| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,328,103 | A→C | intergenic (+20/+136) | yhbY → / ← greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,328,103 | 0 | A | C | 100.0% | 106.7 / NA | 30 | intergenic (+20/+136) | yhbY/greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (13/17); total (13/17) | |||||||||||
CCTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CACATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTA > NC_000913/3327968‑3328234 | ccTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCAt < 1:1211907/139‑1 (MQ=255)ccTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCAt < 1:887292/139‑1 (MQ=255) cgcgAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGATAAGATTAACCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGttt > 2:359159/1‑139 (MQ=255) aCCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCgct < 1:772453/139‑2 (MQ=255) gcgcCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCCATTTGCTGTGTAAAACGAGGGGTTTTCCgcaggc < 2:1161294/139‑1 (MQ=255) ggTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCa < 2:959007/139‑1 (MQ=255) gTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTg < 1:285358/92‑1 (MQ=255) gTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTg > 2:285358/1‑92 (MQ=255) gTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCAc > 2:724157/1‑139 (MQ=255) gTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCAc > 2:1157721/1‑139 (MQ=255) cGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGctct > 2:978145/1‑139 (MQ=255) aaaaCGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTc < 2:998972/139‑1 (MQ=255) aaCGCTGGTGCTTTATCGCGCAACTAAAGAACGTAAAATCGCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCAGTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGt < 2:1278200/139‑1 (MQ=255) cTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGAt > 2:131520/1‑139 (MQ=255) cccAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAg > 2:61203/1‑139 (MQ=255) cAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAGAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCa < 2:201618/99‑1 (MQ=255) cAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAGAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCa > 1:201618/1‑99 (MQ=255) aaGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCttt < 1:1157721/139‑1 (MQ=255) cGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCct < 1:978145/139‑1 (MQ=255) cGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCct < 1:61203/139‑1 (MQ=255) tAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCcttt > 2:306289/1‑139 (MQ=255) aaaaTCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCctttc > 1:318393/1‑139 (MQ=255) cGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACaa < 1:306289/139‑1 (MQ=255) tGCCACGCTAAGATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATAc > 1:73966/1‑139 (MQ=255) gATTATCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCtt < 2:318393/139‑1 (MQ=255) tCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTa > 2:1165230/1‑139 (MQ=255) tCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTa < 1:724157/139‑1 (MQ=255) tCCTAAAGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTa < 1:1165230/139‑1 (MQ=255) aGTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGt > 1:1215276/1‑139 (MQ=255) gTTACA‑CCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTa < 2:1215276/139‑1 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGctc < 2:571478/62‑1 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGctc > 1:571478/1‑62 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCttttt > 2:428649/1‑97 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCttttt < 1:428649/97‑1 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCct < 1:662744/100‑1 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCct > 2:47685/1‑100 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCct > 2:662744/1‑100 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCct < 1:47685/100‑1 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACaa < 1:971980/110‑1 (MQ=255) aca‑cccATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACaa > 2:971980/1‑110 (MQ=255) ca‑cccaTTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGcc < 2:249876/91‑1 (MQ=255) ca‑cccaTTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGt < 2:566865/134‑1 (MQ=255) | CCTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACA‑CACATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTA > NC_000913/3327968‑3328234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |