| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,475,562 | (G)6→7 | coding (126/1815 nt) | yjgL → | SopA‑central‑domain‑like hexapeptide repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,475,556 | 1 | . | G | 95.1% | 204.8 / 2.3 | 61 | coding (120/1815 nt) | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base G (30/28); total (31/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
AAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTC > NC_000913/4475425‑4475686 | aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg < 2:995276/139‑2 (MQ=255)aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg < 2:511227/139‑2 (MQ=255)aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCCGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑gggga > 1:897322/1‑138 (MQ=255) gAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑gggggcag > 1:1616710/1‑135 (MQ=255) ttCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGAt > 1:966721/1‑139 (MQ=255) accGTCATGAGCAACCAATCAGATTCAGATTATTCTCAACACATTACATTAGCCGACTTTTTTAAACAAAAAAGTGAAGTACTAACTGCCTTGCGTGTTGGAATGAATGATTTTGCCCGTATTACA‑‑GGTCGGG‑CAGGAt > 1:1588205/3‑139 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATaa > 2:858656/1‑139 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATaa > 2:792964/1‑139 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATaa > 2:1190853/1‑139 (MQ=255) gAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAg > 1:535630/1‑139 (MQ=255) gCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAg < 1:1065217/134‑1 (MQ=255) gCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAg > 2:1065217/1‑134 (MQ=255) gCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGa < 2:220831/139‑1 (MQ=255) gCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGa < 1:792964/139‑1 (MQ=255) aaaTTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑gggggca > 2:454295/1‑106 (MQ=255) aaaTTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑gggggca < 1:454295/109‑4 (MQ=255) attattCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAg < 2:966721/139‑1 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGa > 2:249982/1‑117 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGa < 1:249982/117‑1 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCAtt > 1:746478/1‑139 (MQ=255) cAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTa < 2:1616710/139‑1 (MQ=255) cttacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGAATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttt > 1:1177511/2‑139 (MQ=255) ttaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 2:535630/139‑1 (MQ=255) ttaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCCGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑GG‑GGGGACAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 2:897322/139‑1 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGGATTTTTAGAGttttt < 1:1255789/134‑1 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttttt > 2:1255789/1‑134 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAg > 1:778749/1‑139 (MQ=255) gACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGata > 1:1559918/1‑139 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAg < 2:641138/88‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAg > 1:641138/1‑88 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 1:496465/1‑133 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:496465/133‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat > 1:71359/1‑138 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 2:71359/138‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg > 2:1835146/1‑76 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg < 1:1835146/77‑2 (MQ=255) aaTTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGAATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATAttt < 2:1177511/139‑1 (MQ=255) aaaaGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg < 1:1570029/64‑2 (MQ=255) aaaaGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg > 2:1570029/1‑63 (MQ=255) aaaGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTAtg < 2:746478/139‑1 (MQ=255) aaGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGAtt < 1:1190853/139‑1 (MQ=255) aGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGAttt > 1:5700/1‑139 (MQ=255) ccTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 1:575241/1‑101 (MQ=255) ccTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:575241/101‑1 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTc > 1:1359104/1‑139 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg > 2:1636405/1‑43 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg < 1:1636405/44‑2 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTa > 2:1876265/1‑85 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTa < 1:1876265/85‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg > 1:865956/1‑41 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg > 2:364752/1‑41 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg < 2:865956/42‑2 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggggg < 1:364752/42‑2 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggg > 1:1031649/1‑40 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑gg‑ggg < 2:1031649/40‑1 (MQ=255) ttGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat > 1:416386/1‑97 (MQ=255) ttGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 2:416386/97‑1 (MQ=255) ttGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTAtg > 1:303162/1‑112 (MQ=255) ttGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTAtg < 2:303162/112‑1 (MQ=255) ttGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAg > 2:131945/1‑139 (MQ=255) ttGGAATGAATGATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAg > 1:1794451/1‑139 (MQ=255) ttGGAATGAATGATTCTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAg < 1:742209/139‑1 (MQ=255) aatgaatgATTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCggg < 1:131945/139‑1 (MQ=255) atgaatgaTTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAat < 1:267493/49‑1 (MQ=39) atgaatgaTTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAat > 2:267493/1‑49 (MQ=39) aatgaTTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 2:1795618/1‑84 (MQ=255) aatgaTTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 1:1795618/84‑1 (MQ=255) aatgaTTTTGCCCGTATTGCC‑‑GG‑GGGG‑CAGGATAACAGaa < 1:931064/40‑1 (MQ=255) aatgaTTTTGCCCGTATTGCC‑‑GG‑GGGG‑CAGGATAACAGaa > 2:931064/1‑40 (MQ=255) atgaTTTTGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGaa > 2:1383228/1‑139 (MQ=255) ttttGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAcc < 2:571904/89‑1 (MQ=255) ttttGCCCGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAcc > 1:571904/1‑89 (MQ=255) cccGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg < 1:1383228/139‑1 (MQ=255) ccGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGc < 2:778749/139‑1 (MQ=255) cGTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCt < 2:1559918/139‑1 (MQ=255) gTATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTc > 2:979964/1‑139 (MQ=255) tATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatg > 1:1759331/1‑131 (MQ=255) tATTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatg < 2:1759331/131‑1 (MQ=255) aTTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTa > 1:13221/1‑55 (MQ=255) aTTGCCG‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTa < 2:13221/55‑1 (MQ=255) | AAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCC‑‑GG‑GGGG‑CAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTC > NC_000913/4475425‑4475686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |