTAACCTTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGa < 2:443943/135‑1 (MQ=255) tatatCAGCTTTAATCGCTTATTAAACCATCCCGGTTAACTGGTATCTACATTACACCCCGCAAACCGCGTAACCTTTCCTT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGc < 1:248860/137‑1 (MQ=255) taaatCACCTTTCATCGCATCTTCAACCAAACCCGGTACCTGGCAACGACCTTTCACGCCGCCAAACGCGGAACCTTACCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGa < 3:1429878/137‑1 (MQ=255) atatCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCg > 1:646536/1‑138 (MQ=255) atatCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGac > 4:927660/1‑140 (MQ=255) atatCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGac > 7:579517/1‑140 (MQ=255) tatccacTTACAGCGCATCTTCACCCATCCCCTGTAACGGGCAACTACTTTTCCCGCCGCAAAACGCGTAACCTTTCCAA‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGaca < 8:1063111/134‑1 (MQ=255) tagcACCTTTCATCGCATCTTCAACCATACCCGGAAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAAGGGACGGGTGGAGATTTCCTGACCAGATCCTGCGaca < 8:894846/137‑1 (MQ=255) acaacTTTCAACGCATATTCAACCATACCCGTAACCTGGGACCTCCCTTTCACGCCGCCAACCGCGGAACCTTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACAcc < 4:701142/136‑1 (MQ=255) cACCTTTCATCGCATCTTCAACCAACCCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGCAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCg < 4:486567/140‑1 (MQ=255) ccattCATCGCATATTCACCCAAACCCGTTAACTGGGACCGACCATTCCCGCCGCCAACCGCGGACCCTTCCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCg < 6:470165/135‑1 (MQ=255) ccTTTCATCGCATCTTCAACCATACCCGGTAACTGGGCACGACCTTTCCCGCCGCCCAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGCTTTCCTGACCAGATCCTGCGACACCgat > 7:883190/1‑140 (MQ=255) tCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCa > 1:748819/1‑138 (MQ=255) cATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGCGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGAt > 3:902163/1‑140 (MQ=255) atatacAACCATACCCGGAAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCAAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGAtt < 4:439374/135‑1 (MQ=255) aTCTTCAACCTTCCGCGGTAAGGGGGAACGACATTTCACGCCCCCAAACGCGGAACCTTCACAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGa < 2:356063/138‑1 (MQ=255) aTCTTCAACCATACCCGGTACCTGGTAACCACATTTCACGCCGCCAAACGCGGAACCTTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGa < 5:333083/138‑1 (MQ=255) aTCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGCTACTGCGACACCGATGATCACCGAtt > 4:61809/1‑140 (MQ=255) aTCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGc < 4:1389368/120‑1 (MQ=255) cTTCAACCATACCCGGTAACTGGGAACGCCCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGCCACCGATGATCACCGATTgc > 7:686596/1‑139 (MQ=255) tacacccATACCCGGTAAGTGGGACCGACCTTTCACCCCCCCAAACGCGTAACCTTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTg < 6:1116271/133‑1 (MQ=255) aacAACCAAACCCGGTAACTGGGAACCACATTTCACGCCGCCAAACGCGGAACCTTACCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGAc < 3:691230/138‑1 (MQ=255) aaaCCATACCCGGTAACTTGTAACGACCTTTCACGCCGCCAAACGCGTAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGAccc < 4:559612/139‑1 (MQ=255) aCCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGCCCCCAGCcgc > 3:1300870/1‑140 (MQ=255) aCCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCAAT‑ACGCGACCGGTGACCTACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGCTGATCACCGCTTGACCCCAGCcgc > 7:397364/1‑140 (MQ=255) cccGGTAACTGGGAACGACCTTTCACGCCGCCAACCGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACCCCGATGATCACCGATTGACACCAGCcgcg > 7:313769/1‑140 (MQ=255) ccGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCcgc > 1:67063/1‑138 (MQ=255) ccGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCcgc > 2:163598/1‑138 (MQ=255) ccGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCcgc > 2:556310/1‑138 (MQ=255) cGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGCCCCCAGCCGCGGt > 7:1323227/1‑140 (MQ=255) aaatttggAAGGACCTTTCCCGCCTCCAAAGGCGGAACATTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACGCCAGCCGCGGTg < 6:835124/132‑1 (MQ=255) aaaCTGGGAACCCCCTTCCCCGCCCCCAACCGCGCAACCTGACCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTg < 6:157931/137‑1 (MQ=255) cctgctaaCCACCTTTCCCGCCCACAAACCCGCAACC‑TTCCATAACGCGACCGGTGACCAACTGGAATGGACGGGTGGATATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTgcg < 5:667873/132‑1 (MQ=255) ccTGGCAACCACCTTTCACGCCGCCAACCGCGGAACCTTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATTATAACCGATTGACCCCAGCCGCGTTgatgt < 3:25053/139‑5 (MQ=255) ccTGGAAACCCCCTTCCCCGCCCCAAACCGCGGAACCTATCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTgcg < 1:230764/137‑1 (MQ=255) aCTGGGAACGCCCTTTCCCGCCGCCACCGGCGTAAGCTTTCCTT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTgcg < 2:41808/138‑1 (MQ=255) aCTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGATATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTgcg > 6:143391/1‑138 (MQ=255) aCTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCAAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCa < 8:578780/140‑1 (MQ=255) ggAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACttt > 7:203071/1‑140 (MQ=255) caaCGCCCTTCCCCGCCGCCAACCGCGGAACCTTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACtt < 2:1069228/137‑1 (MQ=255) aaCGCCCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCCCttt > 5:197231/1‑138 (MQ=255) aaCGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACttt > 5:453349/1‑138 (MQ=255) ccTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCCgcgc > 4:39930/1‑140 (MQ=255) tttCCCGCGGCCACACGCGTAACCTTACCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAgcgc < 1:846396/138‑1 (MQ=255) tCACCCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACAAACATGAATGGACGGGTGGTGATTTCCTGACCAGAACCTGCGACACCGATGATCACCCAATGACCCCAGCCTCGGTGCGCACTTTCCAGcgccgcc > 4:272069/1‑139 (MQ=255) ccACGCCGCCACACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGcgccg < 2:82806/137‑1 (MQ=255) gccgccAAACGCTGAACCTTTCCTT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCAGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCcgcacg < 6:352500/138‑1 (MQ=255) gccgcaAACCGCGGAACCTTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCcgcacg < 2:1287451/138‑1 (MQ=255) gccgcaAAACGCGGAACCTTTCCAA‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCcgcacg < 6:948634/138‑1 (MQ=255) ccctccAAACGAGTAACCTTACACT‑ACGCGACCGGTTACCAACTGGAATGGACTGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCcgcacgca < 8:1210030/136‑1 (MQ=255) cccgcaAAACGCGTAACATTTCCAT‑CCGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCcgcacgca < 7:34826/139‑1 (MQ=255) ccgccAACCGCGGAACCTTTCCAA‑ACGCGACCGGGGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCCGCACGCAt < 7:260812/140‑1 (MQ=255) cgccAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCCGCACGCATc > 7:1098749/1‑140 (MQ=255) ccAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCCGCACGCATc > 6:268130/1‑138 (MQ=255) ccAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCCGCACGCATc > 2:1197039/1‑138 (MQ=255) cAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCCGCACGCATCa > 6:1195084/1‑138 (MQ=255) | TTCATGCATCAGGTCGAAGGCGTCATTAATTTCATCCAGGCTCATGGTATGCGTGACAAACGGTTCCAGATCGATATCACCTTTCATCGCATCTTCAACCATACCCGGTAACTGGGAACGACCTTTCACGCCGCCAAACGCGGAACCTTTCCAT‑ACGCGACCGGTGACCAACTGGAATGGACGGGTGGAGATTTCCTGACCAGATCCTGCGACACCGATGATCACCGATTGACCCCAGCCGCGGTGCGCACTTTCCAGCGCCGCACGCATCACG > NZ_CP022686/3940570‑3940843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |