| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,709,561 | (C)6→7 | coding (915/1692 nt) | eptB ← | KDO phosphoethanolamine transferase, Ca(2+)‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,709,555 | 1 | . | C | 95.2% | 209.3 / 2.4 | 62 | coding (921/1692 nt) | eptB | KDO phosphoethanolamine transferase, Ca(2+)‑inducible |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (30/29); total (31/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
AGCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑C‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATA > NC_000913/3709417‑3709684 | aGCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCcgcg < 2:419209/139‑1 (MQ=255)aGCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCcgcg < 2:1217845/139‑1 (MQ=255) ttgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccc > 2:806370/1‑138 (MQ=255) tgtCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccct < 1:251039/139‑3 (MQ=255) attcacaaTCGTGTTGCTGTATAACCTCATTTCGCTCTGCATAGGCTAGAGGTCAAAACTGAATCCTAACTGCTTCCGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCAGCGGATTATCTTCCGCG‑c‑cccccctg < 1:982296/132‑4 (MQ=255) cGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACg < 2:1097772/139‑1 (MQ=255) cGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACg < 1:206852/139‑1 (MQ=255) ccATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTC‑TTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTAc < 2:1149381/139‑1 (MQ=255) cATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTAc > 2:56250/1‑139 (MQ=255) cATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTAc > 1:1279019/1‑139 (MQ=255) tCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaa < 1:806370/139‑1 (MQ=255) gTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACg < 2:271187/139‑1 (MQ=255) tAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGc < 1:376150/139‑1 (MQ=255) gAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCTGCGCC‑CCCCCTGACGTACAAACATGCAACGCAg > 1:620637/1‑139 (MQ=255) gAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAg > 2:308089/1‑139 (MQ=255) gAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAg > 2:507558/1‑139 (MQ=255) aaCCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGt < 2:1199583/139‑1 (MQ=255) aaCCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGt < 1:945289/139‑1 (MQ=255) caTTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGagag > 2:1357383/1‑139 (MQ=255) tttCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCcgcg < 2:129456/101‑1 (MQ=255) tttCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCcgcg > 1:129456/1‑101 (MQ=255) tttCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAAc > 2:1265684/1‑127 (MQ=255) tttCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAAc < 1:1265684/127‑1 (MQ=255) tttCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑c < 2:1079555/103‑1 (MQ=255) tttCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑c > 1:1079555/1‑103 (MQ=255) ctGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGc < 2:794229/139‑1 (MQ=255) gCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg > 2:1063739/1‑98 (MQ=255) gCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg < 1:1063739/101‑4 (MQ=255) gCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc > 1:568694/1‑98 (MQ=255) gCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc < 2:568694/98‑1 (MQ=255) cATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGt > 1:332723/1‑139 (MQ=255) gCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑CTCCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATca < 1:83947/139‑1 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGc < 1:36679/126‑1 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGc > 2:36679/1‑126 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAg > 1:377597/1‑139 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg < 2:1154652/90‑4 (MQ=255) agGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg > 1:1154652/1‑87 (MQ=255) agGCCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTACCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAg > 1:879615/1‑139 (MQ=255) cAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATca > 1:443335/1‑129 (MQ=255) cAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATca < 2:443335/129‑1 (MQ=255) aGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc > 2:765448/1‑82 (MQ=255) aGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc < 1:765448/82‑1 (MQ=255) tGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGa > 2:826383/1‑139 (MQ=255) aaTCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAAc > 2:1141041/1‑139 (MQ=255) aaTCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAAc > 1:917832/1‑139 (MQ=255) aaTCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAAc > 1:828648/1‑139 (MQ=255) aCTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCa > 2:286957/1‑139 (MQ=255) gCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaa < 2:219621/76‑1 (MQ=255) gCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaa > 1:219621/1‑76 (MQ=255) ttCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGAttt > 2:675221/1‑139 (MQ=255) ttCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg < 1:1160880/66‑4 (MQ=255) ttCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg > 2:1160880/1‑63 (MQ=255) tCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGAtttt > 2:190689/1‑139 (MQ=255) cAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaa < 2:1136234/72‑1 (MQ=255) cAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACaa > 1:1136234/1‑72 (MQ=255) aCCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTcc < 2:1279019/139‑1 (MQ=255) ccGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCt < 2:879615/139‑1 (MQ=255) ccGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg < 2:1205763/59‑4 (MQ=255) ccGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg > 1:1205763/1‑56 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc > 1:648849/1‑53 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑c‑ccccc < 2:648849/53‑1 (MQ=255) cgAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTCCCGTGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTggg > 1:507850/1‑139 (MQ=255) gAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGc < 1:675221/139‑1 (MQ=255) gttctTTTAATGTGCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg < 2:377597/139‑1 (MQ=255) gttctTTTAATGTGCGCTGCGGATTATCTCCCGTGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCg < 2:507850/139‑1 (MQ=255) ttctTTTAATGTGCGCTGCGGATTATCTTCCGCG‑C‑CCCCCTGACGTACaa > 1:1061625/1‑50 (MQ=255) ttctTTTAATGTGCGCTGCGGATTATCTTCCGCG‑C‑CCCCCTGACGTACaa < 2:1061625/50‑1 (MQ=255) ttAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg < 2:1243054/38‑4 (MQ=255) ttAATGTGCGCTGCGGATTATCTTCCGCG‑c‑cccccctg > 1:1243054/1‑35 (MQ=255) aTGTGTGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGGGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTTTCCTGGGCCAGTTTCGGCGTGGTATTAc < 2:848162/139‑1 (MQ=255) gtgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCaa < 1:614704/49‑1 (MQ=255) gtgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCaa > 2:614704/1‑49 (MQ=255) gtgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGttt < 1:363005/123‑1 (MQ=255) gtgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGttt > 2:363005/1‑123 (MQ=255) tgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGtt > 1:796659/1‑66 (MQ=255) tgCGCTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGtt < 2:796659/66‑1 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACg < 1:1198582/48‑1 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACg > 2:1198582/1‑48 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGAttt > 2:651966/1‑103 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGAttt < 1:651966/103‑1 (MQ=255) cgcTGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCa > 1:341952/1‑139 (MQ=255) tGCGGATTATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAg < 1:1357383/139‑1 (MQ=255) ttATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGaaa < 1:826383/139‑1 (MQ=255) tATCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGaaaa > 1:174805/1‑139 (MQ=255) tCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCa < 1:1348826/38‑1 (MQ=255) tCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCa > 2:1348826/1‑38 (MQ=255) tCTTCCGCGCC‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATa < 2:828648/139‑1 (MQ=255) | AGCAATGTTGTCCGCCATCGTGTTGCTGTAGAACCACATTTCGCTCTGCATAGCGTAGAGGTCAGAACTGAATCCTAACTGCTTCAGAACCGCGAAAATGTTCTGTTCTTTTAATGTGCGCTGCGGATTATCTTCCGCG‑C‑CCCCCTGACGTACAAACATGCAACGCAGTGAGAGTTTGGTTGCGGTATCACAGGAGTAACCACGGAACGCCGCCAGATTTTTCTCCTGGGCCAGTTTCGGCGTGGTATTACGCTCATAGCCGAAAATA > NC_000913/3709417‑3709684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |