| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,709,561 | (C)6→7 | coding (915/1692 nt) | eptB ← | KDO phosphoethanolamine transferase, Ca(2+)‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,709,555 | 1 | . | C | 97.6% | 281.8 / ‑0.8 | 82 | coding (921/1692 nt) | eptB | KDO phosphoethanolamine transferase, Ca(2+)‑inducible |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (38/42); total (39/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑C‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATACCCA > NC_000913/3709417‑3709688 | aGCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCcgcg < 2:404000/139‑1 (MQ=255) gCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCgcg‑c > 2:87294/1‑139 (MQ=255) gCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCgcg‑c < 1:142720/139‑1 (MQ=255) gCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCgcg‑c < 2:653594/139‑1 (MQ=255) gCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTACATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCgcg‑c < 2:90535/139‑1 (MQ=255) gCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATCTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCgcg‑c < 2:441063/139‑1 (MQ=255) gttttCCCCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTTAATCCTAACTGCTTCACAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc < 2:642141/139‑1 (MQ=255) gttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc > 2:710282/1‑139 (MQ=255) gttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc > 2:104772/1‑139 (MQ=255) ttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc < 2:332033/139‑2 (MQ=255) ttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc < 2:176574/139‑2 (MQ=255) ttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc < 2:546084/139‑2 (MQ=255) ttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc < 1:371851/139‑2 (MQ=255) ttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc > 1:17907/1‑138 (MQ=255) gtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg < 2:830385/139‑4 (MQ=255) cGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACg > 1:397085/1‑139 (MQ=255) tCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGCACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaa < 1:489408/139‑1 (MQ=255) tCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaa < 2:152577/139‑1 (MQ=255) cGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaaa > 1:868290/1‑139 (MQ=255) tGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGc < 2:739841/139‑1 (MQ=255) tGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGc < 2:301584/139‑1 (MQ=255) tAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc < 1:938402/118‑2 (MQ=255) tAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc > 2:938402/1‑117 (MQ=255) tAGAACCACATTTCGCTCTGCATAGCGTAAAGGTCAGAACTGAATCCTAACTGCTTCCGAACCGAGAAAATGTTCTGTTCTTCTGATGTGCGCTGCGGTTTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGc > 2:453680/1‑139 (MQ=255) ccACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTga > 2:3666/1‑139 (MQ=255) caTTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGagag > 1:421255/1‑139 (MQ=255) tttCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGtt > 1:764494/1‑139 (MQ=255) cGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTgg > 2:608685/1‑139 (MQ=255) ctctGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGtt > 2:684121/1‑139 (MQ=255) ctGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGTAACGCAGTGAGAGTTTGGTTGc < 2:17907/139‑1 (MQ=255) ctGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGc < 2:979000/139‑1 (MQ=255) gCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCTGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCgg > 2:233081/1‑139 (MQ=255) gCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCgg < 1:547575/139‑1 (MQ=255) gCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCACTAAAATGTCCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCTGTGAGAGTTTGGTTGCgg < 2:585929/139‑1 (MQ=255) gCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATca < 1:87294/139‑1 (MQ=255) cGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATcac < 1:3666/139‑1 (MQ=255) cgagaaGTCAGTACCGAATCCTAACTGGTTCCGAACCGACAAAATGTTTTGTTCTTTTAATGTGCTCCTCCGATTTTCTTCCCCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATcaca < 2:201119/137‑1 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATTTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAg > 1:989396/1‑139 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCgg < 1:538078/128‑1 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAg > 1:170508/1‑139 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGAGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAg > 2:667940/1‑139 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAAGGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAATGAGAGTTTGGTTGCGGTATCAgaggag > 2:152515/1‑139 (MQ=255) ggTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGt < 2:501156/139‑1 (MQ=255) ggTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGt < 1:104772/139‑1 (MQ=255) cAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTGCCGCG‑c‑cccccctg > 2:583172/1‑83 (MQ=255) cAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTGCCGCG‑c‑cccccctg < 1:583172/86‑4 (MQ=255) aGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAAcc > 2:1045311/1‑139 (MQ=255) aGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑CACCCCCTGACTTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATcac < 2:650411/129‑1 (MQ=255) aGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTATTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑CACCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCTGTATcac > 1:650411/1‑129 (MQ=255) aaCTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCAc > 2:886600/1‑139 (MQ=255) aaTCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCTGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAAc > 2:695049/1‑139 (MQ=255) aaTCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAAc > 2:183803/1‑139 (MQ=255) aaTCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAAc > 2:111271/1‑139 (MQ=255) aaTCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTACGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACAGAAc > 1:190250/1‑139 (MQ=255) tAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACAt > 1:464508/1‑85 (MQ=255) tAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACAt < 2:464508/85‑1 (MQ=255) aCTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGc > 1:1036284/1‑107 (MQ=255) aCTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGc < 2:1036284/107‑1 (MQ=255) aCTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCa < 2:868290/139‑1 (MQ=255) gCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGAt > 2:532629/1‑139 (MQ=255) cTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGt < 1:651072/95‑1 (MQ=255) cTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGt > 2:651072/1‑95 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAgg < 2:404727/103‑1 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAgg > 1:404727/1‑103 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTggg > 1:886530/1‑139 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTggg > 2:874136/1‑139 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTggg > 1:133757/1‑139 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTggg > 1:898394/1‑139 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctga > 1:589923/1‑53 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctga < 2:589923/57‑5 (MQ=255) gAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGc < 2:816977/139‑1 (MQ=255) tctgttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCg < 1:684121/139‑1 (MQ=255) gttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg < 2:873135/139‑1 (MQ=255) gttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg < 1:1028854/139‑1 (MQ=255) gttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg < 1:886600/139‑1 (MQ=255) gttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg < 2:397085/139‑1 (MQ=255) ttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCaa > 2:681932/1‑59 (MQ=255) ttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCaa < 1:681932/59‑1 (MQ=255) ttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGt < 2:53857/139‑1 (MQ=255) ttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGt > 1:496455/1‑139 (MQ=255) tctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTg < 1:137542/139‑1 (MQ=255) gtgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTg < 1:963731/68‑1 (MQ=255) gtgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTg > 2:963731/1‑68 (MQ=255) tgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCt < 1:390174/139‑1 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCa > 2:731829/1‑139 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCa > 2:690610/1‑139 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCa > 1:41468/1‑139 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCa > 2:1006359/1‑139 (MQ=255) cTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg > 2:798787/1‑123 (MQ=255) cTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg < 1:798787/123‑1 (MQ=255) gATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGa < 2:764494/139‑1 (MQ=255) aTTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCgg > 2:569064/1‑60 (MQ=255) aTTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCgg < 1:569064/60‑1 (MQ=255) aTTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGaa < 2:293819/139‑1 (MQ=255) aTTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGaa < 1:233081/139‑1 (MQ=255) cTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATAc < 2:898394/139‑1 (MQ=255) cTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATAc < 1:690610/139‑1 (MQ=255) cTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATAc < 1:731829/139‑1 (MQ=255) ttCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATAcc < 2:133757/139‑1 (MQ=255) ccGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATACCCa < 1:241937/139‑1 (MQ=255) | AGCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑C‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATACCCA > NC_000913/3709417‑3709688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |