| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,819,488 | C→T | H205H (CAC→CAT) *561* (TAG→TAA) |
yicG → ligB ← |
UPF0126 family inner membrane protein DNA ligase, NAD(+)‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,819,488 | 0 | C | T | 100.0% | 166.0 / NA | 52 | H205H (CAC→CAT) *561* (TAG→TAA) | yicG ligB | UPF0126 family inner membrane protein DNA ligase, NAD(+)‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (30/22); total (30/22) | |||||||||||
CGCGCTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAA > NC_000913/3819356‑3819616 | cgcgCTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTAGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGt > 1:48365/1‑139 (MQ=255) cgcTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTc > 1:594162/1‑139 (MQ=255) cgcTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTc > 1:66568/1‑139 (MQ=255) cTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCaa < 1:654313/139‑1 (MQ=255) cTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATctgctg > 1:436807/1‑139 (MQ=255) aCCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGc < 2:66568/139‑1 (MQ=255) aCCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGc > 2:418306/1‑139 (MQ=255) aCCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGc > 2:264086/1‑139 (MQ=255) tgatgTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGcagcc > 1:678995/1‑139 (MQ=255) gatgTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGcagcca > 1:26618/1‑139 (MQ=255) tAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAAc > 1:593908/1‑139 (MQ=255) tATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGccc > 2:468825/1‑139 (MQ=255) aTCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTTCCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCa < 2:553494/139‑1 (MQ=255) ctcCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGc > 2:8701/1‑139 (MQ=255) cACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGcttc > 2:453520/1‑139 (MQ=255) cccTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGcttctt < 2:115733/139‑1 (MQ=255) ccTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTg > 2:393518/1‑139 (MQ=255) cGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCa > 2:263107/1‑139 (MQ=255) ggCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCAt > 2:116099/1‑139 (MQ=255) gCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttccttcc < 1:8701/139‑1 (MQ=255) gCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttccttcc < 1:307859/139‑1 (MQ=255) cGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGcagcca < 2:137217/97‑1 (MQ=255) cGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGcagcca > 1:137217/1‑97 (MQ=255) cGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAtt > 2:561510/1‑139 (MQ=255) cTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCATCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCa < 2:48365/139‑1 (MQ=255) cTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCa < 1:393518/139‑1 (MQ=255) tGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAc < 1:468825/139‑1 (MQ=255) aGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGcc > 2:200894/1‑85 (MQ=255) aGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGcc < 1:200894/85‑1 (MQ=255) aGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTcc > 1:458009/1‑139 (MQ=255) gATTACCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATcc > 1:472101/1‑139 (MQ=255) aCCGGTCTTTTACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc > 2:511059/1‑139 (MQ=255) ttttACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCagccagcc > 1:73096/1‑61 (MQ=255) ttttACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCagccagcc < 2:73096/61‑1 (MQ=255) ttACTACAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgc < 1:116099/139‑1 (MQ=255) tactacAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgct < 2:472101/139‑1 (MQ=255) tactacAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGACAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgct < 1:561510/139‑1 (MQ=255) ctacAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgctgc < 1:418306/139‑1 (MQ=255) cAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc > 1:272240/1‑139 (MQ=255) cAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc < 1:170871/139‑1 (MQ=255) cAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc < 2:594162/139‑1 (MQ=255) cAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc > 2:563918/1‑139 (MQ=255) cAGCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc < 1:264086/139‑1 (MQ=255) gCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGcagcca < 1:346336/48‑1 (MQ=255) gCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGcagcca > 2:346336/1‑48 (MQ=255) gCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa > 2:384850/1‑96 (MQ=255) gCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa < 1:384850/96‑1 (MQ=255) gCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcg < 1:597819/107‑1 (MQ=255) gCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcg > 2:597819/1‑107 (MQ=255) gCCACGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCa > 1:561588/1‑139 (MQ=255) aCGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGaa > 1:220113/1‑139 (MQ=255) aCGAA‑GGACATTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGaa > 2:671534/1‑139 (MQ=255) | CGCGCTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAA‑GGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAA > NC_000913/3819356‑3819616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |