Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,208,534	Δ1 bp	coding (403/414 nt);coding (586/603 nt)	tfaP → tfaE ←	e14 prophage, uncharacterized protein e14 prophage, putative tail fiber assembly protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,208,534	0	C	.	100.0%	259.8 / NA	67	coding (403/414 nt) coding (586/603 nt)	tfaP tfaE	e14 prophage, uncharacterized protein e14 prophage, putative tail fiber assembly protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (37/30);  total (37/30)

AGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAGTTGAATCAGA  >  NC_000913/1208403‑1208667                                                                                                                                    |                                                                                                                                        aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGa                                                                                                                                 <  1:180738/139‑1 (MQ=255)  ggCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑t                                                                                                                               <  2:737444/139‑1 (MQ=255)         ttGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATcc                                                                                                                        >  2:875960/1‑139 (MQ=255)             gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcg                                                                                                                    <  1:875960/139‑1 (MQ=255)             gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcg                                                                                                                    <  1:488599/139‑1 (MQ=255)               aGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGcgcg                                                                                                                  <  2:791927/139‑1 (MQ=255)                 aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGt                                                                                                                >  2:384997/1‑139 (MQ=255)                           gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCt                                                                                                      >  2:560084/1‑139 (MQ=255)                           gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGAGATTGAATTGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCt                                                                                                      >  1:930492/1‑139 (MQ=17)                             tGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGt                                                                                                                >  1:1080665/1‑127 (MQ=255)                             tGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGt                                                                                                                <  2:1080665/127‑1 (MQ=255)                             tGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGt                                                                                                    >  2:1384260/1‑139 (MQ=255)                             tGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGt                                                                                                    >  1:1426149/1‑139 (MQ=255)                                   gAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGt                                                                                              >  2:664911/1‑139 (MQ=255)                                           ataATTTGTGGCTGGATTACCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTg                                                                                                               <  1:1060167/114‑1 (MQ=255)                                           ataATTTGTGGCTGGATTACCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTg                                                                                                               >  2:1060167/1‑114 (MQ=255)                                              aTTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTAt                                                                                                        <  2:1448355/118‑1 (MQ=255)                                              aTTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTAt                                                                                                        >  1:1448355/1‑118 (MQ=255)                                              aTTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCaa                                                                                   <  1:651652/139‑1 (MQ=255)                                               tttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAAt                                                                                  >  1:1436816/1‑139 (MQ=255)                                               tttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAAt                                                                                  >  1:747557/1‑139 (MQ=255)                                                 tgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATc                                                                                                                         <  1:1367189/98‑1 (MQ=255)                                                 tgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATc                                                                                                                         >  2:1367189/1‑98 (MQ=255)                                                  gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcg                                                                                                                    >  2:997210/1‑102 (MQ=255)                                                  gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcg                                                                                                                    <  1:997210/102‑1 (MQ=255)                                                   tgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTaa                                                                              <  1:988216/139‑1 (MQ=255)                                                    ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATATATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAAt                                                                             >  2:738043/1‑139 (MQ=255)                                                         gATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg                                                                                 <  1:1371366/130‑1 (MQ=255)                                                         gATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg                                                                                 >  2:1371366/1‑130 (MQ=255)                                                          aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca                                                                       <  2:1436816/139‑1 (MQ=255)                                                          aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca                                                                       <  2:747557/139‑1 (MQ=255)                                                           ataagagacaGCACAGGAACTGGTTGATACATCCAGTGCGCCAGATATTGACTGGGTTACGCCTCCGGCAGGT‑AGGCCAGA‑TGACATCCCGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac                                                                      <  1:300815/130‑1 (MQ=14)                                                                  gAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTa                                                               >  1:888341/1‑139 (MQ=255)                                                                   aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa                                                              >  1:417867/1‑139 (MQ=255)                                                                     gCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGt                                                            >  1:756121/1‑139 (MQ=255)                                                                        cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg                                                         >  1:250513/1‑139 (MQ=255)                                                                               tGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGttt                                                  >  1:903697/1‑139 (MQ=255)                                                                                 gTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcgc                                                                                                                   >  2:713058/1‑72 (MQ=14)                                                                                 gTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcgc                                                                                                                   <  1:713058/72‑1 (MQ=14)                                                                                 gTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGttctgtctcttat                                                >  2:300815/1‑127 (MQ=14)                                                                                    gATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcc                                             <  2:1181586/139‑1 (MQ=255)                                                                                     aTACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTa                                                                               >  2:586863/1‑104 (MQ=255)                                                                                     aTACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTa                                                                               <  1:586863/104‑1 (MQ=255)                                                                                     aTACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcct                                            >  2:296508/1‑139 (MQ=255)                                                                                         aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                                        >  1:50264/1‑139 (MQ=255)                                                                                         aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                                        <  1:384997/139‑1 (MQ=255)                                                                                         aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                                        <  1:738043/139‑1 (MQ=255)                                                                                           ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc                                                                        >  1:74128/1‑105 (MQ=255)                                                                                           ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc                                                                        <  2:74128/105‑1 (MQ=255)                                                                                           ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCa                                      >  2:1057043/1‑139 (MQ=255)                                                                                              gTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGtt                                   <  1:664911/139‑1 (MQ=255)                                                                                               tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt                                                                                      <  1:1176085/87‑1 (MQ=11)                                                                                               tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt                                                                                      >  2:1176085/1‑87 (MQ=11)                                                                                               tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt                                  >  1:1235379/1‑139 (MQ=255)                                                                                               tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCAGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt                                  >  2:1406552/1‑139 (MQ=255)                                                                                                 cgcCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTAc                                >  2:644365/1‑139 (MQ=255)                                                                                                                 gcttACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAAttt               >  1:724847/4‑139 (MQ=255)                                                                                                                  cttACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcg                                                                                                                    >  1:862068/3‑38 (MQ=14)                                                                                                                  cttACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGgcg                                                                                                                    <  2:862068/36‑1 (MQ=14)                                                                                                                  cttACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTc              >  2:857179/3‑139 (MQ=255)                                                                                                                    tACGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCTCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAg            <  1:1057043/139‑1 (MQ=255)                                                                                                                    tACCCCTCCCGCAGTT‑AGGCCAGATTGCCATCCGGC‑CGGTTGTGGTAACTTTTTCCCGCACCGGCTTCATGTAAACCAGCCCAGCCTTTAGGTTTGTTTTTTCTGCCCTCGTCAGGTTACGTCCGGCCTG‑CAATTTCAg            <  1:884682/139‑1 (MQ=255)                                                                                                                     aCGCCTCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAGt           <  2:888341/139‑1 (MQ=255)                                                                                                                          tCCGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAGTTGAAt      <  1:1406552/139‑1 (MQ=255)                                                                                                                           ccGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAGTTGAATc     >  1:1352697/1‑139 (MQ=255)                                                                                                                            cGGCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTA‑GTCCGGGCTGCCAATTTAGGTTGAAtaa    >  2:884682/1‑137 (MQ=18)                                                                                                                              gCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAGTTGAATCAGa  <  1:296508/139‑1 (MQ=255)                                                                                                                              gCAGTT‑AGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAGTTGAATCAGa  <  2:1426149/139‑1 (MQ=255)                                                                                                                                    |                                                                                                                                        AGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGA‑TGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTG‑CAATTTCAGTTGAATCAGA  >  NC_000913/1208403‑1208667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑