| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,484,897 | (C)6→7 | coding (524/3594 nt) | evgS → | hybrid sensory histidine kinase in two‑component regulatory system with EvgA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,484,891 | 1 | . | C | 97.9% | 328.6 / ‑0.9 | 96 | coding (518/3594 nt) | evgS | hybrid sensory histidine kinase in two‑component regulatory system with EvgA |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base C (48/46); total (48/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.27e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
CTTCGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑CCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAG > NC_000913/2484753‑2485023 | cTTCGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTa < 1:258689/139‑1 (MQ=255) ccgccTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑c > 2:439476/1‑139 (MQ=255) taatGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGt < 2:890576/139‑1 (MQ=255) taatGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGt < 2:351612/139‑1 (MQ=255) tGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAAt > 1:1180032/1‑139 (MQ=255) cATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATtca > 2:1058299/1‑139 (MQ=255) cATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑c < 2:764212/122‑1 (MQ=255) cATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑c > 1:764212/1‑122 (MQ=255) ctgcAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTaa < 1:1035659/130‑1 (MQ=255) ctgcAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTaa > 2:1035659/1‑130 (MQ=255) tgcAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑CCCC‑CCAGACGAGGTAATTCatcaatca < 2:1136380/139‑1 (MQ=255) cAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCAt > 1:385379/1‑139 (MQ=255) aaaccaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCa < 2:1247316/139‑1 (MQ=255) accaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTaa > 2:421011/1‑120 (MQ=255) accaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑cccaga > 1:1005584/1‑108 (MQ=255) accaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑ccc > 1:1331642/1‑108 (MQ=255) caTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAg < 2:862918/139‑1 (MQ=255) ttACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCGCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTa > 1:1474457/1‑139 (MQ=255) tACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGc < 1:1434353/130‑1 (MQ=255) tACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGc > 2:1434353/1‑130 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTaa < 2:1629580/103‑1 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTaa > 1:1629580/1‑103 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCtt > 2:90968/1‑139 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑c < 2:1863529/86‑1 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑c > 1:1863529/1‑86 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTa < 1:303873/84‑1 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTa > 2:303873/1‑84 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCttt > 2:130356/1‑139 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑cccaga < 2:1468520/94‑5 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑cccaga < 2:1523010/94‑5 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑cccaga > 1:1523010/1‑90 (MQ=255) ccGGCGCTGGTAACCACCCTTCACGACTGAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCCCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCtttt > 2:1275776/1‑139 (MQ=255) gTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGc > 1:1720136/1‑114 (MQ=255) gTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGc < 2:1720136/114‑1 (MQ=255) accaccCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTatat < 1:2007943/139‑1 (MQ=255) caccCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCa < 2:1077462/139‑1 (MQ=255) ttCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCAt < 1:90968/139‑1 (MQ=255) ttCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCAt > 1:147820/1‑139 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCaaa < 1:240472/91‑1 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCaaa > 2:240472/1‑91 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGt < 1:1275776/139‑1 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGt > 1:154663/1‑139 (MQ=255) aTGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGtc > 1:1293646/1‑139 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTa < 2:1411121/52‑1 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTa > 1:1411121/1‑52 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGtct > 1:391052/1‑139 (MQ=255) gACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAg < 1:1481297/139‑1 (MQ=255) ccGCCTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCt < 2:1400388/139‑1 (MQ=255) cTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCt < 1:665212/136‑1 (MQ=255) cTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCt > 2:665212/1‑136 (MQ=255) cTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTAATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAACTggg < 1:130356/139‑1 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCAt > 2:234049/1‑117 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCAt < 1:234049/117‑1 (MQ=255) aCCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGcac < 2:391052/139‑1 (MQ=255) ccTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGcaca > 1:709583/1‑139 (MQ=255) ccTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGACGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGcaca < 1:1058299/139‑1 (MQ=255) cACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATg < 2:1474457/139‑1 (MQ=255) cACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATg > 1:1907893/1‑139 (MQ=255) cACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cccc‑cccaga > 2:1212974/1‑43 (MQ=255) aCCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGa > 1:1386409/1‑139 (MQ=255) aCCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGa > 2:1099024/1‑139 (MQ=255) aCCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGa > 1:911807/1‑139 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa > 2:1569443/1‑92 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt < 2:1386409/139‑1 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt < 1:439476/139‑1 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt < 1:636995/139‑1 (MQ=255) cAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCACCAATCATTTCCAAAAGCAACAATTATCTCTTTTa > 2:1934178/1‑91 (MQ=255) cAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCACCAATCATTTCCAAAAGCAACAATGATCTCTTTTa < 1:1934178/91‑1 (MQ=255) cAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑c < 2:815694/35‑1 (MQ=255) cAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑c > 1:815694/1‑35 (MQ=255) ccAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGtct < 2:438408/116‑1 (MQ=255) ccAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGtct > 1:438408/1‑116 (MQ=255) cAGTAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTa < 2:147820/139‑1 (MQ=255) tAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa > 1:344726/1‑105 (MQ=255) tAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 2:344726/105‑1 (MQ=255) tAAATATTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTg > 2:1536526/1‑139 (MQ=255) tatTGCTCGGGTAGCAAATTA‑CCCCGCCAGACGAGGTAATTCATCAATCAGTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGgtag < 1:1536526/139‑1 (MQ=255) atTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTaa < 2:1399754/38‑1 (MQ=255) atTGCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGgtagt < 2:1293646/139‑1 (MQ=255) gCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGc > 1:1789827/1‑113 (MQ=255) gCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGc < 2:1789827/113‑1 (MQ=255) gCTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAc > 1:1434418/1‑139 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa > 1:168584/1‑73 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAgg > 1:1142159/1‑88 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAgg < 2:554696/88‑1 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAgg > 1:554696/1‑88 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAgg < 2:1142159/88‑1 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCAt < 1:143083/91‑1 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGTTAGTAAct > 2:1476601/1‑138 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAca > 2:1980562/1‑139 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAca < 2:188459/139‑1 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAca < 2:154663/139‑1 (MQ=255) cTCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAca > 1:1115078/1‑139 (MQ=255) tCGGGTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAcat > 2:1265424/1‑139 (MQ=255) gTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa < 1:1435834/68‑1 (MQ=255) gTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa > 2:1435834/1‑68 (MQ=255) gTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTgg < 2:1384686/126‑1 (MQ=255) gTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTgg > 1:1384686/1‑126 (MQ=255) gTAGCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGgtagta > 1:954881/1‑131 (MQ=255) gCAAATTACCCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTAcc < 1:1980562/139‑1 (MQ=255) | CTTCGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑CCCC‑CCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAG > NC_000913/2484753‑2485023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |