| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 2,171,262 | C→A | 11.9% | F147L (TTC→TTA) | CJ019_02060 → | IS1182 family transposase ISPpu16 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 2,171,262 | 0 | C | A | 11.9% | 265.5 / 6.4 | 134 | F147L (TTC→TTA) | CJ019_02060 | IS1182 family transposase ISPpu16 |
| Reads supporting (aligned to +/- strand): ref base C (74/42); new base A (2/16); total (76/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.02e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
GGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGC > ACB143/2171127‑2171393 | atctCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCa < 6:67384/132‑1 (MQ=255) tttCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCaaa < 7:212678/136‑1 (MQ=255) ccGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTTCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑cg > 3:163363/1‑136 (MQ=255) ccGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑cg > 8:9148/1‑136 (MQ=255) ccGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCAGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGGTCAAA‑GCAGTGCACAAT‑cg > 7:339428/1‑136 (MQ=255) cGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGt > 1:172810/1‑135 (MQ=255) aaGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACt > 7:198142/1‑136 (MQ=255) ggACAACGGTAAAGCCATTGGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTTAACAAT‑CGCGACCGTAACTTc < 7:386734/136‑1 (MQ=255) ggAAAACGTTAAAGCCATTCGTAGCGTCTGCCGTCAGTTGGTGATCCTCTGCCTTAAC‑CTCAACCTTTTCTCTTTGTCTATCATTGCC‑ATCGAC‑GGCAGCAATTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTc < 8:204632/136‑1 (MQ=255) gttAAAGCCATTCGTCGCGTCTGCCGTCTGTTCGTGAGCCTGTGCCTTAAC‑CTCAACCTTTTCTCTGTGTCCATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAgg < 7:298512/134‑1 (MQ=255) ggaaaaGCAATTCGTCGCGTCTGCCGTCTGTTCGTGATCCTCTGCCGAAAC‑CTAAACATTTTCTCTGTGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTAAAA‑GCAGTCAAAAAC‑CGCGACCGTAACTTCACCCAgg < 8:1547/133‑1 (MQ=255) ggTAAAGCCATTCGTAGCGTCTGCCGTCTGTTCTTTACCATATGCCGAAAC‑CTCAACCTTTTCTCTGCTGCGATAATTGCC‑ATCGCC‑GGCAGCACGTTAAAA‑GCTTTTAAAAAT‑CGCGACCGTAACTTCACCCAgg < 2:94490/136‑1 (MQ=255) ggTAAAGCAATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTCAACAAT‑CGCGACCGTAACTTCACCCAgg < 7:382812/136‑1 (MQ=255) acccATTCGTCGCGGCTGCCGGCAGTGCGGCAGCCTCTGCCGAACC‑CTCAACCTTTGCTCTGAGGCTATCATGCCC‑ACCGCC‑GGCAGCATTTACAAC‑GCCGTCAAAAAC‑CGCGACCGTAACTTCACCCAGGCCAAg < 8:17820/134‑1 (MQ=255) aGCCATTCGTCGGGTGTGCCGGCTGTTCGTGATCCTCTGCCTAAAC‑CTCAACATTTTTTCTGAGTCCAACATTCCC‑ATCGAC‑GGCAGAAAGTACAAA‑CCTGTCAAAAAC‑CGCGACCGTAACTTCACCCAGGCCAAg < 2:141026/136‑1 (MQ=255) gCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTAAAA‑GCATTGAAAAAT‑CGAGACCGTAACTTCACCCAGGCCAAgg > 5:64226/1‑136 (MQ=255) ccATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGt > 1:287091/1‑136 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTTCC‑ATCGAC‑GGCAGCAAGTACAAA‑CCAGTTAACAAT‑CGCGAACGTAACTACCCCCAGGCCAAggg > 6:127042/1‑134 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGTACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTg > 2:381102/1‑136 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGt > 4:189149/1‑135 (MQ=255) ttCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCCGCAAGTTCAAA‑GCAGTGAACAAT‑AGCGACCGTAACTTCACCCAGGCCAAGGTg > 6:61750/1‑134 (MQ=255) cGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAgg > 7:308721/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTACC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GAAGTGAACAAT‑CGCGACCGTATCTTCACCCAGGCCAAGGTGAAGGc > 6:361580/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTTCC‑ATCGAC‑GGCAGCAACTTCAAA‑GCAGTGAACAAT‑CGCTACCGTAACTTCACCCAGGCCAAGGTGAAGGc > 7:28842/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGc > 8:371150/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGc > 6:137885/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAAATTCACACAGGCCAAGGTGAAGGc > 6:307106/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAAAAAT‑CGCGACCGTAACTTCACCCAGCCCAAGGTGAAGGc > 6:353421/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAA‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGACAAGGTGAAGGc > 4:139861/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCAGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑AGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGc > 2:67263/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTACGTGATCCTCTGCCGTAAC‑CACAACCTTTTCTCTGAGTCGATCATTGCC‑AACGAC‑GGCCGCAAGTTCACA‑GCAGAGAACAAT‑CGCGACCGTAACTTCCACCACGCCAAGGTGCAGGc > 4:230278/1‑136 (MQ=255) tCTGCCGTCTGTTCGTGATCTCCTGCCGAAAC‑CACAACCTTTTCTGTGAGTCTATCATTGCC‑AGCGAC‑GGCAGAAAGTACAAC‑GCCGTCAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCAt < 2:172810/136‑1 (MQ=255) cTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATg > 3:245150/1‑136 (MQ=255) cTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATg > 2:72223/1‑136 (MQ=255) tGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATg > 3:369651/1‑135 (MQ=255) gCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGCC‑GGCAGCAAGTTCAAA‑GCAGTGAAAAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATg > 7:150202/1‑134 (MQ=255) gCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGCAAAAT‑CGCGACCGTAACTTCAACCAGGCCAAGGGGCAGGCCCGCATggc > 2:208589/1‑134 (MQ=255) cGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATgcag > 6:397775/1‑135 (MQ=255) acAGTTCGTGACCCTCTGCCGAACC‑CACAACATTTTCTCTGAGCCGAAAATTCCC‑ATCGAC‑GGCAGCAAGTGAAAA‑GCAGTCAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCaa < 5:62223/135‑1 (MQ=255) ttCGTTATCCTCTGCCTAAAC‑CAAAACTTTTTCTCTGAGTCTATAATTGCC‑AGCGAG‑GGCAGCAAGTAAAAA‑GCTGTCAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCg < 8:82901/136‑1 (MQ=255) tgttGATCCTGTTCCTTAAC‑TTAATNATTTTNTCTGTNTCTTACATTCCA‑TTCGAG‑GGAAGCATTTTAAAA‑CCTTTAAACAAA‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCg < 2:361344/132‑1 (MQ=255) tCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATc > 5:396453/1‑134 (MQ=255) gcGTGAGCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGGCGATCATGGCC‑ATCGAC‑GGCAGCAAGTTCAAC‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCg < 8:125500/134‑1 (MQ=255) ggTGATCCTCTGCCGTAAC‑CTCAACCTTTTGTTTGTTTCTTTAATTGCC‑TTTGAG‑GTCAGAAATTTAAAA‑CCATTTAAAAAA‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 4:153157/134‑1 (MQ=255) ctttaTCCTGTGCCGTACC‑CTCAACTTTTTCTCTGAGGGGATAATGTCC‑ATCGAC‑GGCATCATGTTCAAA‑GCAGTTAAAAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 8:298047/131‑1 (MQ=255) cGTGATCCTCTGCCGTAAC‑ATCAACCTTTTCTCTGAGTCTATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTTAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 4:226778/135‑1 (MQ=255) tttaggctctGACGAAAC‑CTAACCATTTTCTTGTCGTCTATCATTG‑C‑ATCACCGGGCATAAATTTCAAA‑GCTGT‑AACAATCCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagc < 4:100778/130‑1 (MQ=255) acccTCTCCCGTAAC‑CACACCGTTTTCTCGGCGCCAAGAATTCCC‑ATCGAC‑GGCAGAATTTAAAAA‑CCATTAAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagcaga < 3:340583/134‑1 (MQ=255) tCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGCGTCGATCATTTCC‑ATCGCC‑GGCAGCAAGTTAAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgctcagag > 5:202367/1‑136 (MQ=255) tCCTCTGCC‑TAACACTCAACATTTTCTCTGAGTCTATAATTGCC‑ATCGAG‑GGCAGCAAGTTCAAA‑GCAGTAAAAAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagcaga < 3:230424/135‑1 (MQ=255) accTCTGCCGTCAC‑CACACCATATCATCTGAGCGGATCTTACCC‑ATCCAC‑GGCTCCAAGATCACA‑GCAGTAAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagcagag < 2:384008/135‑1 (MQ=255) ccTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGAAAATCgagcagag > 3:284279/1‑135 (MQ=255) ccTCTCCCTAAAC‑CACAACTTTTACTCTGTGTCCATAATTGCC‑ATCGAG‑GGCAGCAATTTCAAA‑CCAGTAAACAAA‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagcagagc < 4:370516/136‑1 (MQ=255) ccTCGGCGGAAAC‑ATCAACTTTTTCACGGAGTCCATCATTGCC‑ATCGCC‑GGCAGC‑ATTTCAAACCCAGGTAAAAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCGGCATGCAGCAAATCgagcagagc < 7:182915/136‑1 (MQ=255) gcctaaaC‑CTCAACCTTTTATCTGCGCCCACCATTGCC‑ATCTAG‑GGCAGCATGTTAAAA‑GCTTTCAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 6:333171/131‑1 (MQ=255) gccgacaC‑CTAAACCTTTTCCATCAGGCCATCATTCCC‑ATCCAG‑GGCACCAAGTACAAC‑CATGTCAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 4:79656/130‑1 (MQ=255) gCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATAGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCAtt > 1:361344/1‑134 (MQ=255) gCCGTAAC‑CTAAACTTTTTCTCTGAGCCGATATTTGCC‑ATGCAG‑GGAAGAATTTTAAAA‑GCATTCAAAAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 3:374438/136‑1 (MQ=255) gCCATACC‑CTCACCCTTTTCTCTCCGTCGAGAATTGCC‑AGCGAG‑GGCAGCATGTTCAAC‑GCAGTCAACACC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 6:360310/136‑1 (MQ=255) cccGTAAC‑CCCAACATTTTCTCTGCGTC‑CTAAATGCCAAGCTCG‑GGCAGAAATTACAAA‑CCAGTCAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 4:201381/135‑1 (MQ=255) ccttAAC‑CTCAACTTTTTCTCTGAGTCTATCTTTCCC‑ATCGAC‑GCCAGAAATTCAAAA‑CCAGTCAAAAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 4:90643/132‑1 (MQ=255) tAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCCCCCAGGCCAAGGTGAAGGCCCGCAGGCAGCAAATCGAGCAGAGCATTGAgcgc > 8:136169/1‑136 (MQ=255) c‑cTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGCGCGCTAc > 8:144184/1‑136 (MQ=255) c‑cTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTAc > 8:374225/1‑136 (MQ=255) c‑cTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTAc > 3:370020/1‑136 (MQ=255) cTCAACTTTTTCTCTGAGTCGATCATTCCC‑ATCGCC‑GGCAGCAATTTAAAA‑GCAGTCAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTAcc < 5:116875/136‑1 (MQ=255) tCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GCCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTAACCCAGGCCAAGGTGAAGGACCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCAAcc > 6:37792/1‑135 (MQ=255) cTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTCCCTTACAg > 1:22893/1‑136 (MQ=255) cTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAg > 2:390979/1‑136 (MQ=255) cTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAg > 3:187057/1‑136 (MQ=255) cTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAg > 3:201240/1‑136 (MQ=255) cTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAg > 7:62106/1‑136 (MQ=255) cTTTTCTCTGAGTCGATCATAGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAAAAAT‑CGCGACCGTAACTTCACCCAGGGCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAg > 3:65070/1‑136 (MQ=255) ctctGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATg > 5:322579/1‑136 (MQ=255) tctGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATAGAGAGATACCTTACAGCGATg > 8:222099/1‑135 (MQ=255) ctGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGa > 1:353894/1‑136 (MQ=255) gatgctaTCATTCCC‑TTCCAG‑GGAAGCATGTACAAA‑GCCTTCAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGAt < 1:365592/129‑1 (MQ=255) aGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCACTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTc > 4:196411/1‑136 (MQ=255) tCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCgg > 4:115007/1‑136 (MQ=255) tCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCgg > 4:109155/1‑136 (MQ=255) cGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCTACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGAATTGAGCGCTACCTTACAGCGATGGATTCgg > 5:206721/1‑135 (MQ=255) cGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCgg > 7:169418/1‑135 (MQ=255) cGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCgg > 3:214174/1‑135 (MQ=255) cGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGc > 2:173300/1‑136 (MQ=255) aTTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGAcc > 4:315913/1‑136 (MQ=255) aTTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGAATTGAGCGCTACCTTACAGCGATGGATTCGGCAGAcc > 5:177696/1‑136 (MQ=255) ttccc‑AGCGAC‑GGCAGCAAGATCAAA‑CCAGGGAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCGAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCg < 5:125315/133‑1 (MQ=255) ttGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa > 6:93790/1‑103 (MQ=255) ttGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:93790/103‑1 (MQ=255) tccc‑ATCGAC‑GGCAGCATGTTCAAA‑GACGTCAAAAAG‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCg < 2:238407/133‑1 (MQ=255) c‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGc > 7:55805/1‑135 (MQ=255) aTCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCaa < 8:37452/136‑1 (MQ=255) aC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGcc > 5:211735/1‑136 (MQ=255) aC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGcc > 6:168737/1‑136 (MQ=255) gcagcaAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCg > 6:209519/1‑134 (MQ=255) caATTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTg < 8:261731/136‑1 (MQ=255) caAGTTCACA‑GCAGTCACAAAA‑CGCGACCGTAACTTCACCCAGGCCAAGGTTAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTg < 8:146538/136‑1 (MQ=255) caAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTg > 7:322900/1‑136 (MQ=255) aaGTTAAAA‑CCAGCCAACAAC‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTg < 5:148875/135‑1 (MQ=255) gTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGc > 8:275206/1‑135 (MQ=255) | GGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAC‑CTCAACCTTTTCTCTGAGTCGATCATTGCC‑ATCGAC‑GGCAGCAAGTTCAAA‑GCAGTGAACAAT‑CGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGC > ACB143/2171127‑2171393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |