| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,432,994 | (C)6→7 | coding (567/1125 nt) | smf ← | DNA recombination‑mediator A family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,432,988 | 1 | . | C | 98.8% | 278.8 / ‑3.9 | 81 | coding (573/1125 nt) | smf | DNA recombination‑mediator A family protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (35/45); total (36/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
CACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCG‑CCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGGCTGCTTTATGCG > NC_000913/3432856‑3433106 | cACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCG‑ccc‑c > 2:193383/1‑137 (MQ=255)cACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCG‑ccc‑c < 1:193383/137‑1 (MQ=255) aCCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAACTGTAAGCAAGGGGTGGAACATCGAGGGGAACTTCCGAGACGAGAGCG‑CCC‑CCACTGTTCAAg > 1:729356/1‑139 (MQ=255) cACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCa > 1:679772/1‑139 (MQ=255) aaaGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCa < 2:1285255/139‑1 (MQ=255) aaaGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCG‑CCCGCC‑CTGTTCAAGCAGACTGGCa > 2:317956/1‑139 (MQ=255) aGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGc > 2:846385/1‑139 (MQ=255) ccGCTT‑CACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAg < 2:396856/139‑1 (MQ=255) accaccaGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCa > 1:657058/1‑139 (MQ=255) aGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcgg > 1:544894/1‑139 (MQ=255) aGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcgg < 2:248095/139‑1 (MQ=255) tACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcggcg > 2:1180056/1‑139 (MQ=255) tACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcggcg < 2:647485/139‑1 (MQ=255) tACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcggcg < 1:273596/139‑1 (MQ=255) acCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg < 2:679772/139‑1 (MQ=255) ccTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGa > 1:1007958/1‑139 (MQ=255) cTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcgg < 2:600390/132‑1 (MQ=255) cTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGAcgg > 1:600390/1‑132 (MQ=255) cTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGAt < 2:935685/139‑1 (MQ=255) ttACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGa > 2:1245819/1‑139 (MQ=255) ttACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGa > 2:424024/1‑139 (MQ=255) ttACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATGGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGa > 2:432938/1‑139 (MQ=255) tACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGaa < 2:544894/139‑1 (MQ=255) tACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGaa < 2:939136/139‑1 (MQ=255) tACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGaa < 2:729356/139‑1 (MQ=255) aCTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt < 1:1245819/139‑1 (MQ=255) aCTTAGACCACCGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAAt < 1:846385/139‑1 (MQ=255) cTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATg < 2:657058/139‑1 (MQ=255) aCCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg > 1:445933/1‑127 (MQ=255) aCCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg < 2:445933/127‑1 (MQ=255) aCCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTAtt > 1:56659/1‑139 (MQ=255) cACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTaa < 1:1145058/139‑1 (MQ=255) cTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCG‑ccc‑cc‑cctg > 2:783537/1‑81 (MQ=255) cTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCG‑ccc‑cc‑cctg < 1:783537/84‑4 (MQ=255) tGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAg < 1:1210630/89‑1 (MQ=255) tGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAg > 2:1210630/1‑89 (MQ=255) tGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTc > 1:426355/1‑139 (MQ=255) aTAATGCGATTTCTTCGTTGGAAATTGTAAGCAAGGGGTTGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 2:1081247/139‑1 (MQ=255) aTAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 2:56659/139‑1 (MQ=255) aTAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 1:1138556/139‑1 (MQ=255) aTAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 2:1007958/139‑1 (MQ=255) aTTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa > 1:11028/1‑131 (MQ=255) aTTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 2:11028/131‑1 (MQ=255) aTTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCaa > 1:1072224/1‑139 (MQ=255) ttcttcGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCa < 2:352409/79‑1 (MQ=255) ttcttcGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCa > 1:352409/1‑79 (MQ=255) ttcttcGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGaa > 1:1231976/1‑115 (MQ=255) ttcttcGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGaa < 2:1231976/115‑1 (MQ=255) cttcGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGAc > 2:19854/1‑80 (MQ=255) cttcGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGAc < 1:19854/80‑1 (MQ=255) cttcGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACa > 1:1190073/1‑139 (MQ=255) cGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTccc < 1:755615/129‑1 (MQ=255) cGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTccc > 2:755615/1‑129 (MQ=255) aaTTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGa < 2:1190073/139‑1 (MQ=255) ttGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACg < 1:432938/139‑1 (MQ=255) gTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTc > 1:330105/1‑111 (MQ=255) gTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTc < 2:330105/111‑1 (MQ=255) gTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGcc < 2:426355/139‑1 (MQ=255) tAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTc > 1:925470/1‑110 (MQ=255) tAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTc < 2:925470/110‑1 (MQ=255) aGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCAtt < 2:416317/139‑1 (MQ=255) ggggTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg < 2:215333/86‑1 (MQ=255) ggggTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg > 1:215333/1‑86 (MQ=255) ggggTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCa < 2:1124618/132‑1 (MQ=255) ggggTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCa > 1:1124618/1‑132 (MQ=255) ggTGGAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGt > 1:1096926/1‑139 (MQ=255) gAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 1:484959/99‑1 (MQ=255) gAACATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa > 2:484959/1‑99 (MQ=255) aaCATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg > 1:541910/1‑79 (MQ=255) aaCATCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg < 2:541910/79‑1 (MQ=255) tCGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGgctgct > 1:844201/1‑139 (MQ=255) cGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg < 2:316121/74‑1 (MQ=255) cGAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCgggg > 1:316121/1‑74 (MQ=255) gAGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGTATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGGCTGCttt < 2:1096926/139‑1 (MQ=255) aGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGt > 1:326234/1‑55 (MQ=255) aGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGt < 2:326234/55‑1 (MQ=255) aGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGAt < 1:97447/74‑1 (MQ=255) aGGGGAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGAt > 2:97447/1‑74 (MQ=255) gggAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGAGTGGCAGCCAGTCGGGCATGACGGCGGGGATGTATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGGCTGCTTTATg < 2:773689/139‑1 (MQ=255) gAAATTCCGAGACGAGAGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGGCTGCTTTATgcg < 1:424024/139‑1 (MQ=255) gagacgagaGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCAttt < 1:328062/109‑1 (MQ=255) gagacgagaGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCAttt > 2:328062/1‑109 (MQ=255) gacgagaGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGt > 2:512166/1‑67 (MQ=255) gacgagaGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGt < 1:512166/67‑1 (MQ=255) gacgagaGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa < 1:1284739/77‑1 (MQ=255) gacgagaGCGCCCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCa > 2:1284739/1‑77 (MQ=255) | CACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAGACCACTGATAATGCGATTTCTTCGTGGGAAATTGTAAGCAAGGGGTGGAACATCGAGGGGAAATTCCGAGACGAGAGCG‑CCC‑CC‑CTGTTCAAGCAGACTGGCAGCCAGTCGGGCATGACGGCGGGGATGAATGGTATTAAGTCCATTCCCCAATACAGCAATGCTGACGCCATTTACCTGTAAGGCTGCTTTATGCG > NC_000913/3432856‑3433106 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |