| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,920,950 | C→T | *80* (TAG→TAA) | atpE ← | F0 sector of membrane‑bound ATP synthase, subunit c |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,920,950 | 0 | C | T | 99.0% | 337.2 / NA | 102 | *80* (TAG→TAA) | atpE | F0 sector of membrane‑bound ATP synthase, subunit c |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (56/45); minor base A (0/1); total (56/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 102 total aligned reads displayed.
TCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCC > NC_000913/3920822‑3921082 | tCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAg < 1:331117/139‑1 (MQ=255) tGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGa > 2:1138981/1‑139 (MQ=255) gCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGaa > 2:47924/1‑139 (MQ=255) gaacagaacGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑At > 1:775275/1‑139 (MQ=255) gaacagaacGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑At < 2:775275/139‑1 (MQ=255) acgaacAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc < 1:1138981/139‑1 (MQ=255) gACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacccag > 2:934179/1‑139 (MQ=255) aCAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacccaga > 1:1353601/1‑139 (MQ=255) aCGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCg < 2:1415801/114‑1 (MQ=255) aCGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCg > 1:1415801/1‑114 (MQ=255) ggATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGa < 2:1594838/97‑1 (MQ=255) ggATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGa > 1:1594838/1‑97 (MQ=255) gttgCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATcc > 2:587469/1‑139 (MQ=255) cGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATccacca < 2:1353601/139‑1 (MQ=255) caGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGTGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGa > 1:1484114/1‑139 (MQ=255) aGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATccac < 1:1367141/124‑1 (MQ=255) aGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATccac > 2:1367141/1‑124 (MQ=255) gCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCAACCACCAGACCCATAACGATa < 2:366186/139‑1 (MQ=255) aaTGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATc < 2:1201393/75‑1 (MQ=255) aaTGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATc > 1:1201393/1‑75 (MQ=255) tGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGa < 1:1563062/107‑1 (MQ=255) tGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGa > 2:1563062/1‑107 (MQ=255) tGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAAc > 1:308746/1‑139 (MQ=255) tGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAAc > 2:448580/1‑139 (MQ=255) tGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAAAGCTTATTACGCGACAGCGAAC‑ATCATGTACAGACCCAGACCTAGAGCGAACAGCGGGATAGCATACACCAGACCCATAACGATAAAGaaa > 1:366186/1‑138 (MQ=255) ctctATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGa > 1:439425/1‑139 (MQ=255) ctATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGt > 2:442842/1‑139 (MQ=255) ctATTTAGTTAACGTTCTGATATTGCTCTTT‑AATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCa > 2:610230/1‑106 (MQ=255) ctATTTAGTTAACGTTCTGATATTGCTCTTT‑AATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCa < 1:610230/106‑1 (MQ=255) tttAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc < 1:531683/71‑1 (MQ=255) tttAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc > 2:531683/1‑71 (MQ=255) tttAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACg < 1:644379/139‑1 (MQ=255) tttAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACg < 1:587469/139‑1 (MQ=255) tAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgca > 2:831107/1‑139 (MQ=255) aGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcag > 1:1561525/1‑139 (MQ=255) gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑At < 1:1550219/60‑1 (MQ=255) gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑At > 2:1550219/1‑60 (MQ=255) ttAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGc > 2:284652/1‑98 (MQ=255) ttAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGc < 1:284652/98‑1 (MQ=255) ttAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca < 1:442842/139‑1 (MQ=255) ttAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca > 1:174025/1‑139 (MQ=255) ttAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca > 1:1733320/1‑139 (MQ=255) tAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGcagcag < 1:47924/139‑1 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc > 1:805581/1‑68 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc < 2:805581/68‑1 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACg < 2:1362219/114‑1 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACg > 1:1362219/1‑114 (MQ=255) cGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAgg < 1:831107/139‑1 (MQ=255) cTGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatc > 2:108204/1‑139 (MQ=255) tGATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatca > 1:1846946/1‑139 (MQ=255) gATATTGCTCTTTAATTAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc < 2:1145067/56‑1 (MQ=255) gATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc > 1:1145067/1‑56 (MQ=255) gATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgca > 1:452606/1‑126 (MQ=255) gATATTGCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgca < 2:452606/126‑1 (MQ=255) gCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGa > 2:384627/1‑78 (MQ=255) gCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGa < 1:384627/78‑1 (MQ=255) gCTCTTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTa > 1:981339/1‑116 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc > 2:1739036/1‑54 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc < 1:1739036/54‑1 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACGCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACt < 1:1244440/110‑1 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGGGATCATCGGGATAGCATcaac > 1:979868/1‑87 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATa > 1:1132834/1‑79 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCATCAGACCCATAACGATAAAGAACt > 2:1244440/1‑110 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGt > 1:1000633/1‑139 (MQ=255) ctctTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGt > 2:1293023/1‑139 (MQ=255) ctctTTAAATAAAAGCAACGCTTAATACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATccac < 2:979868/87‑1 (MQ=255) ctccTTAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATa < 2:1132834/79‑1 (MQ=255) ttAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCa > 2:951879/1‑78 (MQ=255) ttAAATAAAAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAc > 1:1136260/1‑139 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc > 2:1431251/1‑44 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc > 1:276022/1‑44 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc < 2:276022/44‑1 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAc < 1:1431251/44‑1 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCg < 1:1401489/62‑1 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCg > 2:1401489/1‑62 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa > 1:1542727/1‑93 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa < 2:1542727/93‑1 (MQ=255) taaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcg > 1:591662/1‑139 (MQ=255) aaataaaAGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcgc < 2:1846946/139‑1 (MQ=255) aaGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCg < 2:1603893/55‑1 (MQ=255) aaGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCg > 1:1603893/1‑55 (MQ=255) aaGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg < 2:1733320/139‑1 (MQ=255) aaGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg < 2:1136260/139‑1 (MQ=255) aGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc < 1:525690/41‑1 (MQ=255) aGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc > 2:525690/1‑41 (MQ=255) aGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGatcat < 1:1115310/59‑1 (MQ=255) aGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGatcat > 2:1115310/1‑59 (MQ=255) aGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa > 1:1701141/1‑85 (MQ=255) aGCAACGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa < 2:1701141/85‑1 (MQ=255) aCGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacccagac < 1:1679171/42‑1 (MQ=255) aCGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacccagac > 2:1679171/1‑42 (MQ=255) cGCTTATTACGCGACAGCGAACAATCACGTACAGACCCAGACCTACAGCGATCATCGGGa > 1:854883/1‑60 (MQ=255) cGCTTATTACGCGACAGCGAACAATCACGTACAGACCCAGACCTACAGCGATCATCGGGa < 2:854883/60‑1 (MQ=255) cGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc > 1:1830076/1‑36 (MQ=255) cGCTTATTACGCGACAGCGAAC‑ATCACGTAcagacc < 2:1830076/36‑1 (MQ=255) cGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCAt < 1:1448491/78‑1 (MQ=255) cGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCAt > 2:1448491/1‑78 (MQ=255) cGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa > 1:247385/1‑80 (MQ=255) cGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATaa < 2:247385/80‑1 (MQ=255) cGCTTATTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTcc > 2:969995/1‑139 (MQ=255) | TCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAAC‑ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCC > NC_000913/3920822‑3921082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |