| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,325,247 | (T)5→4 | coding (502/1896 nt) | yciQ → | enhancer of membrane protein expression, putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,325,243 | 0 | T | . | 100.0% | 115.6 / NA | 27 | coding (498/1896 nt) | yciQ | enhancer of membrane protein expression, putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (13/14); total (13/14) | |||||||||||
TGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGTTTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTT > NC_000913/1325113‑1325342 | tGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTtctctc < 1:203806/139‑1 (MQ=255) aGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTtct > 1:73922/1‑139 (MQ=255) tCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg > 1:270333/1‑120 (MQ=255) tCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg < 2:270333/120‑1 (MQ=255) aTTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCAttt > 2:205280/1‑139 (MQ=255) tATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAatat > 2:703525/1‑121 (MQ=255) tATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAatat < 1:703525/121‑1 (MQ=255) aaaaaTGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGa > 1:220557/1‑139 (MQ=255) gCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCtttt < 1:205280/139‑1 (MQ=255) ttCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTAc < 1:426483/139‑1 (MQ=255) tGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg > 2:229256/1‑84 (MQ=255) tGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg < 1:229256/84‑1 (MQ=255) gggggATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAgg > 2:797040/1‑139 (MQ=255) ggATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCg < 1:797040/139‑1 (MQ=255) aTTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGac < 2:228278/139‑1 (MQ=255) gATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACata < 2:220557/139‑1 (MQ=255) aTCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCa > 2:842055/1‑61 (MQ=255) aTCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCa < 1:842055/61‑1 (MQ=255) aCGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGac < 2:268624/118‑1 (MQ=255) aCGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGac > 1:268624/1‑118 (MQ=255) tGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCtt > 2:339002/1‑139 (MQ=255) cTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTa < 2:185815/85‑1 (MQ=255) cTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTa > 1:185815/1‑85 (MQ=255) ccGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg > 1:58174/1‑35 (MQ=255) ccGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg < 2:58174/35‑1 (MQ=255) ttGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACat > 2:283564/1‑98 (MQ=255) ttGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACat < 1:283564/98‑1 (MQ=255) | TGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGTTTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTT > NC_000913/1325113‑1325342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |