| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,484,897 | (C)6→7 | coding (524/3594 nt) | evgS → | hybrid sensory histidine kinase in two‑component regulatory system with EvgA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,484,891 | 1 | . | C | 98.7% | 261.4 / ‑3.7 | 76 | coding (518/3594 nt) | evgS | hybrid sensory histidine kinase in two‑component regulatory system with EvgA |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (36/39); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
CGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑C‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACAT > NC_000913/2484756‑2485014 | cgccgcCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑cc > 1:125719/1‑139 (MQ=255) gccTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAAACACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑cccccc < 1:500419/139‑2 (MQ=255) aatGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTa < 1:719635/139‑1 (MQ=255) tGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTa < 2:958720/120‑1 (MQ=255) tGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTa > 1:958720/1‑120 (MQ=255) tGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAAt > 2:164992/1‑139 (MQ=255) cATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATtca > 2:1591758/1‑139 (MQ=255) cATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCACTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATtca > 2:1173241/1‑139 (MQ=255) ttGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c < 2:582462/116‑1 (MQ=255) ttGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c > 1:582462/1‑116 (MQ=255) ctgcAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCatcaat > 2:990471/1‑139 (MQ=255) accaaaccaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCAttt > 1:110218/1‑139 (MQ=255) accaaaccaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑ccccccaga < 1:230026/117‑5 (MQ=255) accaaaccaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑ccccccaga > 2:230026/1‑113 (MQ=255) caaaccaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTcc < 1:1593193/139‑1 (MQ=255) accaTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCaaa > 1:762017/1‑139 (MQ=255) aTTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGc < 2:125719/139‑1 (MQ=255) tGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGcaa > 1:371905/1‑139 (MQ=255) tGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTAACTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGcaa < 1:950885/139‑1 (MQ=255) gATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGcaac > 2:277371/1‑139 (MQ=255) tcaCCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTa > 1:225841/3‑139 (MQ=255) tACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAt > 2:1374980/1‑139 (MQ=255) tACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c < 2:1398695/91‑1 (MQ=255) tACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c > 1:1398695/1‑91 (MQ=255) aCCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTAtc < 1:1552264/139‑1 (MQ=255) ccTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGc > 2:684650/1‑128 (MQ=255) ccTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGc < 1:684650/128‑1 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑ccccccagac > 1:1402937/1‑91 (MQ=255) ttCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑ccccccagac < 2:1402937/96‑6 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCaaa < 2:736824/121‑1 (MQ=255) tCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCaaa > 1:736824/1‑121 (MQ=255) cGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa < 2:762017/139‑1 (MQ=255) cGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa < 2:110218/139‑1 (MQ=255) gTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa > 2:127507/1‑131 (MQ=255) gTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa < 1:127507/131‑1 (MQ=255) gTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTta < 1:1591758/139‑1 (MQ=255) cccTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATtca > 2:1550086/1‑89 (MQ=255) cccTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATtca < 1:1550086/89‑1 (MQ=255) ccTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTa > 2:1581358/1‑83 (MQ=255) ccTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTa < 1:1581358/83‑1 (MQ=255) ttCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACg > 1:975971/1‑76 (MQ=255) ttCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACg < 2:975971/76‑1 (MQ=255) ttCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCAt > 2:578206/1‑139 (MQ=255) ttCACGACTCAATGCGACAGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTACCAAATTA‑CGCTCCCAGACGAGGTAATTCATCAATAATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGACAt > 1:218277/1‑139 (MQ=255) cACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCatcaatca < 1:262572/91‑1 (MQ=255) cACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCatcaatca > 2:262572/1‑91 (MQ=255) gACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 1:164992/139‑1 (MQ=255) gACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 2:292130/139‑1 (MQ=255) gACCCAATGCTACCGCCTACCGCGCCAACACCGGTAAATA‑TGGATAGGATAGCAAATTACC‑CCCCCAGACGAAGTAACTCAACAAGCATTCCCAAATGGATCTATTATCTCTGTGACAAATTTATATCAGGGATTAGCa < 1:349968/139‑1 (MQ=255) cTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATc < 2:225841/139‑1 (MQ=255) tCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATcc > 2:550854/1‑139 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa < 1:1370992/111‑1 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTa > 2:1370992/1‑111 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa > 1:1548852/1‑134 (MQ=255) aaTGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 2:1548852/134‑1 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGtct > 2:503204/1‑139 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑ccccccaga < 1:1358788/62‑5 (MQ=255) tGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑c‑ccccccaga > 2:1358788/1‑58 (MQ=255) aCCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGc < 1:578206/139‑1 (MQ=255) ccGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAAt > 2:774916/1‑109 (MQ=255) ccGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAAt < 1:774916/109‑1 (MQ=255) ccGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCt < 2:371905/139‑1 (MQ=255) tcAAAGCCAGTAAATATTTGCT‑GGGTAGCAAATGACC‑CCCCCAGACGAGGTAATTTATCAAACGTTTCCAACAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCGCAATGAt < 1:12151/138‑1 (MQ=255) cAGTAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTa < 1:1374980/139‑1 (MQ=255) aGTAAATA‑TTGCTCGTGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTAGAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTAt < 2:747579/139‑1 (MQ=255) tAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATc < 2:1432745/94‑1 (MQ=255) tAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATc > 1:1432745/1‑94 (MQ=255) tAAATA‑TTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGCTAATTCATCCATCATTTCCAAAAGCAGCAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTg < 1:277371/139‑1 (MQ=255) a‑tTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGcaa > 2:1323664/1‑62 (MQ=255) a‑tTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGcaa < 1:1323664/62‑1 (MQ=255) a‑tTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGtct > 2:1159434/1‑107 (MQ=255) a‑tTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGtct < 1:1159434/107‑1 (MQ=255) a‑tTGCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGgtagt < 1:990471/139‑1 (MQ=255) gCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGc > 2:208185/1‑57 (MQ=255) gCTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGc < 1:208185/57‑1 (MQ=255) cTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGca < 1:1202701/57‑1 (MQ=255) cTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGca > 2:1202701/1‑57 (MQ=255) cTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTAc > 1:515284/1‑74 (MQ=255) cTCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTAc < 2:515284/74‑1 (MQ=255) tCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTa > 1:1602774/1‑92 (MQ=255) tCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTa < 2:1602774/92‑1 (MQ=255) tCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa > 1:1185026/1‑95 (MQ=255) tCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 2:1185026/95‑1 (MQ=255) tCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAcat > 1:619206/1‑139 (MQ=255) tCGGGTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAAcat > 1:543422/1‑139 (MQ=255) gTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 1:71497/91‑1 (MQ=255) gTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa > 2:71497/1‑91 (MQ=255) gTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt < 2:730720/115‑1 (MQ=255) gTAGCAAATTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGAt > 1:730720/1‑115 (MQ=255) aaaTTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa > 2:881845/1‑86 (MQ=255) aaaTTACC‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCa < 1:881845/86‑1 (MQ=255) | CGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATA‑TTGCTCGGGTAGCAAATTA‑C‑CCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACAT > NC_000913/2484756‑2485014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |