| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 380,022 | (G)10→11 | intergenic (‑141/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,012 | 1 | . | G | 83.6% | 174.9 / 27.6 | 61 | intergenic (‑131/+57) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (7/3); new base G (34/17); total (41/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.34e-01 | |||||||||||
GGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAC > NC_000913/379877‑380135 | ggCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggg > 2:739071/1‑139 (MQ=255) aaaagacagatatACAAAAGGGGGGTATTCTATATGTCAATGCATGCGCCCCTATAATAAAGAATGGTGGAAAAGAAAATTTATCCGGTGAATGTGGAAGGAAAAAAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAgg < 2:927111/130‑1 (MQ=255) catgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGGCGGCTAATCGGCAGGGaa > 2:175402/1‑139 (MQ=255) atgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAg > 2:765269/1‑139 (MQ=255) aCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCgg > 1:214679/1‑139 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAGGGGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 2:743475/1‑139 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAg > 2:330205/1‑139 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAgg < 1:5836/124‑1 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAgg > 2:5836/1‑124 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg > 1:276076/1‑139 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGGCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGcccctgttcttt > 1:927111/1‑131 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 2:1014513/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 2:512181/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 2:550516/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCAAATGGGAAGGGAAGGCCGCCCCGGATAggggg > 1:442609/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑ggg‑gggcta < 2:881709/108‑5 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑ggg‑gggcta > 1:881709/1‑104 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑g < 2:563338/100‑1 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑g > 1:563338/1‑100 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 2:921645/1‑139 (MQ=255) ttCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAACGGGGGGCa > 1:1010819/1‑139 (MQ=255) tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAgg > 1:885935/1‑139 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt > 2:979924/1‑139 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAACCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 1:743864/1‑139 (MQ=255) aTGCATACCCCCCTATAGAAAAAAACCCTGGGGAAAAAAATTTTTCCGGGGAAGGGGGTCGGAAAAAAAAGG‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa < 2:1010819/139‑1 (MQ=255) tGCTTACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGaa > 1:717316/1‑139 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGaa > 2:444360/1‑139 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCAAACGGGAAGGGAAGGCCCCCCCGGATGGGGGGCGGCAGAAGGAATCAGaa > 2:1033538/1‑139 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑g > 1:1001535/1‑82 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑g < 2:1001535/82‑1 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 1:568721/1‑139 (MQ=255) tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGGCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTc < 1:739071/139‑1 (MQ=255) taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc < 2:628346/139‑1 (MQ=255) atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt < 2:214679/139‑1 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 1:873065/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 1:76900/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 1:343459/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 2:12370/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCAGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGGGGCAGAAGGAATAAGAATTTCAGGGTAAGACGGCCt > 2:787311/1‑139 (MQ=255) aaaCACTGGAGAATAAAATTTAACCCGTGGATGGGGGTAAAAAACAAAAAGGGAAG‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 1:787311/138‑1 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa > 2:818029/1‑139 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa > 2:106965/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAGGGGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGGGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa > 1:202488/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAg > 2:356264/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAg > 2:131567/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑ggg‑gggctaa > 1:834553/1‑62 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑ggg‑gggctaa < 2:834553/67‑6 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAGGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 2:957161/1‑139 (MQ=255) acTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGCCGGGCTGCAAGt > 1:773999/1‑139 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 2:312139/1‑139 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑gg > 2:149321/1‑56 (MQ=255) tGGAGAATAAAATTTATCCGGGGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑ggggg‑gg < 1:149321/56‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCGGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 2:365950/1‑139 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:1026000/1‑139 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:198232/1‑139 (MQ=255) gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGG‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa < 1:765269/139‑1 (MQ=255) gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa < 1:550516/139‑1 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAAt > 2:872759/1‑58 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAAt < 1:872759/58‑1 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt > 2:1008209/1‑100 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAAAAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt < 1:1008209/100‑1 (MQ=255) tttATCCGGTGAATGTGGTCGGAAAACAACGA‑GGAAAG‑GGGGG‑GGG‑GGCTCATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTAAACCGGGCTGCAAGTTGCAGGCCGTTaaa > 1:1027922/1‑139 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa > 1:271820/1‑110 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa < 2:271820/110‑1 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatc < 1:12370/139‑1 (MQ=255) tgtgGGCGGAAAACAAAGG‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 1:1033538/139‑1 (MQ=255) gtgGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 1:131567/139‑1 (MQ=255) gtgGTCGGAAAACAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 1:979924/139‑1 (MQ=255) ggTCCGAAAAGATAGA‑GGGAG‑‑GGGGGTTGG‑TGCTAATCGGCAGGTGAGGCCACCACAGATATCCGGCGGCATAAGTAAACATAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCTTTAAAAGCATCGGTTGGGgtg < 2:1027922/139‑1 (MQ=255) tCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTcc > 2:589130/1‑86 (MQ=255) tCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTcc < 1:589130/86‑1 (MQ=255) ggAAAACAAAGA‑GGAAAGGGGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCg < 1:743475/139‑1 (MQ=255) gAAAACGAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCACGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 2:648412/1‑139 (MQ=255) aaaaCAAAGG‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 1:356264/139‑1 (MQ=255) aaaaCAAAGA‑GGAAAG‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGCCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 2:743864/139‑1 (MQ=255) | GGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGAAA‑‑GGGGG‑GGG‑GGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAC > NC_000913/379877‑380135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |