| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,815,859 | Δ82 bp | [rph]–[rph] | [rph], [rph] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3815859 | 3815940 | 82 | 54 [0] | [0] 52 | [rph]–[rph] | [rph], [rph] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3815858 | 0 (0.000) | 50 (0.730) | 32/276 | 0.8 | 100% | pseudogene (24/48 nt) | rph | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH |
| ? | NC_000913 | 3815941 = | 0 (0.000) | pseudogene (609/669 nt) | rph | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH | |||||
TCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCG > NC_000913/3815792‑3816089 | aactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCg < 2:491944‑M2/2‑1 (MQ=255)aactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCg < 1:955727‑M2/2‑1 (MQ=255) taacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑cccc < 2:940010‑M2/7‑1 (MQ=255) cctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCa > 1:808176‑M2/140‑150 (MQ=255) ttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCaa < 1:588304‑M2/17‑1 (MQ=255) tgctaagcgcaaattcaataaactggcgctgatatgggttcatgcctgcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaacaatcagtttgccagctccgccttctgcCGT‑CCCCTGCACTTCAat > 2:50781‑M2/134‑151 (MQ=255) ctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAatga < 1:747113‑M2/20‑1 (MQ=255) ctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAatga < 1:369351‑M2/20‑1 (MQ=255) ctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAatga < 1:1007640‑M2/20‑1 (MQ=255) gcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATgcgc > 1:49891‑M2/126‑150 (MQ=255) caaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGccc < 1:15412‑M2/27‑1 (MQ=255) caaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGcc > 1:548463‑M2/125‑150 (MQ=255) aattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGt > 1:822284‑M2/123‑151 (MQ=255) caataaactggcgctgatatgttttcatgccttcgctcctcatcttacttgtctacagacaaaaaaaaggcgactcatcggtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGc < 2:476869‑M2/10‑1 (MQ=255) caataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggggactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCtt > 2:830259‑M2/119‑150 (MQ=255) caataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGc > 1:477070‑M2/119‑128 (MQ=255) ataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgcctgctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTGTTCgg < 2:418589‑M2/35‑1 (MQ=255) aactggcgctgatatggtttcatgccttcgttcctcatcttacttttctacagacaaaaaaaaggcgactcattagttgccttaaaaatcagattgccagagccgtcttctgcCGT‑CCCCTGAACTTCAATGATGTGCCCGTCTTTGGtca > 2:1152348‑M2/114‑151 (MQ=255) aactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCAc > 2:413856‑M2/114‑125 (MQ=255) aactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCAc < 1:414013‑M2/12‑1 (MQ=255) aactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGtca < 2:342398‑M2/38‑1 (MQ=255) gcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCAc < 1:43909‑M2/42‑1 (MQ=255) gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaatgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACCACGt > 2:234200‑M2/104‑150 (MQ=255) gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt > 1:279326‑M2/104‑151 (MQ=255) gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt > 1:103898‑M2/104‑151 (MQ=255) gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt > 1:820478‑M2/104‑151 (MQ=255) gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt > 1:632091‑M2/104‑151 (MQ=255) gatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGACCGTCTTCGGTCATCACTACg > 2:872928‑M2/104‑149 (MQ=255) gatatggtttcatgccttcgctcctcatctaacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCTCCCGTCTTCGGTCATCACTACGtt > 2:376622‑M2/104‑151 (MQ=255) gtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGt < 1:905649‑M2/53‑1 (MQ=255) ctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCa > 1:99802‑M2/84‑151 (MQ=255) ctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCag > 1:719286‑M2/84‑151 (MQ=255) cctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCagag < 2:403537‑M2/70‑1 (MQ=255) catcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCt < 1:1146001‑M2/73‑1 (MQ=255) tacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAGTGATGCGCCCGTCTTCGGTCATCACTACGTTCATTTCGGTCTCTGCGGCAGAGTCTTCAAc < 2:369702‑M2/78‑1 (MQ=255) cttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGt < 2:741902‑M2/80‑1 (MQ=255) cttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGt < 1:15579‑M2/80‑1 (MQ=255) ctttgcgccagacaaaaaaaaagcgactcatcagtcgccttaaaaatcagtgtgccagcgccgccttctgcCGG‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCTCTACGTTCATGTCGGTCTCTGCGGCAGAATCATCaactt < 2:752031‑M2/80‑3 (MQ=255) attatatacagacaggcaaaaggcgccacaacagtcgccataaaaatcagtttgccagcgccgacttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGt < 2:131958‑M2/80‑1 (MQ=255) tctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAtt > 1:520922‑M2/68‑150 (MQ=255) aaaaggcgactcatcagacgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAcc < 2:979735‑M2/97‑1 (MQ=255) gactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCg > 1:1097931‑M2/48‑150 (MQ=255) actcatcagtcgccttaaaaatcagtttgccggcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGc < 1:80084‑M2/104‑1 (MQ=255) actcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGC‑CTCCTGCACTTCAATGATGCCCCCGCCTTCGGTCATCACCACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGc > 2:809763‑M2/47‑150 (MQ=255) acgccacagtcgacttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGGATTCCAGATCGCAAACCGCTTCGc < 1:1152893‑M2/104‑1 (MQ=255) tcgccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcaca < 2:498343‑M2/112‑1 (MQ=255) ccttaaaaatcagtttgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc > 1:984929‑M2/35‑150 (MQ=255) tccgtataatgcgccgccttctgcCGT‑CCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAAc < 1:686300‑M2/126‑1 (MQ=255) tgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCgg > 1:982634‑M2/20‑150 (MQ=255) tgccagcgccgccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCgg > 1:92624‑M2/20‑150 (MQ=255) nccttctgcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATcc > 1:317800‑M2/10‑149 (MQ=255) gcCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCg > 1:991429‑M2/3‑151 (MQ=255) | TCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGT‑CCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCG > NC_000913/3815792‑3816089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |