| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,484,897 | (C)6→7 | coding (524/3594 nt) | evgS → | hybrid sensory histidine kinase in two‑component regulatory system with EvgA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,484,891 | 1 | . | C | 97.5% | 286.0 / ‑1.5 | 81 | coding (518/3594 nt) | evgS | hybrid sensory histidine kinase in two‑component regulatory system with EvgA |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (38/41); total (39/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑CC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAG > NC_000913/2484758‑2485023 | ccgccTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGAGTAGCAACTTA‑cc‑ccc > 1:1418826/1‑139 (MQ=255) tctTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga < 2:1243522/139‑5 (MQ=255) tctTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga < 1:1348116/139‑5 (MQ=255) ttAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACg < 1:1239812/139‑1 (MQ=255) taatGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGt < 2:217581/139‑1 (MQ=255) aatGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTa < 1:298028/139‑1 (MQ=255) aCATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATtc > 2:1675150/1‑139 (MQ=255) aCATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATtc > 2:1739954/1‑139 (MQ=255) cATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATtca > 1:1698939/1‑139 (MQ=255) cATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑CCACCCCAGCCGAGGTAATtca > 2:230778/1‑139 (MQ=255) ttGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATtgatc > 2:1157130/1‑139 (MQ=255) tgctgcAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga < 1:452278/124‑5 (MQ=255) tgctgcAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga > 2:452278/1‑120 (MQ=255) accaaaccaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTaa < 1:780292/125‑1 (MQ=255) accaaaccaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTaa > 2:780292/1‑125 (MQ=255) accaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga < 1:1649451/112‑5 (MQ=255) accaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga > 2:1649451/1‑108 (MQ=255) aTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGc < 1:1675150/139‑1 (MQ=255) gATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGcaac > 1:837107/1‑139 (MQ=255) aTTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAAtt < 2:864485/139‑1 (MQ=255) aTTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAAtt < 1:1739954/139‑1 (MQ=255) tACCTTTCCTGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCACACCAAAACCACTAAATATTGCTCGGGTAGCAAATTA‑CCTCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAt < 1:176501/139‑1 (MQ=255) tACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAt < 2:118975/139‑1 (MQ=255) ttCCGGCGCTTGTAAACACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCtt > 2:176501/1‑139 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCtt > 2:247312/1‑139 (MQ=255) ccGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGAAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCtttt > 2:717708/1‑139 (MQ=255) gTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCatcaa > 2:956243/1‑100 (MQ=255) gTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCatcaa < 1:956243/100‑1 (MQ=255) aaCCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTtata < 1:247312/139‑1 (MQ=255) ccTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTACTTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGc > 1:531766/1‑139 (MQ=255) ccTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGc > 2:970869/1‑139 (MQ=255) ttCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCAt < 2:837107/139‑1 (MQ=255) tCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATc > 1:528212/1‑132 (MQ=255) tCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATc < 2:528212/132‑1 (MQ=255) taccaactGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTAAATCAGGCATTAGCa < 1:717708/132‑1 (MQ=255) gACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 1:1137668/139‑1 (MQ=255) tCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAtct < 1:812898/107‑1 (MQ=255) tCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAtct > 2:812898/1‑107 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCa > 2:447525/1‑87 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCa < 1:447525/87‑1 (MQ=255) gACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAt < 2:1349662/98‑1 (MQ=255) gACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAt > 1:1349662/1‑98 (MQ=255) ccGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTTATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCTGCt < 1:1157130/139‑1 (MQ=255) ccGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCt > 1:886818/1‑139 (MQ=255) ccGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCt > 2:1207328/1‑139 (MQ=255) cTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga > 2:1231844/1‑50 (MQ=255) cTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cccccaga < 1:1231844/54‑5 (MQ=255) ttACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGc < 1:1647135/139‑1 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCaaa > 1:1541895/1‑79 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCaaa < 2:1541895/79‑1 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTtata < 1:1574940/109‑1 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTtata > 2:1574940/1‑109 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cc < 1:1528078/46‑1 (MQ=255) tACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑cc‑cc > 2:1528078/1‑46 (MQ=255) aCCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTaa < 1:573503/54‑1 (MQ=255) aCCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTaa > 2:573503/1‑54 (MQ=255) aCCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGa > 1:1762478/1‑139 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAg < 1:306652/125‑1 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAg > 2:306652/1‑125 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt < 2:60033/139‑1 (MQ=255) ccAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt < 2:260191/139‑1 (MQ=255) aaaCCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTAc < 2:531766/139‑1 (MQ=255) aaCCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTgg > 1:1227329/1‑125 (MQ=255) aaCCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTgg < 2:1227329/125‑1 (MQ=255) aaCCAGTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACt > 2:958512/1‑139 (MQ=255) gTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGc > 1:83711/1‑122 (MQ=255) gTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGc < 2:83711/122‑1 (MQ=255) gTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt < 2:5267/130‑1 (MQ=255) gTAAATATTGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt > 1:5267/1‑130 (MQ=255) ttGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGgtagta < 2:686133/139‑1 (MQ=255) tGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCttt < 2:579842/73‑1 (MQ=255) tGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCttt > 1:579842/1‑73 (MQ=255) tGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATTTCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTaa > 1:592975/1‑139 (MQ=255) tGCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTaa > 1:1441146/1‑139 (MQ=255) gCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGa > 1:1083876/1‑120 (MQ=255) gCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGa < 2:1083876/120‑1 (MQ=255) gCTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAc > 2:581822/1‑139 (MQ=255) cTCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAca < 1:1207328/139‑1 (MQ=255) tCGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAcat > 1:1788868/1‑139 (MQ=255) cGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAcatc < 1:958512/139‑1 (MQ=255) cGGGTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAcatc < 2:1305201/139‑1 (MQ=255) gTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTAtt > 1:615884/1‑124 (MQ=255) gTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTAtt < 2:615884/124‑1 (MQ=255) gTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAca > 2:1786448/1‑134 (MQ=255) gTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAca < 1:1786448/134‑1 (MQ=255) gTAGCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCAtt > 1:1208822/1‑139 (MQ=255) gCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATTTCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTAcc < 2:592975/139‑1 (MQ=255) gCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGca > 1:1632145/1‑105 (MQ=255) gCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGca < 2:1632145/105‑1 (MQ=255) gCAAATTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTAcc > 2:1314503/1‑139 (MQ=255) aaaTTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACcag < 1:970869/139‑1 (MQ=255) aaaTTACCC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCAACCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACcag < 2:1698939/139‑1 (MQ=255) | CCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTA‑CC‑CCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAG > NC_000913/2484758‑2485023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |