| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,325,247 | (T)5→4 | coding (502/1896 nt) | yciQ → | enhancer of membrane protein expression, putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,325,243 | 0 | T | . | 100.0% | 167.8 / NA | 40 | coding (498/1896 nt) | yciQ | enhancer of membrane protein expression, putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (18/22); total (18/22) | |||||||||||
TTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGTTTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCG > NC_000913/1325108‑1325367 | tttCTTGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGtttt < 2:279605/139‑1 (MQ=255) tGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTtctctc < 1:898178/139‑1 (MQ=255) tGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTtctctc < 2:439852/139‑1 (MQ=255) cTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg < 2:246057/139‑1 (MQ=255) cTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg < 2:153159/139‑1 (MQ=255) tCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGt > 1:293978/1‑139 (MQ=255) tCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTg < 2:487437/139‑1 (MQ=255) tCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTg < 2:930217/139‑1 (MQ=255) aTTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg > 1:911347/1‑124 (MQ=255) aTTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAg < 2:911347/124‑1 (MQ=255) tCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGt > 2:559820/1‑109 (MQ=255) tCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGt < 1:559820/109‑1 (MQ=255) aTTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTtctctc > 2:674465/1‑109 (MQ=255) aTTATCAGGTTAAAAATGCTTGCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTtctctc < 1:674465/109‑1 (MQ=255) aTCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGc < 2:422362/139‑1 (MQ=255) ggTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGaaa > 1:813053/1‑139 (MQ=255) gTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAAt > 1:923312/1‑139 (MQ=255) tGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGga < 2:813053/139‑1 (MQ=255) gCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCg < 2:185210/124‑1 (MQ=255) gCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCg > 1:185210/1‑124 (MQ=255) tGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTtctctc < 2:514426/81‑1 (MQ=255) tGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTtctctc > 1:514426/1‑81 (MQ=255) aGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGagaa < 2:20704/136‑1 (MQ=255) aGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGagaa > 1:20704/1‑136 (MQ=255) gggATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGc < 1:158013/139‑1 (MQ=255) aTTCTGATCTGCTAGTCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGac < 1:327519/139‑1 (MQ=255) aTTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACGCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGac > 1:652946/1‑139 (MQ=255) aTTATGATCTGCTAATCTGGAACGTTACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGac < 2:652946/139‑1 (MQ=255) ttCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGaca < 2:923312/139‑1 (MQ=255) cTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTctct < 2:49354/71‑1 (MQ=255) cTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTctct > 1:49354/1‑71 (MQ=255) cTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTaa > 2:754002/1‑139 (MQ=255) aTCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATgg > 1:315212/1‑139 (MQ=255) gAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCa > 2:956027/1‑139 (MQ=255) tGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGagaaga > 1:820735/1‑108 (MQ=255) tGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGagaaga < 2:820735/108‑1 (MQ=255) aCCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGa < 2:925546/112‑1 (MQ=255) aCCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGa > 1:925546/1‑112 (MQ=255) aCCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTTGa > 2:914234/1‑139 (MQ=255) tAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAgg > 1:332085/1‑103 (MQ=255) tAACCACTGGCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAgg < 2:332085/103‑1 (MQ=255) gCCGTTTGAAATTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTACTATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTTGAGGACGGACGAATTg > 1:462080/1‑139 (MQ=255) aaTTTATAAGACCCG‑TTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCcgcg < 2:315212/139‑1 (MQ=255) | TTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGTTTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCG > NC_000913/1325108‑1325367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |