| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,950,559 | (C)5→6 | intergenic (‑37/‑273) | aspS ← / → yecD | aspartyl‑tRNA synthetase/isochorismatase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,950,554 | 1 | . | C | 97.9% | 338.9 / ‑1.2 | 97 | intergenic (‑32/‑278) | aspS/yecD | aspartyl‑tRNA synthetase/isochorismatase family protein |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (48/47); total (49/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 104 total aligned reads displayed.
ATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAC > NC_000913/1950422‑1950683 | aTCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑cccccc > 2:683161/1‑138 (MQ=255)aTCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑cccccc < 2:688164/139‑2 (MQ=255) cAGGCTACCAAGATCACGACGACGGTTGACCCAATCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCGATACGCATGAGATATCCCTTAACTTAGCTGCTGGCGTAATC‑CCCCctg > 1:2044530/1‑139 (MQ=255) gCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCctgctg > 1:1241857/1‑139 (MQ=255) tACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTgcg < 1:1881585/139‑1 (MQ=255) aCCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTgcgc > 2:1728700/1‑139 (MQ=255) tCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGAc > 1:1355818/1‑139 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAg > 1:968066/1‑139 (MQ=255) cgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTc < 1:1728700/139‑1 (MQ=255) gTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGc > 1:1697250/1‑139 (MQ=255) tGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt < 2:1697250/139‑1 (MQ=255) gACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGTTGCGCAGGTGACCAAGTc < 1:647494/131‑1 (MQ=255) gACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGTTGCGCAGGTGACCAAGTc > 2:647494/1‑131 (MQ=255) aCCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTa < 2:567549/139‑1 (MQ=255) cacaGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTgcg > 1:982711/1‑107 (MQ=255) cacaGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTgcg < 2:982711/107‑1 (MQ=255) agTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg > 2:182534/1‑129 (MQ=255) agTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 1:182534/129‑1 (MQ=255) agTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACaa < 2:1241857/139‑1 (MQ=255) agTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACaa > 2:1452778/1‑139 (MQ=255) cACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGc < 1:1429180/115‑1 (MQ=255) cACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGc > 2:1429180/1‑115 (MQ=255) ccTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑ccc > 1:2051257/1‑87 (MQ=255) ccTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑ccc < 2:2051257/87‑1 (MQ=255) gctgcCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCctgctg > 1:530820/1‑92 (MQ=255) gctgcCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCctgctg < 2:530820/92‑1 (MQ=255) tgcCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGTCCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGaaa > 2:1045133/1‑139 (MQ=255) ccccACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑ccc < 2:940861/80‑1 (MQ=255) ccccACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑ccc > 1:940861/1‑80 (MQ=255) ccACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAg > 2:650868/1‑139 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 1:683161/139‑1 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:968066/139‑1 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:1355818/139‑1 (MQ=255) cGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGc < 2:1576137/101‑1 (MQ=255) cGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGc > 1:1576137/1‑101 (MQ=255) gCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCg > 2:1103721/1‑85 (MQ=255) gCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCg < 1:1103721/85‑1 (MQ=255) tCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:1480123/119‑1 (MQ=255) tCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 1:1480123/1‑119 (MQ=255) ccACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATG‑AAAAAGGCGGCTATTATACTGGAAATTCTg > 1:7663/1‑139 (MQ=255) acaATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGACACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGc < 1:1452778/139‑1 (MQ=255) tatTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGTCCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCa < 1:1045133/139‑1 (MQ=255) tatTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 1:462257/1‑112 (MQ=255) tatTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:462257/112‑1 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 1:573849/83‑1 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg > 2:573849/1‑83 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTACGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCg > 2:1845083/1‑139 (MQ=255) tGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 1:744981/1‑107 (MQ=255) tGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:744981/107‑1 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCctgctg > 1:947121/1‑49 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCctgctg < 2:947121/49‑1 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt > 2:1273812/1‑72 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt < 1:1273812/72‑1 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCta > 2:324753/1‑109 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCta < 1:324753/109‑1 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAaga > 2:181429/1‑139 (MQ=255) gCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGt > 2:500545/1‑54 (MQ=255) gCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGt < 1:500545/54‑1 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 2:1021025/1‑132 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa < 1:1021025/132‑1 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCt > 2:1185624/1‑139 (MQ=255) atCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCtat < 2:951586/99‑1 (MQ=255) atCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCtat > 1:951586/1‑99 (MQ=255) tCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg > 2:1654615/1‑66 (MQ=255) tCCCTTAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 1:1654615/66‑1 (MQ=255) ccTTAACTTAGCTGCCGGCG‑GATG‑CCCGCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCCGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCATGGCCCGCGCTg > 1:1229086/1‑139 (MQ=255) ttAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAg < 2:1455861/86‑1 (MQ=255) ttAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAg > 1:1455861/1‑86 (MQ=255) tAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg > 2:64487/1‑61 (MQ=255) tAACTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 1:64487/61‑1 (MQ=255) aaCTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:1187214/86‑1 (MQ=255) aaCTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGc > 2:99647/1‑128 (MQ=255) aaCTTAGCTGCCGGCG‑GATGCCCCCCTGCCGCGCAGGTGACCAAGCCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 1:1187214/1‑86 (MQ=255) aCTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGc > 1:461302/1‑48 (MQ=38) aCTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGc < 2:461302/48‑1 (MQ=38) aCTTAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAATCACAGCCTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCGGGAAc < 1:384688/139‑1 (MQ=255) tAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCg < 1:1755640/49‑1 (MQ=38) tAGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCg > 2:1755640/1‑49 (MQ=38) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTc < 1:655517/42‑1 (MQ=37) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTc > 2:655517/1‑42 (MQ=37) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 1:461076/52‑1 (MQ=38) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg > 2:461076/1‑52 (MQ=38) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTa < 2:1050776/57‑1 (MQ=39) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTa > 1:1050776/1‑57 (MQ=39) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggcgg < 2:2040844/83‑1 (MQ=255) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggcgg > 1:2040844/1‑83 (MQ=255) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:1563808/1‑113 (MQ=255) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa < 2:1563808/113‑1 (MQ=255) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCt > 2:1498609/1‑139 (MQ=255) aGCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCt > 2:55917/1‑139 (MQ=255) gCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTc < 1:768979/41‑1 (MQ=37) gCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTc > 2:768979/1‑41 (MQ=37) gCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt < 1:1509812/48‑1 (MQ=38) gCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt > 2:1509812/1‑48 (MQ=38) gCTGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTc > 1:370437/1‑139 (MQ=255) tGCCGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATG‑AAAAAGGCGGCTATTATACTGGAAATTCTGCCG‑‑CCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAc < 2:7663/139‑1 (MQ=255) ccGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 1:1498609/139‑1 (MQ=255) ccGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa > 1:145112/1‑139 (MQ=255) ccGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 1:55917/139‑1 (MQ=255) ccGGCG‑GATGCCCCCCTGCTGCGCAGGTGACCAAGACGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 1:1455044/139‑1 (MQ=255) | ATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCG‑GATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAC > NC_000913/1950422‑1950683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |