Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,712,518	(C)6→7	intergenic (+360/‑251)	nth → / → dtpA	DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,712,512	1	.	C	100.0%	246.2 / NA	71	intergenic (+354/‑257)	nth/dtpA	DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (36/35);  total (36/35)

ATCAGGTTAAAATCATTTAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑CCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAGGACTTGTCTGA  >  NC_000913/1712376‑1712645                                                                                                                                           |                                                                                                                                      aTCAGGTTAAAATCATTTAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑cc                                                                                                                                     <  2:643152/139‑1 (MQ=255)  tCAGGTTAAAATCATTTAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑ccc                                                                                                                                    <  2:1132677/139‑1 (MQ=255)  tCAGGTTAAAATCATTTAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑ccc                                                                                                                                    <  1:564806/139‑1 (MQ=255)    aGGTTAAAATCATTTAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑ccccc                                                                                                                                  <  2:254820/139‑1 (MQ=255)              cATTTAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTcagtg                                                                                                                         <  1:308665/139‑1 (MQ=255)                tttAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑ccccc                                                                                                                                  >  1:1221391/1‑127 (MQ=255)                tttAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑ccccc                                                                                                                                  <  2:1221391/127‑1 (MQ=255)                               gCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATc                                                                                                            >  2:502386/1‑135 (MQ=255)                               gCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATc                                                                                                            <  1:502386/135‑1 (MQ=255)                                 aacaaATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGt                                                                                                      >  1:1589593/1‑139 (MQ=255)                                         ttGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGtttt                                                                                              >  2:1474909/1‑139 (MQ=255)                                           gACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGtttttt                                                                                            >  1:1255847/1‑139 (MQ=255)                                           gACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGtttttt                                                                                            >  1:372118/1‑139 (MQ=255)                                              cTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGaa                                                                                         >  1:238494/1‑139 (MQ=255)                                                 cAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGaaaaa                                                                                      >  1:226309/1‑139 (MQ=255)                                                      cATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTaa                                                                                 >  1:530039/1‑139 (MQ=255)                                                                gCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATaa                                                                       >  1:1530595/1‑139 (MQ=255)                                                                gCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATaa                                                                       >  2:66003/1‑139 (MQ=255)                                                                gCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATaa                                                                       >  2:948961/1‑139 (MQ=255)                                                                gCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATaa                                                                       >  1:331555/1‑139 (MQ=255)                                                                gCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑cc                                                                                                                                     >  2:1468606/1‑76 (MQ=255)                                                                gCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑cc                                                                                                                                     <  1:1468606/76‑1 (MQ=255)                                                                     ttttCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACAttt                                                                  >  2:846218/1‑139 (MQ=255)                                                                          aGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCgg                                                             >  2:1017100/1‑139 (MQ=255)                                                                                  tataagagacagaGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTg                                                     <  1:426589/127‑1 (MQ=255)                                                                                    cTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGaa                                                   <  2:1548166/139‑1 (MQ=255)                                                                                       tctcACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTc                                                <  1:66003/139‑1 (MQ=255)                                                                                        ctcACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTcagtg                                                                                                                         >  1:1421626/1‑65 (MQ=255)                                                                                        ctcACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTcagtg                                                                                                                         <  2:1421626/65‑1 (MQ=255)                                                                                         tcACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAGAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTccc                                              <  1:1032907/139‑1 (MQ=255)                                                                                          cACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTcccc                                             >  2:1544523/1‑139 (MQ=255)                                                                                            cTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGc                                           <  2:238494/139‑1 (MQ=255)                                                                                            cTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGc                                           >  2:829089/1‑139 (MQ=255)                                                                                              aGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCt                                         <  1:1573334/139‑1 (MQ=255)                                                                                              aGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCt                                         <  2:331555/139‑1 (MQ=255)                                                                                              aGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCt                                         <  2:1530595/139‑1 (MQ=255)                                                                                              aGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCt                                         <  2:372118/139‑1 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGaa                                                           >  2:28030/1‑118 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGaa                                                           <  1:28030/118‑1 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  2:226309/139‑1 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      >  2:1108288/1‑139 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      >  2:998163/1‑139 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  1:1571505/139‑1 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  1:1544523/139‑1 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  1:829089/139‑1 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  1:846218/139‑1 (MQ=255)                                                                                                 aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCCCAGTGCAGTGAAAAAACCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGTTAACATTTCCCGGAATGGTTGATTTCCCCGCTTCAg                                      >  1:262348/1‑139 (MQ=255)                                                                                                  aaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGt                                     <  2:556102/139‑1 (MQ=255)                                                                                                  aaaaCGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGt                                     >  2:85809/1‑139 (MQ=255)                                                                                                       gCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      >  1:1297121/1‑133 (MQ=255)                                                                                                       gCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  2:1297121/133‑1 (MQ=255)                                                                                                         tAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGc                                           <  1:682304/126‑1 (MQ=255)                                                                                                         tAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGc                                           >  2:682304/1‑126 (MQ=255)                                                                                                         tAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  1:993193/131‑1 (MQ=255)                                                                                                         tAAATAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      >  2:993193/1‑131 (MQ=255)                                                                                                          aaaTAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGaa                                                           <  2:1131660/109‑1 (MQ=255)                                                                                                          aaaTAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGaa                                                           >  1:1131660/1‑109 (MQ=255)                                                                                                          aaaTAGCAGAACATATCGCCATTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTccc                                              <  2:1378547/122‑1 (MQ=255)                                                                                                          aaaTAGCAGAACATATCGCCATTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTccc                                              >  1:1378547/1‑122 (MQ=255)                                                                                                           aaTAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTaa                            <  1:948961/139‑1 (MQ=255)                                                                                                             tAGCAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTGACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACa                          <  1:998163/139‑1 (MQ=255)                                                                                                                cAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      <  1:638740/124‑1 (MQ=255)                                                                                                                cAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAg                                      >  2:638740/1‑124 (MQ=255)                                                                                                                cAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGat                       <  2:1589593/139‑1 (MQ=255)                                                                                                                cAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGat                       <  1:455370/139‑1 (MQ=255)                                                                                                                cAGAACATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGat                       <  2:1255847/139‑1 (MQ=255)                                                                                                                     cATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGACTTCCCCGCCTCAGTTATATGTAACAGAttatta                  >  2:1018084/1‑139 (MQ=255)                                                                                                                     cATATCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGAttatta                  >  1:1549855/1‑139 (MQ=255)                                                                                                                        atCGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACaa               >  1:495494/1‑139 (MQ=255)                                                                                                                          tcccGTTAAGCCCACAA‑CCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAg             <  2:262348/137‑1 (MQ=255)                                                                                                                          cGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTaa                                                                                 <  2:531867/71‑1 (MQ=255)                                                                                                                          cGCCGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTaa                                                                                 >  1:531867/1‑71 (MQ=255)                                                                                                                            ccGTTAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAGGa           <  1:85809/139‑1 (MQ=255)                                                                                                                               ttAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCt                                         <  1:312416/106‑1 (MQ=255)                                                                                                                               ttAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCt                                         >  2:312416/1‑106 (MQ=255)                                                                                                                               ttAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAGGACtt        >  1:1353364/1‑139 (MQ=255)                                                                                                                                tAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAGGAc          >  2:1018730/1‑136 (MQ=255)                                                                                                                                tAAG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAGGAc          <  1:1018730/136‑1 (MQ=255)                                                                                                                                 aaG‑CCATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAGGACTTGt      >  1:800369/1‑139 (MQ=255)                                                                                                                                      cATCACCCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCTGCCTCCGTTATATGTAACAGATTATTACAAAGGACTTGTCTGa  <  1:1108288/139‑1 (MQ=255)                                                                                                                                           |                                                                                                                                      ATCAGGTTAAAATCATTTAAATTTACACACGCAACAAATATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAG‑CCATCA‑CCCCCCTCTCAGTGCAGTGAAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCAGTTATATGTAACAGATTATTACAAAGGACTTGTCTGA  >  NC_000913/1712376‑1712645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑