| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,629,176 | (T)7→8 | pseudogene (141/392 nt) | ydeI ← | YdeI family stress tolerance OB fold protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,629,169 | 1 | . | T | 97.9% | 903.5 / 8.0 | 238 | pseudogene (148/392 nt) | ydeI | YdeI family stress tolerance OB fold protein |
| Reads supporting (aligned to +/- strand): ref base . (1/4); new base T (78/155); total (79/159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 260 total aligned reads displayed.
GACGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑TTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAA > NZ_CP025268/1629030‑1629300 | gACGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑a > 1:926680/1‑140 (MQ=255) aCGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑t < 1:9807556/140‑1 (MQ=255) cGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑ttttt‑t < 1:5170515/140‑1 (MQ=255) cAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑ttttt‑ttt > 2:4096057/1‑139 (MQ=255) cAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑ttttt‑ttt > 2:9224462/1‑139 (MQ=255) ggAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑ttttt‑tttgc < 1:2114724/140‑4 (MQ=255) aaCGACCTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGcatcat < 2:10087462/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGcatcat < 1:7490966/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGcatcat < 1:6870267/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGcatcat < 1:2982366/140‑1 (MQ=255) tAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCcg < 1:345287/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGTTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAg < 2:3849092/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAg < 2:10373851/140‑1 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑ttttt‑tttgc > 1:1157899/1‑117 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑ttttt‑t < 2:1879955/116‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCgg > 1:8534782/1‑127 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCgg < 2:8534781/127‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGcc < 2:444161/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtc < 1:3932302/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtc < 1:444664/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtc < 1:8213658/140‑1 (MQ=255) cacctATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtc < 2:8415806/136‑1 (MQ=255) tctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtct < 2:7498393/140‑1 (MQ=255) tctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCAGCGATAGCCAtct > 2:1169450/1‑140 (MQ=255) ctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtctt < 2:5014488/140‑1 (MQ=255) ctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtctt < 2:1117374/140‑1 (MQ=255) tATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtcttct < 2:4519875/140‑1 (MQ=255) tATCGAGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAATTCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCAtcttct < 1:914671/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAACTCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGAGAGCCATCTTCTa > 2:5738514/1‑140 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTa < 1:6500514/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTa < 2:165471/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTa > 2:2504693/1‑140 (MQ=255) gcgAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑ttttt‑tttgc > 1:8933228/1‑105 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:5521762/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:1907042/140‑1 (MQ=255) cGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 2:8950234/140‑1 (MQ=255) cGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 2:8629253/140‑1 (MQ=255) cGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 1:7191849/140‑1 (MQ=255) gTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGACGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGGTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 2:8075067/140‑1 (MQ=255) gTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 2:778443/140‑1 (MQ=255) tCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCcgcg < 2:285324/107‑1 (MQ=255) tCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTgg > 2:2967683/1‑140 (MQ=255) ctctCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGgcg < 1:6788627/140‑1 (MQ=255) ctcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCt < 2:7302417/140‑1 (MQ=255) tcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTg < 1:9193981/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:5925271/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:7338414/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc > 1:9863531/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGcc < 1:1341923/103‑1 (MQ=255) gaAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGttt > 2:6516077/1‑140 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCa > 1:3121943/1‑97 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 1:3983548/122‑1 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg > 2:3983548/1‑122 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTa > 1:2808652/1‑140 (MQ=255) tCAAATTACCGCTTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGAGAATTATACGGTCTT‑TTTTT‑TTGCATCATCTGTTCCGCGATAGCCATCTTCTATTGCATGAGGAGGCGGTGGCGCTGCATCCTGTTTTaaa < 1:9605403/140‑1 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 2:1384345/140‑1 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 1:10635931/140‑1 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 1:10732017/140‑1 (MQ=255) cAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAc < 1:385382/140‑1 (MQ=255) cAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAc > 1:435056/1‑140 (MQ=255) ttACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGcc < 1:8769188/140‑1 (MQ=255) aCCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCt < 1:1049902/140‑1 (MQ=255) gcgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGt < 1:7853783/140‑1 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTc > 2:2387876/1‑140 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTc > 2:6919900/1‑140 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTc > 1:2016292/1‑140 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTc > 1:5481641/1‑140 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:7980504/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc > 2:10517919/1‑140 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:7046286/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGACATCAACGGTC‑ATTTTTT‑TTGCATCATCGGGTCCGCGATAGCCATCTTCTAGTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 2:554302/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 1:1388379/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 2:9428279/140‑1 (MQ=255) aCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCaa < 1:502781/140‑1 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggc < 2:3313085/89‑1 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa > 2:299696/1‑140 (MQ=255) aGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCAt < 2:2016292/140‑1 (MQ=255) cATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGc < 2:365110/140‑1 (MQ=255) cATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGc < 2:7369968/140‑1 (MQ=255) aTCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCa > 2:8163040/1‑140 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 1:4963335/140‑1 (MQ=255) cATGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACaa > 1:9523981/1‑140 (MQ=255) tGGTTTTTGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGa > 2:605730/1‑140 (MQ=255) tttttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:5481641/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:5064862/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:6047742/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:1518110/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:4338984/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:6046623/140‑1 (MQ=255) tttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACt < 1:1025152/140‑1 (MQ=255) tttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACt < 1:1606941/140‑1 (MQ=255) tgtGCGCAATCAACGGTC‑A‑TTTTTAGTGCATCATCGGTTCCGCGAGAGCCATCTTCTAGTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACt < 2:8918404/138‑1 (MQ=255) ttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAg > 2:9693149/1‑47 (MQ=255) ttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCACCGGTTCCGCGATAGcc > 2:1767825/1‑49 (MQ=255) ttGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCACCGGTTCCGCGATAGcc < 1:1767825/49‑1 (MQ=255) tGCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTg < 2:1744614/140‑1 (MQ=255) gCGAAATCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGc < 1:3391626/140‑1 (MQ=255) gAAATCAACGGTC‑ATTTTTT‑TTGCATCAGCGGGTCCGCGATAGCCATCTTCTAGTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTCAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTa < 2:10261658/140‑1 (MQ=255) aTCAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:2398708/78‑1 (MQ=255) cAACGGTC‑ATTTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACa < 2:2275838/140‑1 (MQ=255) | GACGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑TTTTT‑TTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAA > NZ_CP025268/1629030‑1629300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |