Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,728,1101.C40.2% 38.4 / 187.5 102coding (1262/1455 nt)xylBxylulokinase
Reads supporting (aligned to +/- strand):  ref base . (29/32);  new base C (21/20);  total (50/52)
Fisher's exact test for biased strand distribution p-value = 8.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.00e-02
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

GCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGTTTAATACCGCAGGCATGCACGACATCCATGC  >  NC_000913/3727973‑3728245
                                                                                                                                           |                                                                                                                                        
gCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑c                                                                                                                                         >  1:1946985/1‑139 (MQ=255)
   gATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑cccc                                                                                                                                      <  1:1267620/139‑1 (MQ=255)
        gCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCg                                                                                                                                <  1:89303/139‑1 (MQ=255)
          ggCATAACGCTGCGCATCTGGTAGATGCCACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTa                                                                                                                              <  1:822277/139‑1 (MQ=255)
           gCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑cccccc‑cccgta                                                                                                                             <  1:115445/139‑5 (MQ=255)
           gCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑cccccc‑cccgta                                                                                                                             <  1:646784/139‑5 (MQ=255)
           gCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTAc                                                                                                                             <  1:1028254/139‑1 (MQ=255)
            cATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑cccccc‑cccgtac                                                                                                                            <  1:1497495/139‑6 (MQ=255)
                     gcgcATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAg                                                                                                                   <  1:1082435/139‑1 (MQ=255)
                      cgcATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGT‑ATCGAgct                                                                                                                 >  2:304523/1‑139 (MQ=255)
                           cTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGctgctg                                                                                                             <  2:1312149/139‑1 (MQ=255)
                           cTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGctgctg                                                                                                             >  2:1578056/1‑139 (MQ=255)
                            tGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGctgctg                                                                                                             >  2:208328/1‑139 (MQ=255)
                                   tGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTg                                                                                                      >  1:1513759/1‑139 (MQ=255)
                                     cGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGAc                                                                                                           <  1:887974/131‑1 (MQ=255)
                                     cGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGAc                                                                                                           >  2:887974/1‑131 (MQ=255)
                                     cGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGata                                                                                                   >  2:706691/1‑139 (MQ=255)
                                      gACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCg                                                                                                                                <  1:1757960/109‑1 (MQ=255)
                                      gACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCg                                                                                                                                >  2:1757960/1‑109 (MQ=255)
                                           ttCTAACGGTAGTTGCGG‑AACCATTTAATGAGCGAATTCCCTGGATTCCCCGCCATCTTCCCCAGCCTTGCTTCCCCCAGTTCTTGCCCCACCAC‑CCCCCC‑CCCTACCGTAAACGAGCCGCCGACCCCTGAAATCcccc                                                                                             >  1:551766/1‑139 (MQ=255)
                                            tCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGcc                                                                                             <  1:1801156/139‑1 (MQ=255)
                                                aCGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCg                                                                                               >  1:1201638/1‑132 (MQ=255)
                                                aCGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCg                                                                                               <  2:1201638/132‑1 (MQ=255)
                                                   gTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCt                                                                                      <  1:48168/139‑1 (MQ=255)
                                                     aGTTTCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAgctg                                                                                                                >  2:378820/1‑111 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAgctg                                                                                                                <  1:378820/111‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAg                                                                                                                   <  2:276968/108‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAg                                                                                                                   >  1:276968/1‑108 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGctgctg                                                                                                             <  1:1270345/114‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGctgctg                                                                                                             >  2:1270345/1‑114 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGc                                                                                                        >  2:362392/1‑119 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGc                                                                                                        <  1:362392/119‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑cccccc‑cccg                                                                                                                               >  2:1445554/1‑93 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTAc                                                                                                                             >  1:409400/1‑97 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTAc                                                                                                                             <  2:409400/97‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAgctgc                                                                                                               <  1:1917430/111‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAgctgc                                                                                                               >  2:1917430/1‑111 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAgctg                                                                                                                <  2:1949852/110‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAgctg                                                                                                                >  1:1949852/1‑110 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATc                                                                                                 <  2:502156/125‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGAc                                                                                   >  1:755972/1‑139 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCC‑‑CAT‑cccc                                                                                                                                      <  1:410444/88‑1 (MQ=255)
                                                     aGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCC‑‑CAT‑cccc                                                                                                                                      >  2:410444/1‑88 (MQ=255)
                                                     aGTTGCGGCA‑‑AATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑cc                                                                                                                                        >  2:777928/1‑85 (MQ=255)
                                                     aGTTGCGGCA‑‑AATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑cc                                                                                                                                        <  1:777928/85‑1 (MQ=255)
                                                      gTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACg                                                                                  <  2:896459/139‑1 (MQ=255)
                                                      gTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACg                                                                                  <  2:1946985/139‑1 (MQ=255)
                                                       ttGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGc                                                                                 <  1:1578056/139‑1 (MQ=255)
                                                        tGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGc                                                                                 <  1:208328/139‑1 (MQ=255)
                                                          cGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTa                                                                                                                              >  1:1730959/1‑91 (MQ=255)
                                                          cGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTa                                                                                                                              <  2:1730959/91‑1 (MQ=255)
                                                            gCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGTCAGCATCTGACGCCAGTa                                                                            <  2:1991276/139‑1 (MQ=255)
                                                             caacaaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGata                                                                                                   <  2:1367016/116‑1 (MQ=255)
                                                             caacaaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCCGACCGCTGata                                                                                                   >  1:1367016/1‑116 (MQ=255)
                                                                   ttCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAgctg                                                                                                                >  1:1327996/1‑97 (MQ=255)
                                                                    tCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCC‑CCT‑CCCCCCGCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTa                                                                     <  2:1659627/139‑1 (MQ=255)
                                                                     cAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTAc                                                                    <  2:1513759/139‑1 (MQ=255)
                                                                       aTGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAgctgct                                                                                                              <  1:736591/95‑1 (MQ=255)
                                                                       aTGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAgctgct                                                                                                              >  2:736591/1‑95 (MQ=255)
                                                                          ggCGAATTTTCTGGAGTGGCCGGAATCGGCGCCATGCTTGCTGCGCGCAGTGCTGGCCGCA‑CAT‑CCCCCG‑CCGTGCGGTACTCGAGCTGCTGACGGCTGATATCCGCCAGCATATGACGCGAGTGCTCACTACGcgcca                                                              <  1:543505/138‑2 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCTTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAgctgct                                                                                                              <  1:775105/91‑1 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAgctgct                                                                                                              >  2:775105/1‑91 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGcc                                                                                >  1:1054733/1‑121 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGcc                                                                                <  2:1054733/121‑1 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgccc                                                              <  2:765570/139‑1 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgccc                                                              >  1:116381/1‑139 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGa                                                                                                            >  2:1494661/1‑92 (MQ=255)
                                                                           gCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGa                                                                                                            <  1:1494661/92‑1 (MQ=255)
                                                                             gATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACCCCAGTACTCACTACGcgccccg                                                            >  1:623459/1‑139 (MQ=255)
                                                                                     tGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAAt                                                    <  2:551766/139‑1 (MQ=255)
                                                                                          tCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACg                                                                                  >  2:1523302/1‑103 (MQ=255)
                                                                                          tCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACg                                                                                  <  1:1523302/103‑1 (MQ=255)
                                                                                            gccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCG‑CAGCATCt                                                                                      <  2:186841/96‑1 (MQ=255)
                                                                                            gccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCCGACCGCTGATATCCG‑CAGCATCt                                                                                      >  1:186841/1‑96 (MQ=255)
                                                                                             ccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATc                                                                                                                      <  2:516883/64‑1 (MQ=255)
                                                                                             ccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATc                                                                                                                      >  1:516883/1‑64 (MQ=255)
                                                                                             ccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAAt                                                    >  1:1294747/1‑130 (MQ=255)
                                                                                             ccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAAt                                                    <  2:1294747/130‑1 (MQ=255)
                                                                                             ccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAac                                           >  1:26230/1‑139 (MQ=255)
                                                                                                       cgcCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCAAGCATCTGACACCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGt                                 >  1:1257912/1‑139 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTTACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCCCCCCCAACCAACGTAACACGTTGCGGTTTAAt                            >  1:1225626/1‑139 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAg                                                                              <  1:571075/89‑1 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAg                                                                              >  2:571075/1‑89 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGTTTAAt                            >  1:280780/1‑139 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAgctgct                                                                                                              <  2:1892685/56‑1 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAgctgct                                                                                                              >  1:1892685/1‑56 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgccccgccc                                                         <  2:670030/109‑1 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgccccgccc                                                         >  1:670030/1‑109 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAAt                                                    >  1:1675948/1‑114 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAAt                                                    <  2:1675948/114‑1 (MQ=255)
                                                                                                             ccTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGTTTAATa                           >  1:326051/1‑139 (MQ=255)
                                                                                                                 gctgcGCCCAGTGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCACCGTAACACTTTg                                     >  2:1231239/1‑126 (MQ=255)
                                                                                                                            tGCTGGCCCCA‑CATCCCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGTTTAATACCGCAGGCATGCAc             <  2:280780/139‑1 (MQ=255)
                                                                                                                             gCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGCCCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCa                                                      >  2:1486182/1‑96 (MQ=255)
                                                                                                                             gCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCa                                                      <  1:1486182/96‑1 (MQ=255)
                                                                                                                                 gCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGttt                               <  2:1488841/115‑1 (MQ=255)
                                                                                                                                 gCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGATGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGttt                               >  1:1488841/1‑115 (MQ=255)
                                                                                                                                   cccA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGTTTAATACCGCAGGCATGCACGACATCCa     <  2:326051/139‑1 (MQ=255)
                                                                                                                                      a‑caT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCGCGCCCCCAATCAACGTAACACTTTGCGGTTTAATACCGCAGGCATGCACGACATCCAAGc  >  1:1261072/1‑139 (MQ=255)
                                                                                                                                      a‑caT‑CCCCCC‑CCGTAAGGTAATCGAGCTGCTGACCGCTGATATCCCCCAGCCTCTGACGCCAGTACCCACTACGCGCCCCGCCCCCAATCAACCTTACACCTTGCGGTTTAATACCCCAAGCATGCCCGACATCCATGc  >  2:773780/1‑139 (MQ=255)
                                                                                                                                           |                                                                                                                                        
GCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCA‑CAT‑CCCCCC‑CCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTAACACTTTGCGGTTTAATACCGCAGGCATGCACGACATCCATGC  >  NC_000913/3727973‑3728245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑