| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,090,046 | G→A | *17* (TAG→TAA) | hisL → | his operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,090,046 | 0 | G | A | 99.7% | 951.7 / NA | 290 | *17* (TAG→TAA) | hisL | his operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (135/153); minor base T (1/0); total (136/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 290 total aligned reads displayed.
AATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGA > NC_000913/2089911‑2090180 | tataAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCa > 2:567584/1‑139 (MQ=255) tataAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCa > 1:1074596/1‑139 (MQ=255) tataAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCa > 1:415681/1‑139 (MQ=255) ataAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAg < 1:977010/139‑1 (MQ=255) aaaGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAt < 1:1105279/139‑1 (MQ=255) aaaGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAt < 1:567584/139‑1 (MQ=255) aaaGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCAACATCACCATCATCCTGACTAATCTTTCAGGCGAt < 2:850832/139‑1 (MQ=255) aaGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtg < 1:1047975/139‑1 (MQ=255) aGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtgt > 2:825152/1‑139 (MQ=255) aGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtgt > 1:177588/1‑139 (MQ=255) cccTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCg < 1:673735/133‑1 (MQ=255) cccTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtgtgt > 2:452898/1‑139 (MQ=255) cccTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtgtgt > 1:1120186/1‑139 (MQ=255) cccTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCA‑GCGAtgtgtt > 1:546745/1‑138 (MQ=255) cTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGa < 2:396498/139‑1 (MQ=255) tttCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGaa < 1:825152/139‑1 (MQ=255) tttCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGaa < 1:917068/139‑1 (MQ=255) tGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtgtg < 2:363400/122‑1 (MQ=255) gAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGa < 1:506288/139‑1 (MQ=255) aaGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCCTCACCATCATCCTGACTAATCTTTCAGGCGAtgtg > 2:454150/1‑119 (MQ=255) aaGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtgtg < 1:454150/119‑1 (MQ=255) ttttAGTTAAAAAGACACCA‑TTTAATAAACCATCACCAGGAATTTTTAGGCCCCGCGTCCAATTAAACCCCCACCACCATCACCACCATCCTGCCTA‑ACTTTTCGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAg < 2:546745/138‑1 (MQ=255) tttAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAg < 2:669353/139‑1 (MQ=255) ggTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgtggt < 1:219622/139‑1 (MQ=255) gTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgtggtg < 1:988052/139‑1 (MQ=255) aaaGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGaa < 2:584004/112‑1 (MQ=255) aaaGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCa < 2:638186/120‑1 (MQ=255) aaaGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCa > 1:638186/1‑120 (MQ=255) aaaGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATg > 1:1079437/1‑139 (MQ=255) aaGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGa > 1:723705/1‑139 (MQ=255) gACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAAc < 1:254861/139‑1 (MQ=255) cATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACAt < 1:735888/112‑1 (MQ=255) cATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACAt > 2:735888/1‑112 (MQ=255) aTCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCg < 1:369129/93‑1 (MQ=255) aTCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCg > 2:369129/1‑93 (MQ=255) aTCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAt > 1:1007002/1‑95 (MQ=255) tCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCAt > 2:798118/1‑139 (MQ=255) aTAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGc < 2:1120186/139‑1 (MQ=255) tAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAt > 2:109220/1‑85 (MQ=255) aaCATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGcccc < 1:798118/139‑1 (MQ=255) aCATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGccccc < 1:1301255/139‑1 (MQ=255) aCATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATAATCCTGACTAATCTTTCAgg < 2:771836/78‑1 (MQ=255) aTTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAgg < 2:892942/76‑1 (MQ=255) aTTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAg < 1:243711/75‑1 (MQ=255) aTTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtg > 2:1068462/1‑81 (MQ=255) ca‑caGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAgg > 2:262157/1‑73 (MQ=255) a‑caGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGa < 1:331674/86‑1 (MQ=255) a‑caGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGa > 2:331674/1‑86 (MQ=255) a‑caGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGa < 2:73926/139‑1 (MQ=255) gagaCTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTc < 2:161913/99‑1 (MQ=255) gagaCTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCa < 2:979942/139‑1 (MQ=255) agaCTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAg > 2:72691/1‑84 (MQ=255) agaCTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCAc < 2:162470/139‑1 (MQ=255) agaCTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCAc > 2:228247/1‑139 (MQ=255) aTGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCggg < 2:373473/139‑1 (MQ=255) cacGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGCCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATg > 2:1165822/1‑98 (MQ=255) cacGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGaaa < 2:599233/111‑1 (MQ=255) cacGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGaaa > 1:726983/1‑111 (MQ=255) cgcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtg < 2:559258/59‑1 (MQ=255) cgcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGaa < 1:162463/69‑1 (MQ=255) cgcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGaa > 2:245237/1‑69 (MQ=255) cgcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCttt > 1:1243726/1‑139 (MQ=255) ttCAATTTAAACACCACCATCATCACCATCATCCTGACTAATCttt < 2:1027912/46‑1 (MQ=255) tttAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTgcg < 2:293565/139‑1 (MQ=255) tttAAACACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTgcg < 2:1140696/139‑1 (MQ=255) aaCACCACCATCATCACCATCATCCTGACTAATCTTTCAGGCGAtgtg < 1:77330/48‑1 (MQ=255) ccaccaTCATCACCATCATCCTGACTAATCTTTCAGGCGAt < 2:191934/41‑1 (MQ=255) ccaccaTCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGaa < 1:270463/52‑1 (MQ=255) ccaccaTCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAg > 1:1156657/1‑53 (MQ=255) ccaccaTCATCACCATCATCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGaa > 2:100604/1‑81 (MQ=255) caccatcatcaccatcatCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATgaga > 2:212566/1‑89 (MQ=255) caccatcatcaccatcatCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCgg > 2:429150/1‑114 (MQ=255) caccatcatcaccatcatCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCgg < 1:429150/114‑1 (MQ=255) caccatcatcaccatcatCCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATa < 2:1246807/139‑1 (MQ=255) accatcatcaccatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGaa > 1:573487/1‑50 (MQ=255) accatcatcaccatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGa < 1:766908/60‑1 (MQ=255) accatcatcaccatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTgcg < 2:1196774/129‑1 (MQ=255) accatcatcaccatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTgcg > 1:1196774/1‑129 (MQ=255) accatcatcaccatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATaa < 2:513188/139‑1 (MQ=255) tcaccatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATa < 1:1005620/131‑1 (MQ=255) tcaccatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCa > 2:350667/1‑139 (MQ=255) accatcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGa < 1:1179676/139‑1 (MQ=255) atcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCg > 2:1079298/1‑100 (MQ=255) tcatcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAg > 2:685860/1‑55 (MQ=255) catcCTGACTAATCTTTCAGGCGATGTGTGCTGGa < 1:926610/35‑1 (MQ=255) catcCTGACTAATCTTTCAGGCGATGTGTGCTGGa > 2:926610/1‑35 (MQ=255) catcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGt > 1:1092372/1‑139 (MQ=255) tcCTGACTATTCTTTCAGGCGATGTGTGCTGTAAGACATCCAGATCGACCAGTGGTCCATGAACGCATTGGAAAGCCCCGGTAAGCGCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAGCGGTTCAGACAGGctt > 2:501633/1‑139 (MQ=255) tcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAg < 1:87748/35‑1 (MQ=255) tcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAg < 1:357578/52‑1 (MQ=255) tcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGttt > 2:751215/1‑139 (MQ=255) tcCTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGttt > 2:1183109/1‑139 (MQ=255) ccTGACTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAg > 1:59035/1‑51 (MQ=255) aCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTc > 1:192272/1‑36 (MQ=255) aCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCCGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCggg < 2:869490/93‑1 (MQ=255) aCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCggggg < 1:1140487/95‑1 (MQ=255) aCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTgcg < 1:651372/108‑1 (MQ=255) aCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTgcg > 2:651372/1‑108 (MQ=255) aCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAaga > 1:1189814/1‑139 (MQ=255) aCTAATCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCGTCCggg > 1:869490/1‑93 (MQ=255) | AATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTTAGGTTAAAAGACATCAGTTGAATAAACATTCA‑CAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGA > NC_000913/2089911‑2090180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |