| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,409,250 | (T)8→7 | noncoding (122/122 nt) | fnrS → | FNR‑activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq‑dependent, mediates negative FNR regulation |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,409,243 | 0 | T | . | 100.0% | 269.1 / NA | 66 | noncoding (115/122 nt) | fnrS | FNR‑activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq‑dependent, mediates negative FNR regulation |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (34/32); total (34/32) | |||||||||||
ATTCAGGGCAATATCTCTCTTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTCCAGTGCCCG > NC_000913/1409108‑1409377 | aTTCAGGGCAATATCTCTCTTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttt < 1:475125/139‑1 (MQ=255) ttCAGGGCAATATCTCTCTTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCttttt > 1:261132/1‑139 (MQ=255) ggCAATATCTCTCTTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc < 1:105250/139‑4 (MQ=255) ctctTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGttatttat > 1:1526591/1‑139 (MQ=255) tctTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATc < 2:1548311/139‑1 (MQ=255) ctTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCACATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCa > 1:1200326/1‑139 (MQ=255) aGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTc < 2:261132/139‑1 (MQ=255) ggTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCt > 2:605492/1‑139 (MQ=255) tGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCtt > 2:1524348/1‑139 (MQ=255) cGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc > 1:1560123/1‑107 (MQ=255) cGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc < 2:1560123/110‑4 (MQ=255) aGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCa > 1:937613/1‑139 (MQ=255) aGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCa > 2:387365/1‑139 (MQ=255) aTGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCa < 2:1526591/139‑1 (MQ=255) cGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTg > 2:1338578/1‑98 (MQ=255) cGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTg < 1:1338578/98‑1 (MQ=255) cGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGAc < 1:1524348/139‑1 (MQ=255) gcgcTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCaga > 2:795663/1‑139 (MQ=255) gcgcTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCaga < 1:795663/139‑1 (MQ=255) cATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc < 2:440937/85‑3 (MQ=255) cATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc > 1:440937/1‑83 (MQ=255) tGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc < 1:53488/81‑4 (MQ=255) tGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc > 2:53488/1‑78 (MQ=255) cTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCACCCCAATGACCAGAGGGAAATATgacg > 2:461919/1‑139 (MQ=255) ttACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCACCCCAATGACCAGAGGGAAATATgacga < 1:461919/139‑1 (MQ=255) tACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCagag < 2:616583/124‑1 (MQ=255) tACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCagag > 1:616583/1‑124 (MQ=255) tACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGaca > 1:13159/1‑139 (MQ=255) cTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc < 1:1684037/74‑4 (MQ=255) cTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc > 2:1684037/1‑71 (MQ=255) cTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTa > 1:855064/1‑93 (MQ=255) cTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTa < 2:855064/93‑1 (MQ=255) cTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAAt > 2:70638/1‑114 (MQ=255) cTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAAt < 1:70638/114‑1 (MQ=255) ttttttGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACttattt > 1:369701/1‑139 (MQ=255) aaTTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCa < 2:1200326/139‑1 (MQ=255) cATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCaga > 2:745670/1‑101 (MQ=255) cATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCaga < 1:745670/101‑1 (MQ=255) tAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTc > 1:1164227/1‑139 (MQ=255) aGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTcc < 1:1418937/134‑1 (MQ=255) aGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTcc > 2:1418937/1‑134 (MQ=255) cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTc < 1:63597/66‑1 (MQ=255) cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTc > 2:63597/1‑66 (MQ=255) cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTcc > 1:252383/1‑82 (MQ=255) cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTcc < 2:252383/82‑1 (MQ=255) cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCt > 2:735396/1‑139 (MQ=255) caATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGaca < 1:1058996/110‑1 (MQ=255) caATTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGaca > 2:1058996/1‑110 (MQ=255) aaTTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc < 1:1614456/45‑3 (MQ=255) aaTTGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc > 2:1614456/1‑43 (MQ=255) aaTTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATgac < 1:30490/105‑1 (MQ=255) aaTTGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATgac > 2:30490/1‑105 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc < 2:1366804/44‑4 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc > 2:213273/1‑41 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc < 1:213273/44‑4 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgcc > 1:1366804/1‑41 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc < 2:1362002/43‑3 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc > 1:1362002/1‑41 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc > 1:940582/1‑41 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGCtttttttgc < 2:940582/43‑3 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTcc < 2:1363842/77‑1 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTcc > 1:1363842/1‑77 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTcc > 2:1120151/1‑127 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAAcc < 2:937613/139‑1 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAAcc < 2:882871/139‑1 (MQ=255) ttGATTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTAGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTcc < 1:1120151/127‑1 (MQ=255) aTTCGTACGACGCCGACTTTGATGAGTCGGCtttttttg < 2:55494/39‑2 (MQ=255) aTTCGTACGACGCCGACTTTGATGAGTCGGCtttttttg > 1:55494/1‑38 (MQ=255) aTTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGttatttat < 1:220352/51‑1 (MQ=255) aTTCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGttatttat > 2:220352/1‑51 (MQ=255) tCGTACGACGCCGACTTTGATGAGTCGGCttttttt > 2:978080/1‑36 (MQ=255) tCGTACGACGCCGACTTTGATGAGTCGGCttttttt < 1:978080/36‑1 (MQ=255) tCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTc < 2:63322/56‑1 (MQ=255) tCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTc > 1:63322/1‑56 (MQ=255) tCGTACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTc > 1:970398/1‑139 (MQ=255) tACGACGCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTg < 1:605492/139‑1 (MQ=255) cgacgCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGc < 2:1164227/139‑1 (MQ=255) cgCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGtt < 2:1508703/35‑1 (MQ=37) cgCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGtt > 1:1508703/1‑35 (MQ=37) cgCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTc > 1:1474764/1‑48 (MQ=37) cgCCGACTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTc < 2:1474764/48‑1 (MQ=37) aCTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTa > 2:351427/1‑45 (MQ=37) aCTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTa < 1:351427/45‑1 (MQ=37) aCTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGc > 2:1303725/1‑102 (MQ=255) aCTTTGATGAGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGc < 1:1303725/102‑1 (MQ=255) tttatgaGTCTGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTcc < 2:13159/136‑1 (MQ=255) aGTCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTCCAGTGcc < 1:735396/139‑1 (MQ=255) tCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTCCAGTGcc > 1:170223/1‑137 (MQ=255) tCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTCCAGTGcc < 2:170223/137‑1 (MQ=255) tCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTCCAGTGCccg > 2:1397077/1‑139 (MQ=255) tCGGC‑TTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTCCAGTGCccg > 1:1482194/1‑139 (MQ=255) | ATTCAGGGCAATATCTCTCTTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCA‑CCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGTTCCAGTGCCCG > NC_000913/1409108‑1409377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |