| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4551364 = | 80 (1.140) | 4 (0.060) | 3/256 | NT | 5.6% | coding (1129/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter |
| ? | CP009273 | 4551429 = | 60 (0.900) | coding (1064/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter | |||||
TGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTAAAAGATTGAGATTTCCCGG > CP009273/4551216‑4551511 | gttttggcggtacctttatgggcacgacatctctggtgatgactatcgcccgccaactgagcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgctc > 1:743542‑M1/149‑149 (MQ=255) ggCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCgca < 1:140142/149‑1 (MQ=255) tttggaggtacctttatgggcacgacatctctggtgatgactatcgcccgccaactgagcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgctCAg > 1:495595‑M1/147‑149 (MQ=255) ttggcggtacctttatgggcacgacatctctggtgatgactatcgcccgccaactgagcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgctCAGc < 1:410453‑M1/4‑1 (MQ=255) aaCGATGCCTCCCTTTCTGTCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAgcgc < 2:142533/143‑1 (MQ=255) aCGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATa < 1:1206952/149‑1 (MQ=255) gtacctttatgggcacgacatctctggtgatgactatcgcccgccaactgagcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgctCAGc < 2:753756‑M1/4‑1 (MQ=255) tttatgggcacgacatctctggtgatgactatcgcccgccaactgagcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgcgCCGCAATa‑a < 2:580008‑M1/9‑1 (MQ=255) cTCCCTTTCTGGCAAGCGAAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACGACTTGTAGCTTAAATAATTGCACTGTGCTGATACGAGCCGCAATa‑a > 2:729385/1‑143 (MQ=255) tCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGCCCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAAcga > 1:1177056/1‑148 (MQ=255) tCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AAAAAcgc > 1:643828/1‑149 (MQ=255) cccTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCACTA‑AACAAcgcc > 1:517291/1‑149 (MQ=255) cccTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAAcgcc > 1:107974/1‑149 (MQ=255) ccTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATa‑aaaa > 2:846318/1‑141 (MQ=255) cTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCCACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAAcgccgc > 1:826987/1‑149 (MQ=255) gcacgacatctctggtgatgactatcgcccgccaactgagcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttaaggcattgggcaaatactcggcccggcgctgcccagtatgcgaagcaacagaacgtcg < 2:825598‑M1/16‑11 (MQ=255) tGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAAcgccg > 2:297397/1‑143 (MQ=255) tGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAAcgccg > 2:588766/1‑143 (MQ=255) gCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCaga > 1:1122843/1‑149 (MQ=255) gCGGAAAACGGGGTCTGGCTGACATCAACGGTTGAGGGTGTGTTGCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AGCAACGCcgc‑‑‑‑cgcgc > 2:1106182/1‑143 (MQ=255) gCGGAAAACGGGGACTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGAGGTAAGGTGAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCACAAATA‑AACAACGCcgc‑‑‑‑cgcgc > 2:347792/1‑143 (MQ=255) ggAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAAGTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCAAAGTGCTAGAAAGCGCGGCACGA‑AACAACGCCgc‑‑‑‑cgcgccgccgcga > 1:884394/1‑144 (MQ=255) gAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGCTAAGCGCAGCAATA‑AACAACGCCgc‑‑‑‑cgcgccgc > 2:909652/1‑143 (MQ=255) gAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCgc‑‑‑‑cgtgccgc < 2:928094/143‑1 (MQ=255) aaaCGGGGTCTGGCGGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTg < 1:70373/149‑1 (MQ=255) aCGGGGTCTGGCTGACATCAACGGTGGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTGAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGgc > 1:729636/1‑149 (MQ=255) cGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGgcg < 1:1039949/149‑1 (MQ=255) ggTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGACGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTg > 1:1278724/1‑149 (MQ=255) ggTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTg < 2:369715/143‑1 (MQ=255) gTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTgg < 2:1061257/143‑1 (MQ=255) cTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGgcg < 2:96040/143‑1 (MQ=255) cgcccgccacctgagcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgctCAGCAATGGAACATCGGCGCTTGCCGCGCCGCAGAGAGTGGCGCTgg > 1:1094710‑M1/103‑149 (MQ=255) cTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAGGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATACTTGCACTCGGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTgg < 2:1045361/143‑1 (MQ=255) cTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGCCCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGAAATA‑AACCACGCCGC‑‑‑‑CGCGCCGCGGAGAGCGGCACTGGCAAgcg > 1:1023168/1‑149 (MQ=255) cTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGGGAGTGGCGCTGGCAAgcg > 1:6695/1‑149 (MQ=255) aCATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCaa > 2:482792/1‑143 (MQ=255) cATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTTGCCAGCGccac < 1:861242/149‑3 (MQ=255) aaCGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATCAGCGGTCCATGT‑AACAAGGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGtt > 1:1009628/1‑149 (MQ=255) aCGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTc < 1:707389/149‑1 (MQ=255) aCGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCAATGTGCTGATAAACGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCg > 2:354204/1‑143 (MQ=255) gttgcggttgAGTCTCTTGAGTGGGAAGGGAACCTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGAAGTTCCAt < 1:253827/149‑1 (MQ=255) agcgtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcatatcctcggcccggcgctgaccagtatgctCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCAt > 1:676601‑M1/90‑149 (MQ=255) ttgcggttgAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCAtt > 1:663417/1‑149 (MQ=255) tgcggttgAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTg < 1:562762/149‑1 (MQ=255) gtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgctCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGATTGGCGCTGGCAAGCGCCGATGTTCCATTGc > 1:675525‑M1/87‑149 (MQ=255) gtaccgggaaatctcaatcttttaggctttgtgacgctcatttacggcattgggcaaatcctcggcccggcgctgaccagtatgctCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGc > 1:1061513‑M1/87‑149 (MQ=255) gcggttgAGTTGCTTGAGTGGTAAGGGAACCTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTc < 2:664194/143‑1 (MQ=255) gttgAGTTTCTTGGGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCAt < 2:787502/143‑1 (MQ=255) gttgAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCAt > 2:205268/1‑143 (MQ=255) ttgAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAg < 1:994254/149‑1 (MQ=255) gAGTTTCTTGAGTGGTAAGGGAACCTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCa < 1:878680/149‑1 (MQ=255) gTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTg > 2:947417/1‑143 (MQ=255) tttCTTGTGTGGTAAGGGATACTTCCCTCATGTTGTGACCACTTGTAGCTTAAATATTTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATAc < 1:115968/149‑1 (MQ=255) tttCTTGGGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGa < 2:545837/143‑1 (MQ=255) tttCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGa < 2:1141981/143‑1 (MQ=255) tttCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATAc < 1:1047860/149‑1 (MQ=255) gAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGGAAGCGCCGATGTTCCATTGCTGAGCATGCTGGTCa > 1:535264/1‑149 (MQ=255) gAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCa > 1:1277209/1‑149 (MQ=255) gTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACACCGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTc < 2:802988/143‑1 (MQ=255) gTAAGGGAAACGTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTc < 2:329584/143‑1 (MQ=255) aGGGACACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCGCTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCggg < 1:1207955/149‑1 (MQ=255) gggAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGc > 1:1290627/1‑149 (MQ=255) gggAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGc > 1:1294204/1‑149 (MQ=255) aCTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCATAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCggg < 2:276251/143‑1 (MQ=255) aCTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGTCggg < 2:414329/143‑1 (MQ=255) cTTCCCTCATGAAGTGACCACTTGTAGCTGAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGCGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGa < 1:1155913/149‑1 (MQ=255) tCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGGGGAtt > 1:327903/1‑149 (MQ=255) cTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGGGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGc < 1:396018/149‑1 (MQ=255) aTGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGGGGGtt > 2:698139/1‑143 (MQ=255) aCCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCACGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCCCCGGGCCGAGGACTT‑CCCaact > 2:97243/1‑141 (MQ=255) aCCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGGGCATACTGGTCCGCGCCGGGCCGAGGATTTGCCCAAt > 2:321879/1‑143 (MQ=255) cTTGTAGCTTAAATAATTGCACTTTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATg < 1:47093/149‑1 (MQ=255) cTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCAAGGATTTGCCCAATGCCGTAAATg < 1:966487/149‑1 (MQ=255) cTTGTAGCTTAAATAAGTGCACTCTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCg < 2:716912/143‑1 (MQ=255) tAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGc < 2:306197/143‑1 (MQ=255) aaaTAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACaa > 1:1209256/1‑149 (MQ=255) ataatTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAg < 1:89868/149‑1 (MQ=255) atTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGCTGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGGCACAAAGCCt > 1:587084/1‑149 (MQ=255) tGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGCTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACaaa > 2:664103/1‑143 (MQ=255) gcccTGTGTTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAg < 2:8029/140‑1 (MQ=255) gCACTGGGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCACGGGCCGCTGTGCCGTTCTGGATCATACTTGCAAGGTTATTTGCGAGGATTTGCCCGCTGCCCTAAATGAGCGTCACAAAg < 2:801378/143‑1 (MQ=255) cACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGCTGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTaaaa < 1:503238/149‑1 (MQ=255) cACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGATCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTaaaa < 1:118110/149‑1 (MQ=255) cACTGGGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTaaaa < 1:602232/149‑1 (MQ=255) tgtgCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTACATGAGCGTCCCAAAGCCtg > 2:599796/1‑142 (MQ=255) gtgCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGAGGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGGCACAAAGCCTaa > 2:618301/1‑143 (MQ=255) gtgCTGAGAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTAAAAGAtt < 1:59983/149‑1 (MQ=255) tgCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTaaa < 2:1090975/143‑1 (MQ=255) tGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGGGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGAGTCAAAAAGCCTAAAGGATTgcga > 1:1229213/1‑149 (MQ=255) tGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCGGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCGATGCCGTAAATGAGCGTCACAAAGCCTAAAAGa > 2:969464/1‑143 (MQ=255) gATAAGCGCGGCAATA‑AACACCGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTAAAAGAt < 2:886857/143‑1 (MQ=255) gATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATAAGCGCCACAAAGCCTAAAAGATTGAGAt > 1:220440/1‑149 (MQ=255) aaGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTCCTGAGCATACAGGTCAGCGCCGGGCCCAGGATTTGCCCAACGCCGTAAATGAGCGCCACAAAGCCTAAAAGacaga > 2:478566/1‑139 (MQ=255) gcagcaATA‑AACAACGCCGC‑‑‑‑CGCGCCGCATAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGATGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGACTAAAAGATTGAGATTTCCCgg > 1:824990/1‑149 (MQ=255) | TGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATA‑AACAACGCCGC‑‑‑‑CGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATTGCTGAGCATACTGGTCAGCGCCGGGCCGAGGATTTGCCCAATGCCGTAAATGAGCGTCACAAAGCCTAAAAGATTGAGATTTCCCGG > CP009273/4551216‑4551511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |