| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 572,454 | C→T | C29C (TGC→TGT) | ylcH → | uncharacterized protein, DLP12 prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 572,454 | 0 | C | T | 98.8% | 269.9 / NA | 84 | C29C (TGC→TGT) | ylcH | uncharacterized protein, DLP12 prophage |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (47/36); minor base G (1/0); total (48/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGA > NC_000913/572320‑572589 | ccGGAGCCTGAACAACTCGGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑g > 1:1018620/1‑139 (MQ=255) gAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGt < 2:1555101/139‑1 (MQ=255) acTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAAcc > 2:1609715/1‑139 (MQ=255) cTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACct > 1:1254951/1‑139 (MQ=255) cTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACct > 2:675619/1‑139 (MQ=255) cTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGa < 2:1254951/139‑1 (MQ=255) cgcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCAt > 2:1033411/1‑139 (MQ=255) ggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGaa > 2:1781597/1‑111 (MQ=255) ggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGaa < 1:1781597/111‑1 (MQ=255) ttATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGc < 2:518066/139‑1 (MQ=255) aTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGa > 2:597155/1‑107 (MQ=255) aTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGa < 1:597155/107‑1 (MQ=255) aTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCg > 1:1504188/1‑139 (MQ=255) aaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtcg > 2:1779767/1‑139 (MQ=255) aaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtcg > 2:1749053/1‑139 (MQ=255) aaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtcg > 1:991501/1‑139 (MQ=255) aCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtcgg < 2:991501/139‑1 (MQ=255) aCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtcgg < 2:1504188/139‑1 (MQ=255) ctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑ggg < 1:1733541/71‑1 (MQ=255) ctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑ggg > 2:1733541/1‑71 (MQ=255) cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCgg > 2:173298/1‑112 (MQ=255) cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCgg < 1:173298/112‑1 (MQ=255) cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAt > 1:220446/1‑139 (MQ=255) cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAt < 2:1018620/139‑1 (MQ=255) tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATcc > 2:21451/1‑139 (MQ=255) tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGc > 1:1801984/1‑109 (MQ=255) tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGc < 2:1801984/109‑1 (MQ=255) tccctCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGc > 2:802865/5‑139 (MQ=255) tCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTa > 2:1642380/1‑139 (MQ=255) tCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTa > 1:1616214/1‑139 (MQ=255) acaGATGCAGAGATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAt > 1:1064881/1‑116 (MQ=255) acaGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAt < 2:1064881/116‑1 (MQ=255) aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc > 1:797315/1‑132 (MQ=255) aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc < 2:797315/132‑1 (MQ=255) aTGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCCACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTgga > 2:1781809/1‑139 (MQ=255) aTGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGCTCGGCAGATCCAGCCTTATCTgga > 1:749333/1‑139 (MQ=255) tGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtcgg < 2:1092069/118‑1 (MQ=255) tGCAGAAATGCACCTGCAATTCTTTGCATCTACCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtcgg > 1:1092069/1‑118 (MQ=255) cAGAAATGCACCTGCAATTCTTTTCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc < 2:1107468/127‑1 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCa < 1:1278836/78‑1 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCa > 2:1278836/1‑78 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTa < 1:1636723/108‑1 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTa > 2:1636723/1‑108 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc < 1:1358508/127‑1 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc > 1:1107468/1‑127 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc > 2:1358508/1‑127 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTggagga > 2:101780/1‑139 (MQ=255) aaaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGAGGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGaggagg > 2:30986/1‑139 (MQ=255) aaaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCAc > 2:213666/1‑100 (MQ=255) aaaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCAc < 1:213666/100‑1 (MQ=255) gCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCaaa > 2:1823973/1‑139 (MQ=255) cACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAt < 1:1693891/113‑1 (MQ=255) cACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAt > 2:1693891/1‑113 (MQ=255) ccTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCa > 2:1512388/1‑68 (MQ=255) ccTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCa < 1:1512388/68‑1 (MQ=255) cTGCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCt > 1:700650/1‑139 (MQ=255) gCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCa > 2:332277/1‑65 (MQ=255) gCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCa < 1:332277/65‑1 (MQ=255) gCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCttt > 1:71029/1‑139 (MQ=255) gCAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCttt > 2:1074233/1‑139 (MQ=255) cAATTCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTc < 1:1609715/139‑1 (MQ=255) ttCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAAcc > 1:1083677/1‑46 (MQ=255) ttCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAAcc < 2:1083677/46‑1 (MQ=255) tCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGTAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCAt < 1:1749053/139‑1 (MQ=255) tCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCAt < 1:1074233/139‑1 (MQ=255) tCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCAt < 2:1396409/139‑1 (MQ=255) tCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCAt < 1:1033411/139‑1 (MQ=255) tCTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTGATCTGGAGGAGGGCAAATGCTTTCGCAt < 2:749333/139‑1 (MQ=255) cTTTGCATCTAGCGTTTGGCCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATg < 2:1616214/139‑1 (MQ=255) cTTTGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATg < 2:71029/139‑1 (MQ=255) ttGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAt > 2:964145/1‑100 (MQ=255) ttGCATCTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAt < 1:964145/100‑1 (MQ=255) cTAGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTaa > 1:473974/1‑139 (MQ=255) aGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATc > 2:951134/1‑93 (MQ=255) aGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATc < 1:951134/93‑1 (MQ=255) aGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc < 1:511777/98‑1 (MQ=255) aGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc > 2:511777/1‑98 (MQ=255) aGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTggag > 1:805002/1‑108 (MQ=255) aGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTggag < 2:805002/108‑1 (MQ=255) aGCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCAT‑GTGCTTAAAcc > 1:1717689/1‑139 (MQ=255) gCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATc < 1:1280396/92‑1 (MQ=255) gCGTTTGACCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATc > 2:1280396/1‑92 (MQ=255) aCCTCTGTGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGt > 1:1695751/1‑139 (MQ=255) ctGGGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGAAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTgaga > 1:1179041/1‑139 (MQ=255) | CCGGAGCCTGAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGA‑GGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGA > NC_000913/572320‑572589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |