Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,356,201	0	T	G	48.6%	99.2 / 20.2	73	T304P (ACC→CCC)	sapA	antimicrobial peptide transport ABC transporter periplasmic binding protein
Reads supporting (aligned to +/- strand):  ref base T (4/33);  new base G (35/0);  total (40/33)
Fisher's exact test for biased strand distribution p-value = 1.93e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCC  >  NC_000913/1356058‑1356351                                                                                                                                                 |                                                                                                                                                              gTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGGGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGGGGG‑GTTtaaa                                                                                                                                                       >  2:1161465/1‑150 (MQ=255)  tCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGAGGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAAt                                                                                                                                                       <  2:1673791/150‑1 (MQ=255)   cATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGc                                                                                                                                                     <  1:1300782/151‑1 (MQ=255)   cATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGc                                                                                                                                                     <  2:380582/151‑1 (MQ=255)   cATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGc                                                                                                                                                     <  2:699497/151‑1 (MQ=255)           cACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGGGGGG‑GTTAAAT‑CCAGAGAgg                                                                                                                                             >  2:1608029/1‑151 (MQ=255)             cGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCg                                                                                                                                           <  2:531637/151‑1 (MQ=255)                      cgGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGGGGG‑GTTTAAAGCCCGATAGGGGGCGCTCAt                                                                                                                                   >  2:1420127/1‑150 (MQ=255)                        gTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GTTTAATGTCAAAAAgggggagtttcttc                                                                                                                                 >  1:633271/1‑138 (MQ=255)                        gTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GGTTAATGGCAGAGAGGCGAAGGTTATcc                                                                                                                                 >  1:809093/1‑150 (MQ=255)                        gTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGGGGG‑GGTTAATACCAGATAGGGGGCGGTCATcc                                                                                                                                 >  1:369382/1‑150 (MQ=255)                        gTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATcc                                                                                                                                 <  1:998540/150‑1 (MQ=255)                        gTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GGTTAATGCCAGAAAAGGGACGGtcctcc                                                                                                                                 >  2:1160719/1‑150 (MQ=255)                        gTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑GTTTGCGGG‑GTTTAATTCCAGATAGGCGGCGTTCATcc                                                                                                                                 >  2:1727290/1‑150 (MQ=255)                        gTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑ATTTGGGGG‑GTTAAAAGCCAGAAAGGGGGCGTTAAttc                                                                                                                                 >  2:1380158/1‑148 (MQ=255)                         tAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATccc                                                                                                                                <  1:908431/150‑1 (MQ=255)                          aaaaTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GTTTAAAGCCCGATAAGGGGCGGTCATccccg                                                                                                                              >  2:338215/1‑149 (MQ=255)                             aTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GGTTAATGGCAGAAAAGGGACGTTTATCCCCgggg                                                                                                                           >  1:1650438/1‑149 (MQ=255)                             aTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGAc                                                                                                                           <  2:1088357/151‑1 (MQ=255)                             aTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGAc                                                                                                                           <  1:626261/151‑1 (MQ=255)                             aTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGAc                                                                                                                           <  1:1010815/151‑1 (MQ=255)                             aTAAAGGCCGCCGTTTCAGACGTACCAGAATAGATGGATTGCATCAGGCGCTGGTTATTAAGCGCCAGTGCAAGCCCATGCCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GCTAAATGCCAGCAAGGCGAAGTTCAGCCCAAGAc                                                                                                                           <  1:870675/151‑1 (MQ=255)                                       ccgTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCCGC‑GTGTAATGCCAGATAGGGGACCTTTATTCCACGgcgccccgctca                                                                                                                 >  1:271700/1‑143 (MQ=255)                                          tttCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAAc                                                                                                            <  2:1715579/150‑1 (MQ=255)                                          tttCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAAc                                                                                                            <  1:1495636/150‑1 (MQ=255)                                          tttCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACg                                                                                                           <  1:1658050/151‑1 (MQ=255)                                               gCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GGTTAATGCCAGGTAGGCGGCGGTTAACCCCGGACGccacggttaaagccaa                                                                                                          >  2:1488186/1‑135 (MQ=255)                                                  gTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGGGGG‑GGTGAAAGCCCCAAATGCGGCGCTTATCCCAGGATGCGG‑T‑G‑TTAAACG‑CAAAcgcg                                                                                                  >  1:584047/1‑151 (MQ=255)                                                   tACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGGGGG‑GTTTAATGCCCGATAGGCGGCGGTTATCCCAAGAACCAG‑CGG‑TTaaaacaaaagcgg                                                                                                   >  1:1624627/1‑141 (MQ=255)                                                   tACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GGTTAAAGCCAGATAAGGGGCGGTTATCCCCGGGAGCCG‑C‑G‑GTAAAAG‑CAAACGCgg                                                                                                 >  1:1544021/1‑151 (MQ=255)                                                   tACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGGGGG‑GTTAAATGCCAGAAAGGCGACGTTCATCCCCGGACGCAG‑C‑G‑GTAAAAG‑CAAACGCgg                                                                                                 >  2:1675491/1‑151 (MQ=255)                                                     ccATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GGTAAATGCCAAAAAGGGGGAGTTCATCCCAGGACGCAG‑C‑G‑GTTAAAG‑CAAAAGCgggg                                                                                               >  2:422410/1‑150 (MQ=255)                                                       ataataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GTTTAATGCCAGATAAGGGACGGTTATCCCCGGGCGCCG‑C‑G‑GTAAAAG‑CAAACGCGGggcg                                                                                             >  1:1358930/1‑151 (MQ=255)                                                       ataataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GTTTAAAGGCAAATAGGGGACGTTCATCCCCCGGCGCAG‑C‑GATTAACCA‑CAAG‑GCgggggg                                                                                             >  2:513896/1‑148 (MQ=255)                                                       ataataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GTTTAATGCCCCATAGGGGACGTTCTTCCCCTGACCCCG‑C‑G‑GTTAAAG‑CCAACGCGGggcg                                                                                             >  2:1358262/1‑151 (MQ=255)                                                        taataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGGGGG‑GTTTAATGCCAGATAGGGGGCGGTCCTCCCCGGACGCAG‑G‑G‑GTTAAAG‑CAAACGCGGggcgg                                                                                            >  2:310577/1‑150 (MQ=255)                                                           taGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GGTTAATGCCAGAGAAGCGACGTTCATCCCCGGGCGCAGCC‑G‑TTAAA‑G‑CAAACGCcgggtggca                                                                                          >  1:1341130/1‑144 (MQ=255)                                                                ggATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GTTTAAAGTCAGAAAAGGGAGGTTTATCCCACGACACAG‑C‑G‑TTCAAAA‑CAAAGGCGGGGCGTCAAGC‑aaa                                                                                   >  2:551985/1‑151 (MQ=255)                                                                     gCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑GTTGGCGGG‑GTTTAAAGCCCGAAAAGGGGCGGTCCTCCCCGGACTCAA‑C‑G‑GTTAAAG‑CAAACGCCGGGCGTCCCGC‑aaaaaaga                                                                              >  1:861101/1‑147 (MQ=255)                                                                           ggCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GTTTAATGCCCGATAGGCGGCGTTCATCCCAGGACGCAG‑C‑G‑GTAAACG‑CAAACGCGGGTCGGCACGC‑CAAATgggaag                                                                           >  1:1409670/1‑144 (MQ=255)                                                                            gcgcTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTTGTCACGC‑AAAATGGATAgc                                                                          <  2:409673/148‑1 (MQ=255)                                                                            gcgcTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAgc                                                                          <  1:301416/148‑1 (MQ=255)                                                                               cTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GGTAAAAGCCACAAAGGGGACGGTCATCCCCAGCCGCAG‑C‑G‑GTAAAAG‑CAAACGCGGGGCGGCCCGC‑caaaaagaaagccgg                                                                       >  1:1231609/1‑137 (MQ=255)                                                                               cTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GTTAAATGCCCCAAAAGGGACGCTCATCCCCCGACGCAC‑C‑G‑TTTAAAG‑CAAACGCGGGTCGTCCCGC‑AAAAAGGGTAactgg                                                                       >  1:1699250/1‑148 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGT‑GTTTAATGCCAGAAAGGGGACGTTCATCCCAGGACGCCG‑C‑G‑GTAAAAG‑CAAGCGCGGGGCGGCACCC‑AAAAAGGGAAGctggctggg                                                                  >  2:1255180/1‑150 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGT‑GTTAAATGACCGAAAGGGGGCGGTTTTCCCAGGAAGCAG‑C‑G‑TTAAAAA‑CAAACAGGGGGGGGCACCC‑AAAAAGGAAAgcacggcggg                                                                  >  2:1495638/1‑143 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGG‑GTTAAAAGCCCGAAAAGGGGCGTTCATCCCCGGACGCAG‑C‑G‑TTAAAAG‑CAAACGCGGGGCGGCACGC‑AAAAAGGAAAGctggctggg                                                                  >  2:1213220/1‑150 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGGGGG‑GTTTAATGCCCGATAGGCGGCCTTTCTCCCCCGACGCCG‑C‑G‑TTTAAAG‑CCAACGCGGGGGGGCACCC‑AAAAATGGTAGctgggtgg                                                                   >  2:1589394/1‑150 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GTTAAAAGCCAGATAGGCGACGTTCATCCCCGGACGCCG‑C‑G‑GTTAAAG‑CAAGCGCGGGGCGTCACGC‑AAAAAGGGTAGctggctggg                                                                  >  2:760926/1‑150 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GTTAAAAGCCAGATAGGCGACGTTCATCCCAGGGCGCAG‑C‑G‑GTAAACG‑CAAACGCGGGGCGGCACCC‑CAAAAGGATAGctggctgg                                                                   >  2:1175704/1‑150 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GTGTTAAGCCAGCTAGGCGACCGTTATCCCACGACGGCG‑C‑G‑TCAAATT‑ACACCCCGGGCCCTGCCGC‑AAAAATGATAgctgggggg                                                                   >  1:1421884/1‑146 (MQ=255)                                                                                 ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GGTAAATTCCCGAAAGGCGACGTTTATCCCCGGACCCCG‑C‑G‑TTTAAAG‑CAAGCGCGGGTCGTCACGC‑CAAAAGGGTAAccgggtggg                                                                  >  1:1663972/1‑150 (MQ=255)                                                                                      ttaATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGG‑GTTAAAAGCCAGATAGGCGGCGGTCATCCCCGGACGCAG‑C‑G‑TTAAAAC‑CAAGCGCGGGGCGTCACCC‑CAAAAGGGTAACCGGCGGGgagcag                                                             >  2:483992/1‑151 (MQ=255)                                                                                        aaTCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGcaggc                                                           <  2:1444754/151‑1 (MQ=255)                                                                                                gTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGT‑GGTTAATTCCAAATAGGCGGCCTTCATCCCAGGACGCAG‑C‑G‑GTTAACGCCAAGC‑CGGGGCGCCCCCC‑CAAATGGGTAACTCGCCTGCCGCaggccaggcccg                                                   >  2:138812/1‑149 (MQ=255)                                                                                                 tGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCaggccaggcc                                                     <  2:489024/148‑1 (MQ=255)                                                                                                 tGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCaggccaggcc                                                     <  2:793/148‑1 (MQ=255)                                                                                                 tGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCaggccaggcc                                                     <  2:797196/148‑1 (MQ=255)                                                                                                 tGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCaggccaggcc                                                     <  1:1510306/148‑1 (MQ=255)                                                                                                 tGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCaggccaggcc                                                     <  1:1716926/148‑1 (MQ=255)                                                                                                 ggCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TGTGGCGGT‑GTTAAATGCCAGATAGGCAACGTTCACCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCaggccaggcc                                                     <  1:294661/147‑1 (MQ=255)                                                                                                   ccAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAAc                                                <  1:1651533/151‑1 (MQ=255)                                                                                                   ccAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAAc                                                <  1:533246/151‑1 (MQ=255)                                                                                                   ccAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAAc                                                <  1:310480/151‑1 (MQ=255)                                                                                                   ccAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCGGGCTGGCAGCAGGCCAGGCCAGAAc                                                <  2:450797/151‑1 (MQ=255)                                                                                                            ggCGGACAGCGGGATTATTTAGCGGCGG‑TTTTGCGGTGGTAAAAGGCCGGAAAGGGAAGGTTCTTCCCAGGCGGCGG‑G‑G‑TTTAA‑G‑CAAAGGCGGGGGGCTAAGCAAAAATGGATGGGTGGC‑GGGAGCAGACCCCGCCAGAACGgcgccatt                                       >  1:1310814/1‑147 (MQ=255)                                                                                                                     cGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCa                              <  2:1578583/150‑1 (MQ=255)                                                                                                                     cGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGAA‑TTCCCCGGTc                               <  2:14496/149‑1 (MQ=255)                                                                                                                        gATTATTTAGCGGCGG‑TTTGGCGGG‑GTTAAATGCCAGAAAGGCGACGTTTATCCCCGGGCGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGGCGCCACGC‑AAAATGGATAGCTGGCGGGGAGCAGGCCAGGCCAGAAAGCCCCATTTCCCCggccgggg                           >  2:83208/1‑145 (MQ=255)                                                                                                                              ttAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCAGGAGTTTCGa                    <  2:1525186/151‑1 (MQ=255)                                                                                                                               tAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCAGGAGTTTCGAc                   <  1:1479974/151‑1 (MQ=255)                                                                                                                                     cgg‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCAGGAGTTTCGACAGACg              <  1:1658339/150‑1 (MQ=255)                                                                                                                                     cgg‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCAGGAGTTTCGACAGACg              <  2:90415/150‑1 (MQ=255)                                                                                                                                                 t‑gtTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGAGAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTgccgcc  <  1:1260288/151‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                              GTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGG‑TTTGGCGGT‑GTTAAATGCCAGATAGGCGACGTTCATCCCAGGACGCAG‑C‑G‑TTAAACG‑CAAGCGCGGGTCGTCACGC‑AAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCA‑TTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCC  >  NC_000913/1356058‑1356351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑