| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 540,558 | 0 | T | G | 44.6% | 109.1 / 46.0 | 93 | intergenic (+50/‑7) | allB/ybbY | allantoinase/putative uracil/xanthine transporter |
| Reads supporting (aligned to +/- strand): ref base T (13/38); new base G (41/0); total (55/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.54e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACG > NC_000913/540409‑540705 | tATCACGAAAACCATCTTACGTGGTGATGTGATTTACTACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTGATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGgtg < 1:336000/151‑1 (MQ=255) cGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTT‑AGGTGTGTTTa < 2:1435624/151‑1 (MQ=255) aaaaCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTa < 1:1138064/150‑1 (MQ=255) aaaaCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTa < 2:1145014/150‑1 (MQ=255) aaaaCCATCTTACGTGGTGATGTGATTTACGACATTGAACAAGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTC‑CCGGTTACGGGGGGGTTAt > 2:1075756/1‑151 (MQ=255) aaaCCCTCTTTCGGGGGGATGTGATTTACGGCATTGAACAGGGCTTTCCTGTTGGGGCGAAAGGGCAAATTTTCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATg < 2:224803/151‑1 (MQ=255) ccATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGCTTCT‑CCGGTTAAGGGGTGGTTATGttt > 1:546674/1‑150 (MQ=255) ccATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTc < 2:1295439/151‑1 (MQ=255) aTCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCCGTTAAGGGGTGTTTTTGTTCaa > 2:472973/1‑151 (MQ=255) cTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTTTCCCGCTTAAGGGGGGttttgtttacat > 1:806643/1‑142 (MQ=255) cTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGCTCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAAtt > 1:1179662/1‑151 (MQ=255) ttACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAAttt < 2:33874/151‑1 (MQ=255) tACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCCGTTAAGGGGGGGTTTTTTTCAAtttt > 2:961303/1‑151 (MQ=255) aCGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATg < 1:1384090/141‑1 (MQ=255) aCGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGGGTTTATgctggctcttt > 2:1384778/1‑141 (MQ=255) cGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGc < 1:729874/151‑1 (MQ=255) cGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGc < 2:569292/151‑1 (MQ=255) tggtgATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAg < 2:243188/151‑1 (MQ=255) gtgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTT‑CCGGTTAAGGGGGGTTTATTTTCAAtttttccgg > 2:565180/1‑145 (MQ=255) gtgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTT‑CCGGGTAAGGGGGGGTTTTTTTCAATTTTTCAGt > 2:525887/1‑150 (MQ=255) gatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGATTCT‑CCCGGTATGGGGGGTTTATGTTTTAttttttaggtag > 1:959296/1‑143 (MQ=255) gatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTTAGGGGTGGTTTTGGTCAATTTTGCAGTCA‑GCcgcg > 2:51870/1‑151 (MQ=255) atTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCCGGTTAGGGGGGGTTT‑TGTTCAATTTTGCTGCCA‑GCcgcca > 1:493722/1‑149 (MQ=255) cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGcc < 2:1486175/151‑1 (MQ=255) aCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCT‑CCGGTTAAGGGGTGGTTTTGTTCAATTTTGCAGTCA‑GCCGCCAAAGc > 1:554847/1‑148 (MQ=255) aTTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTTAGGGGTGTTTTTGTTCAATTTTGCCGTCA‑GCCGCGAAAGCCTGtt > 2:220169/1‑151 (MQ=255) aTTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTTTGTTCAATTTTGCCGGCA‑GCCCCGAAAGCCTGtt > 2:464313/1‑151 (MQ=255) gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCTGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGTGATTCT‑TCTGCTTAGGTGTGGTTTTGTTTTTTTTTTCAGCCA‑GCCGCGcaattccgcttt > 1:650346/1‑141 (MQ=255) gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAAGTGTGTTTATGTTCAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTAt > 1:666234/1‑150 (MQ=255) gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGGGTTTTTGTTCCATTTTGCAGTCA‑GCCGCGAAAGCCTGTTAt > 2:315956/1‑150 (MQ=255) gggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCT‑CCGGGTAAGGTGGGTTTTTGTTCTCTTTTGCAGTCA‑GCCGCGAAAGCCTGTTTTCAgggt > 1:435458/1‑149 (MQ=255) gggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTTAATTTTGTAGTCA‑GCCGCGCAAGCCTGTTATCAGGAt > 1:55637/1‑151 (MQ=255) gggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGGGTGTTTATGTTTCATTTTTCAGTCA‑GCCGCGAAAGCCTGTTTTCAgggt > 2:67653/1‑149 (MQ=255) gggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGTGTTTTTGTTTAATTTTTCAGTCA‑GGCCCGCAAGGCCGTTATCAGGAt > 1:705916/1‑151 (MQ=255) gggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGTGGTTTTGTTTAATTTTTCAGTTA‑GCCGCGGAAGCCCGTTAACAgggt > 2:1186137/1‑149 (MQ=255) ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAgg < 2:1080752/148‑1 (MQ=255) tCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAg < 2:355654/151‑1 (MQ=255) cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGt < 2:1330692/151‑1 (MQ=255) cTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTgg < 2:949444/151‑1 (MQ=255) ccGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCt < 2:1476070/150‑1 (MQ=255) ggTCAATTTATCCTTAAACATCCGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCAGACAGTCT‑CCCTGTAACGTGTGTTTGTTATGCATTTTTCATTCACGCCG‑AACAGCTGGTTATCAGGGTCTCACTGGCTTTTTTTTCtttt > 1:958265/1‑151 (MQ=255) ggTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGATTTTCCCGGTTAAGG‑GTGGTTATGTTTAAATTTTCAGTAA‑GCCGCGCAAACCCGGTATCAGGGTTTCAGGGGtttttttttttttt > 1:1292223/1‑151 (MQ=255) ggTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTT‑CCGGGTAAGGGGGGTTTTTGTTCAATTTTTCAGTCA‑GCCCCGGAAGACCGTTTTTAGGATTTTCGTGGtttttttttttttt > 2:480144/1‑151 (MQ=255) ggTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGGGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTTTCAGGGTTTTAGTGGGTtttttttttttt > 2:189299/1‑151 (MQ=255) ggTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGGGTGGTTTTGTTCAATTTTTCAGTCA‑GCCCCGAAAGCCTGTTTTTAGGATTTCAGTGGGTtttttttttttt > 2:1507152/1‑151 (MQ=255) ggTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGGGGGTTTATTTTTAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGGGGGTtttttttttttt > 2:1090615/1‑151 (MQ=255) gTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTAttt < 2:919038/149‑1 (MQ=255) cAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGGGTTTTTGTTTAATTTTTCAGGCA‑GCCGCGAAAGCCCGTTATTAGGATTTCAGTGGGTTTTTTTTTTTTTTTg > 2:436762/1‑151 (MQ=255) aTTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTTAGGGGGGTTTTTGTTCAATTTTTCCGTCA‑GCCCCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTTTTTATTTTTTGCa > 2:1502640/1‑151 (MQ=255) aTTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCAATTT‑TCGGTTAAGGGGTGTTTTTGTTTTAATTTGTCGTCA‑GCCGCGGAAGCCTGTTATCAGGATTTTAGGGGTTTTTTTTTTTTTTTTGCa > 1:879871/1‑151 (MQ=255) ccTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGATTCT‑TCGGTTAAGGGGGGGTTATGGTCAATTTTGCTGTCG‑CCCCCGAAAGCCTGTTGTTAGGATTTCCGCGGTTTTTCTTTATTTTCTGCaaacccg > 1:1067596/1‑146 (MQ=255) ccTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACgg < 1:1122473/151‑1 (MQ=255) ccTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGGGTTTTTGTTCCATTTTGCAGTCC‑GCCGCGGAAGCCCGTTTTCAGGGTTTTAGTGGTTTTTCTTTTTTTTTTTCAAAACgg > 1:603535/1‑151 (MQ=255) aaCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTTAGGGGGGTTTATGTTCAATTTTGCAGTCA‑GCCCCGAAAGCCTGTTTTCAGGATTTTAGGGGTTTTTTTTTTTTTTTTTCAACACGGGtgtg > 2:1151191/1‑151 (MQ=255) aCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTgg < 1:809536/151‑1 (MQ=255) aCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTgg < 2:1363844/151‑1 (MQ=255) aCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGTGTTTTTGTTCAATTTTTCAGGCA‑GCCGCGAAAGCCTGTTTTTAGGATTTTAGTGGGTTTTTTTTTTTTTTTTCAACACGGGTGTgg > 2:787709/1‑151 (MQ=255) cATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTT‑CCGGTTAAGGTGTGTTTATGTTTAATTTTTCAGTCA‑GCCGCGCAAGCCTGTTATCAGGATTTCAGGGGTTTTTCTTTTTTTTTTTCAACACGGTTGTGGt > 2:1390695/1‑151 (MQ=255) cATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGt < 1:395337/151‑1 (MQ=255) aTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGtt < 2:807102/151‑1 (MQ=255) aTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGtt < 2:138386/151‑1 (MQ=255) aTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGtt < 2:1195631/151‑1 (MQ=255) aTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGtt < 1:182856/151‑1 (MQ=255) tCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTtc < 1:953388/151‑1 (MQ=255) cagcagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTTAGGGGTGTTTTTGTTTAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTATCAGGGTTTCAGTGGTTTTTCTTTATTTTTTTCAACACGGGTGTGGTtc > 1:308525/1‑150 (MQ=255) gcagTAATTTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGGGGGTTTTTGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTTTCAGGGTTTCTGTGGTTTTTTTTTTTTTTTTTCCACACGGTTGTGGGtcct > 2:1297149/1‑150 (MQ=255) gcagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTTT‑CCGGTTTAGGGGTGGTTTTGTTCAATTTTTTCGTCA‑GCCGCGAAAGCCTGTTATCAGGGTTTTAGGGGTTTTTTTTTTTTTTTTTCAACACGGTTGTGGGtcct > 2:1068201/1‑150 (MQ=255) gcagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCT‑CCGGGTTAGGTGTGGTTATGTTCAATTTTTCAGGCA‑GCCGCGAAAGCCCGTTATCAGGGTTTCTGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTttct > 1:1470496/1‑150 (MQ=255) gcagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTT‑CCCGTTATGGGGGGGTTTTGTTCAATTTTGCAGGCA‑GGCCCCGAAGGCTGTTATCCGGATTTTTGTGGGTTTTCTTTTTTTTTTTCCACACGGTTTTGGGtccc > 1:1297357/1‑149 (MQ=255) gcagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑TCGGGTAAGGGGTGGTTATGTTCAATTTTGCCGTCC‑GCCGCGAAAGCCTGTTATCAGGGGTTTAGTGGGTTTTCTTTTTTTTTTGTAACACGGGTGTGGTtcct > 1:1396913/1‑150 (MQ=255) gcagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGGGTTTATGTTCAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCTGTGGGTTTTCTTTTTTTTTTTCAACACGGTTTTGGGtcct > 2:1418743/1‑150 (MQ=255) aaTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGATTTC‑CCGGGTAAGGGGGGGTTATTTTCAATTTTGCAGTCA‑GCCGGGAAAACCTGTTATCAGGATTTTAGTGGGTTTTTTTTTTTTTTTGCAACACGGTTGTGGTTCCTCCTACg > 2:505850/1‑151 (MQ=255) aaTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTT‑CCGGTTTAGGGGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTTTCAGGATTTCAGTGGGTTTTTTTTTTTTTTTTCAACACGGGTGTGGGTCCTCCTACg > 2:1451561/1‑151 (MQ=255) aaTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGGGTGTTTATGTTCAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGGTTTTTTTTTTTTTTTTCAACACGGTTGTGGGTTCTCCTACg > 2:342433/1‑151 (MQ=255) aaTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGTGTTTATGTTCAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTATCAGGGTTTTAGTGGGTTTTTTTTTTTTTTTGCAACACGGTTGTGGGTCCTCCTACg > 2:1487105/1‑151 (MQ=255) aTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGc < 1:1053661/151‑1 (MQ=255) aTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGc < 1:749336/151‑1 (MQ=255) aTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTGTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGc < 1:1390005/151‑1 (MQ=255) tCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTT‑CCGGTTTAGGGGTGTTTTTTTTCAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTTTCAGGGTTTCAGTGGTTTTTTTTTTTTTTTTTCAACACGGTTGTGGTTTCTCCTACg > 2:631243/1‑149 (MQ=255) ccccTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGGGTTTATGTTCCATTTTTCAGGCA‑GCCGCCAAAGCCTGTTCTTAGGGTTTTCGGGGTTTTTCTTTTTTTTTTGCAACACGGGTGTGGGTCCTCCTTCCCTACttt > 1:12427/1‑151 (MQ=255) ccccTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGGTAAGGGGTGTTTTTGTTCAATTTTTCAGTCA‑GCCGCGAAAGCCTGTTTTCAGGGTTTCAGTGGTTTTTTTTTTTTTTTTTCAACCCGGGTGTGGTTCCTCCTACGCTACttt > 2:672431/1‑151 (MQ=255) cccTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTc < 2:419839/151‑1 (MQ=255) tGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGc < 1:85844/151‑1 (MQ=255) gCAATGCCCGTCCTTGCGGCGGGCCTTCT‑CCGGGTAAGGGGGGTTTTTGTTTAATTTTGCAGGCA‑GCCCCGAAAACCTCTTTTTCGGGTTTTCGTGGTTTTTTTTTCTTTTTTGCCACACGGTTGTTGTTCCTCCTTCGCttctttctt > 1:1437107/1‑148 (MQ=255) gCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGGGTGTTTATGTTCCATTTTGCAGTCA‑GCCGCGAAAGCCTGTTTTCAGGGTTTTAGTGGTTTTTCTTTTTTTTTTTCAACACGGTTGTGGTTCCTCCTCCGCTCCTTTCTg > 2:748779/1‑149 (MQ=255) tCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGc < 1:1389965/151‑1 (MQ=255) cggGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGt < 2:254776/150‑1 (MQ=255) cgcgCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTACAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGt < 1:384738/147‑1 (MQ=255) gCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc < 1:824647/150‑1 (MQ=255) gTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACg > 1:95924/1‑149 (MQ=255) gTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGc < 2:459148/150‑1 (MQ=255) ttAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCt < 2:1005807/150‑1 (MQ=255) ttAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCt < 1:525683/150‑1 (MQ=255) aGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACg > 2:247733/1‑151 (MQ=255) | TATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCT‑CCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCA‑GCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACG > NC_000913/540409‑540705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |