| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,939,673 | T→C | N174S (AAC→AGC) | lpxM ← | myristoyl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,939,673 | 0 | T | C | 100.0% | 275.8 / NA | 76 | N174S (AAC→AGC) | lpxM | myristoyl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (39/37); total (39/37) | |||||||||||
CTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGTTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCT > NC_000913/1939549‑1939802 | ctctGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCa > 2:335302/1‑139 (MQ=255) gggCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCaaaaa > 1:316328/1‑139 (MQ=255) aTGATCCTGATCGGGTAAATAATATCCCCAGTACACCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCggg < 1:335302/139‑1 (MQ=255) tGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAAt > 2:1443363/1‑127 (MQ=255) tGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAAt < 1:1443363/127‑1 (MQ=255) gATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACAt > 1:660521/1‑123 (MQ=255) gATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACAt < 2:660521/123‑1 (MQ=255) tcttGATCGGTTAAATAATACCCCCGGTACCCCTGCCGACCCGCTTGAATGAATGGTTT‑ATTCCCTTAATTCTCCGAAGCAAGACGACCGCCAAAGCGA‑GGCGCAACGTTCCCCAGACCTTAACCAAAACCCGGTTggc < 1:514625/136‑3 (MQ=255) ccTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 2:564201/139‑1 (MQ=255) tGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCt < 2:316328/139‑1 (MQ=255) ggTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:785649/1‑131 (MQ=255) ggTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 1:785649/131‑1 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 1:816933/130‑1 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:816933/1‑130 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATg > 2:514625/1‑139 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATg > 2:222394/1‑139 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTAATTATg > 1:95906/1‑139 (MQ=255) aataTCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTAATTATGGAACAt < 2:95906/139‑1 (MQ=255) tatCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCg < 1:222394/139‑1 (MQ=255) tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 1:1203830/120‑1 (MQ=255) tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:1203830/1‑120 (MQ=255) tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCt > 1:992742/1‑139 (MQ=255) aGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCAt > 1:800971/1‑139 (MQ=255) gTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCAtt < 2:151410/139‑1 (MQ=255) cccTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCt < 2:601969/112‑1 (MQ=255) cccTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCt > 1:601969/1‑112 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:725505/1‑108 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 1:725505/108‑1 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGaa < 1:1178706/120‑1 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGaa > 2:1178706/1‑120 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCg > 2:521676/1‑125 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCg < 1:521676/125‑1 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGc > 1:856060/1‑139 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGc > 2:1293192/1‑139 (MQ=255) gTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 1:1082927/103‑1 (MQ=255) gTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:1082927/1‑103 (MQ=255) aCCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCg < 1:191097/139‑1 (MQ=255) aCCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCg > 2:1569947/1‑139 (MQ=255) aCCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAACCAAAAACCGGGTTGCCCt > 1:1525147/1‑103 (MQ=255) aCCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAACCAAAAACCGGGTTGCCCt < 2:1525147/103‑1 (MQ=255) gACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 1:1492876/1‑98 (MQ=255) gACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 2:1492876/98‑1 (MQ=255) aCTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGc > 1:82837/1‑96 (MQ=255) aCTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGc < 2:82837/96‑1 (MQ=255) tGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCa > 2:1740633/1‑139 (MQ=255) gATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 1:891194/93‑1 (MQ=255) gATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:891194/1‑93 (MQ=255) aTGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCAt < 1:127307/139‑1 (MQ=255) tGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGTCCTTGCGAGGCCATCAGCATg > 2:862707/1‑139 (MQ=255) tACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCAtttt < 1:231341/106‑1 (MQ=255) tACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCAtttt > 2:231341/1‑106 (MQ=255) cGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATc < 1:1569947/139‑1 (MQ=255) cGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATc < 2:800971/139‑1 (MQ=255) gTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGc < 1:930264/129‑1 (MQ=255) gTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGc > 2:930264/1‑129 (MQ=255) tCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCt > 1:464852/1‑76 (MQ=255) tCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCt < 2:464852/76‑1 (MQ=255) tCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTg > 1:678347/1‑94 (MQ=255) tCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTg < 2:678347/94‑1 (MQ=255) tCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGa > 2:1786036/1‑139 (MQ=255) cATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCggg < 1:1541542/59‑1 (MQ=255) cATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCggg > 2:1541542/1‑59 (MQ=255) gC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTg < 2:856060/139‑1 (MQ=255) gC‑AGACGACCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCACAACCGTg < 1:1786036/139‑1 (MQ=255) gacgacCGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCgg > 2:1279121/1‑139 (MQ=255) ccGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGct < 1:1121054/53‑2 (MQ=255) ccGCCAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:1121054/1‑53 (MQ=255) ccAAAGCGACTACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc < 1:1571231/50‑1 (MQ=255) ccAAAGCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGcc > 2:1571231/1‑50 (MQ=255) gCGACGACGCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATa > 1:622680/1‑139 (MQ=255) acgacgCACCGTGCTCCAGACATAATCAAAAACCGGGTTGc < 2:382624/41‑1 (MQ=255) acgacgCACCGTGCTCCAGACATAATCAAAAACCGGGTTGc > 1:382624/1‑41 (MQ=255) acgacgCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACt > 1:1049409/1‑139 (MQ=255) cgCACCGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTtct < 2:992742/139‑1 (MQ=255) ccGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGc > 2:1537721/1‑83 (MQ=255) ccGTGCTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGc < 1:1537721/83‑1 (MQ=255) | CTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATACCGTCATTTCTCGCATGC‑AGACGACCGCCAAAGCGACGACGCACCGTGTTCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCT > NC_000913/1939549‑1939802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |