| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,980,957 | (G)6→7 | coding (71/1386 nt) | yifK → | putative APC family amino acid transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,980,951 | 1 | . | G | 98.9% | 332.1 / ‑3.8 | 93 | coding (65/1386 nt) | yifK | putative APC family amino acid transporter |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (50/42); total (51/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.49e-01 | |||||||||||
TTGCAACACTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCT‑GGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAAT > NC_000913/3980816‑3981083 | ttGCAACACTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCT‑ggg < 2:833755/139‑1 (MQ=255) cTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCT‑gggg‑gggcacc > 1:1415948/1‑134 (MQ=255) gATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCAtt > 2:620733/1‑139 (MQ=255) aTAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGc < 1:1882277/139‑1 (MQ=255) aTAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGc < 1:282079/139‑1 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGcc > 2:1026879/1‑139 (MQ=255) aaCGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCt > 1:1745699/1‑139 (MQ=255) aCGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTg > 2:1773519/1‑139 (MQ=255) aCGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTg > 2:207200/1‑139 (MQ=255) tAACCGGTAACACCGGAAAGCATGCAAACACAACACGATGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTa > 1:113170/1‑139 (MQ=255) tAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCAt > 2:713554/1‑122 (MQ=255) tAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCAt < 1:713554/122‑1 (MQ=255) tAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTa > 2:1044389/1‑139 (MQ=255) tAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTa > 2:1875416/1‑139 (MQ=255) aaCCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTAt > 1:813615/1‑139 (MQ=255) aaCCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTAt > 2:762616/1‑139 (MQ=255) aaCCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTAt > 1:769146/1‑139 (MQ=255) tAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgc > 2:1659842/1‑139 (MQ=255) tAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgc > 2:1568825/1‑139 (MQ=255) aaCACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgcc > 2:1004853/1‑139 (MQ=255) cacCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgccgc < 2:465490/139‑1 (MQ=255) cacCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgccgc < 2:769146/139‑1 (MQ=255) acCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgccgcc > 2:1494390/1‑139 (MQ=255) ccGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCa < 1:1659842/139‑1 (MQ=255) ccGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCa < 1:207200/139‑1 (MQ=255) cATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTg > 2:958090/1‑139 (MQ=255) aTGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGa > 2:1723260/1‑139 (MQ=255) tGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGaa < 1:1773519/139‑1 (MQ=255) gCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTc < 2:1739795/106‑1 (MQ=255) gCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTc > 1:1739795/1‑106 (MQ=255) acacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccggg < 1:702663/139‑1 (MQ=255) cacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGcc > 2:1716399/1‑100 (MQ=255) cacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGcc < 1:1716399/100‑1 (MQ=255) cacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGaaa < 2:1863541/129‑1 (MQ=255) cacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGaaa > 1:1863541/1‑129 (MQ=255) cacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccgggc < 1:620733/139‑1 (MQ=255) gAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCAt > 2:1490649/1‑139 (MQ=255) gATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCg < 1:1026879/139‑1 (MQ=255) gATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCg < 1:762616/139‑1 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCgg > 2:1884435/1‑88 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCgg < 1:1884435/88‑1 (MQ=255) aTGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttg < 2:813615/139‑1 (MQ=255) ggCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgtt < 2:113170/139‑1 (MQ=255) ggCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgtt < 1:1494390/139‑1 (MQ=255) cAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGc < 2:1267235/84‑1 (MQ=255) cAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGc > 1:1267235/1‑84 (MQ=255) cAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTgg < 1:1723260/139‑1 (MQ=255) aGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGc > 2:1526373/1‑139 (MQ=255) aGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGc > 2:17078/1‑139 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGaaa < 2:1051890/112‑1 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGaaa > 1:1051890/1‑112 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttg < 2:1382820/133‑1 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttg > 1:1382820/1‑133 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGcc < 1:1093684/139‑1 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGcc > 2:1872826/1‑139 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCT‑gggg‑ggg < 2:1701222/66‑2 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCT‑gggg‑ggg > 1:1701222/1‑65 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGAGATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccgggcc < 2:1002473/122‑1 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGTCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccgggcc < 2:1230008/122‑1 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccgggcc > 1:1002473/1‑122 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttg > 2:1391733/1‑132 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttg < 1:1391733/132‑1 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCt > 1:1316500/1‑139 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCT‑GGGGTGGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccgggcc > 1:1230008/1‑122 (MQ=255) cAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTatat < 1:1526373/139‑1 (MQ=255) agCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCg > 2:730184/1‑139 (MQ=255) agCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCg > 2:977678/1‑139 (MQ=255) cTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCggg > 2:557996/1‑139 (MQ=255) cAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCAt < 2:1706905/54‑1 (MQ=255) cAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCAt > 1:1706905/1‑54 (MQ=255) cAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATgggg < 1:1756802/76‑1 (MQ=255) cAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATgggg > 2:1756802/1‑76 (MQ=255) aGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGACCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGt < 2:1278662/139‑1 (MQ=255) gCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCAt < 1:1019545/105‑1 (MQ=255) gCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCAt > 2:1019545/1‑105 (MQ=255) tGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCgg < 2:875666/58‑1 (MQ=255) tGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCgg > 1:875666/1‑58 (MQ=255) tGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTGTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGt > 2:996006/1‑139 (MQ=255) tGGGCTGGAAGCTCGACATATCGAACNCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGt > 1:887137/1‑139 (MQ=255) ggCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTgg < 2:1702448/112‑1 (MQ=255) ggCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTgg > 1:1702448/1‑112 (MQ=255) tGGAAGCTCGACATATCGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCtttt > 2:1287126/1‑139 (MQ=255) gAAGCTCGACATATCTAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTtc > 1:1257966/1‑139 (MQ=255) cGAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAAt < 2:1415948/139‑1 (MQ=255) gAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCggg < 1:402541/109‑1 (MQ=255) gAACTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCggg > 2:402541/1‑109 (MQ=255) aCTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTgg < 2:1141082/90‑1 (MQ=255) aCTCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTgg > 1:1141082/1‑90 (MQ=255) tCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCa > 1:981310/1‑52 (MQ=255) tCATCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCa < 2:981310/52‑1 (MQ=255) aTCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCg > 1:783389/1‑77 (MQ=255) aTCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCg < 2:783389/77‑1 (MQ=255) aTCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTa > 1:1354860/1‑79 (MQ=255) aTCGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTa < 2:1354860/79‑1 (MQ=255) cGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCa < 1:882365/48‑1 (MQ=255) cGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCa > 2:882365/1‑48 (MQ=255) cGCCCTGGGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAAt < 2:887137/139‑1 (MQ=255) | TTGCAACACTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCT‑GGGG‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAAT > NC_000913/3980816‑3981083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |