| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,950,559 | (C)5→6 | intergenic (‑37/‑273) | aspS ← / → yecD | aspartyl‑tRNA synthetase/isochorismatase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,950,554 | 1 | . | C | 96.3% | 280.6 / 2.0 | 81 | intergenic (‑32/‑278) | aspS/yecD | aspartyl‑tRNA synthetase/isochorismatase family protein |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base C (38/40); total (40/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.84e-01 | |||||||||||
ATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAC > NC_000913/1950422‑1950683 | aTCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccc > 2:1051437/1‑138 (MQ=255)aTCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccc > 2:1244094/1‑138 (MQ=255)aTCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccc > 1:573982/1‑138 (MQ=255) cAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctg > 1:545148/1‑136 (MQ=255) ggCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctgct > 2:974751/1‑134 (MQ=255) ggCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctgct > 1:482479/1‑134 (MQ=255) gCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCctgctg > 1:1327090/1‑139 (MQ=255) cAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAg < 2:573982/139‑1 (MQ=255) tCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGAc > 1:731943/1‑139 (MQ=255) tCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccc < 2:870529/124‑2 (MQ=255) tCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccc > 1:870529/1‑123 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCctgctg < 2:528954/125‑1 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCctgctg > 1:528954/1‑125 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAg > 1:583471/1‑139 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAg > 1:91083/1‑139 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑ccc > 2:1783883/1‑117 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑ccc < 1:1783883/117‑1 (MQ=255) cgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTc < 2:731943/139‑1 (MQ=255) cgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTc < 1:1244094/139‑1 (MQ=255) tcgGTTGACCCAACAACACAGAGCCACCTGCTGCCCCACGTGGGACAAACGCAGCTGTCCACAATATTCTGTACGCATGAGTTATCCCTTGACTTAGCTGCCGGCGGATCC‑CCCCCTCCTGCGCAGGTGACCAAGTCGc > 1:1608405/2‑139 (MQ=255) acgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGc < 2:393275/139‑1 (MQ=255) cgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCa > 2:712745/1‑139 (MQ=255) cccAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 2:1589160/139‑1 (MQ=255) aaCCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 1:974751/139‑1 (MQ=255) ccACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTa > 2:875085/1‑139 (MQ=255) agTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACaa < 2:91083/139‑1 (MQ=255) tCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctg > 2:1549383/1‑92 (MQ=255) tCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctg < 1:1549383/95‑4 (MQ=255) tgcCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 1:918729/116‑1 (MQ=255) tgcCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg > 2:918729/1‑116 (MQ=255) ccccACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTATATTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGaaaaa > 1:825270/1‑139 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 1:1051437/139‑1 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:482479/139‑1 (MQ=255) cGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggcg > 2:1141503/1‑139 (MQ=255) gACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACaa > 2:1793070/1‑117 (MQ=255) gACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACaa < 1:1793070/117‑1 (MQ=255) gACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 1:931594/133‑1 (MQ=255) gACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 2:931594/1‑133 (MQ=255) aCAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 2:578087/1‑132 (MQ=255) aCAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 1:578087/132‑1 (MQ=255) gAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTgg > 1:209274/1‑139 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACtgaa < 1:330943/103‑1 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACtgaa > 2:330943/1‑103 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCg < 1:1141503/139‑1 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCg < 2:583471/139‑1 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGc < 1:551606/75‑1 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGc > 2:551606/1‑75 (MQ=255) tGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa < 2:1316832/139‑1 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 2:81511/104‑1 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 1:81511/1‑104 (MQ=255) gCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 2:1129688/73‑1 (MQ=255) gCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg > 1:1129688/1‑73 (MQ=255) gCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGc > 2:125012/1‑139 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACTACTGAATGAAAAAAg < 1:1200096/98‑1 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAg > 2:1200096/1‑98 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCt > 2:795768/1‑139 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCt > 2:640456/1‑139 (MQ=255) gagaTATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctg < 1:159132/40‑4 (MQ=255) gagaTATCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctg > 2:159132/1‑37 (MQ=255) gaTATCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGcc < 1:876784/139‑1 (MQ=255) atatCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTca < 1:559245/76‑1 (MQ=255) atatCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTca > 2:559245/1‑76 (MQ=255) atatCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctg > 1:534527/1‑34 (MQ=255) atatCCCTTAACTTAGCTGCCGGCGGAT‑G‑cccccctg < 2:534527/37‑4 (MQ=255) tCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCta < 2:151049/97‑1 (MQ=255) tCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCta > 1:151049/1‑97 (MQ=255) tCCCTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCcgcg > 2:585111/1‑139 (MQ=255) ccTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGc < 1:823514/53‑1 (MQ=38) ccTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGc > 2:823514/1‑53 (MQ=38) ccTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt > 1:247544/1‑58 (MQ=39) ccTTAACTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt < 2:247544/58‑1 (MQ=39) aaCTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAAc < 2:1790122/71‑1 (MQ=255) aaCTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAAc > 1:1790122/1‑71 (MQ=255) aaCTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 1:1126034/86‑1 (MQ=255) aaCTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 2:1126034/1‑86 (MQ=255) aaCTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCcgcg > 1:1349893/1‑133 (MQ=255) aaCTTAGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCcgcg < 2:1349893/133‑1 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 1:104965/52‑1 (MQ=38) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg > 2:104965/1‑52 (MQ=38) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCta > 1:1620775/1‑86 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCta < 2:1620775/86‑1 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGc > 1:890781/1‑104 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGc < 2:890781/104‑1 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 2:47891/1‑113 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa < 1:47891/113‑1 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTgg > 1:1766934/1‑132 (MQ=255) aGCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTgg < 2:1766934/132‑1 (MQ=255) gCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTc > 1:1050495/1‑139 (MQ=255) gCTGCCGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTc > 2:775551/1‑139 (MQ=255) ccGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 2:825270/139‑1 (MQ=255) ccGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 2:1050495/139‑1 (MQ=255) ccGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 1:775551/139‑1 (MQ=255) ccGGCGGAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 1:712745/139‑1 (MQ=255) ccGGCGGAT‑G‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc > 2:1754456/1‑75 (MQ=255) ccGGCGGAT‑G‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 1:1754456/75‑1 (MQ=255) cggcggAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAc < 2:1327090/139‑1 (MQ=255) cggcggAT‑GCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAc > 1:1649848/1‑139 (MQ=255) | ATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGAT‑G‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAC > NC_000913/1950422‑1950683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |