| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2722802 = | 69 (0.650) | 4 (0.070) +AGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAA |
3/162 | 11.1 | 7.4% | noncoding (2/76 nt) | gltW | tRNA‑Glu |
| ? | CP009273 | = 4199681 | 113 (1.070) | intergenic (+65/‑21) | rrsE/gltV | 16S ribosomal RNA of rrnE operon/tRNA‑Glu | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGA > CP009273/2722659‑2722948 | tatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGa > 2:113220/1‑149 (MQ=255) tCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGTAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGaaa > 2:190373/1‑149 (MQ=255) tCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGCCGAAGGGGACACg > 1:1404759/1‑146 (MQ=255) aaacagactgttaaGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGGGTCCTGGGCCTCTAGCCCAAGGGGACACGaaa > 1:1353280/14‑146 (MQ=11) aaCAGGACTTAACAGTCTGTTTTGAGATATTGAGGGCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGaaa < 1:137351/146‑1 (MQ=255) aaCAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGaaa > 1:1271796/1‑146 (MQ=255) aaCAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGaaa > 1:1283229/1‑146 (MQ=255) aaCAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCACCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACCaaa > 1:990388/1‑146 (MQ=255) aCAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGCCGAAGGGGGCACGCAAATTg > 2:1044089/1‑149 (MQ=255) aCAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACAAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGCCGGTGTCCTGGGCCTCTAGACGCACGGGACACGaaaa > 1:1067495/1‑146 (MQ=255) cAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGGCACGAAAATTGc > 2:1460942/1‑149 (MQ=255) cagccTTACCAGTCTGTTTGGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAAtt < 1:547044/142‑1 (MQ=255) aGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCtt < 2:382604/149‑1 (MQ=255) gACTTAACAGTTCGGTTGGAGATATTGAGGTCGGTTGCTTTCACGCACAAGCCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGGTACCGCCGTGAAAGGGCGGTGGCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGc < 1:577853/146‑1 (MQ=11) aCTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCGAGACGAAGGGGACACGAAAATTGCt > 1:474923/1‑146 (MQ=255) ttAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCa > 2:1772565/1‑149 (MQ=40) aGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGAGGAAGGGGGCACGAAAATTTCTTTTCCcg > 1:1044060/1‑146 (MQ=11) gTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGTCACGAAAATTGCTTATCACGCGtt < 2:1321523/149‑1 (MQ=25) ttGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTAACACGCGTTGCGTGat > 2:45503/1‑149 (MQ=17) tGAGATATTGAGGTCGGCGACTTTCACTCACAAACCATCAAGTG‑GCGTCCCCTAGGGGATTCCAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGata < 2:1205499/149‑1 (MQ=17) tGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCAcgcaacgcgtg < 1:48814/146‑9 (MQ=12) tGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGata > 2:598361/1‑149 (MQ=32) gagaTTTTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGa < 1:1524768/146‑1 (MQ=17) gagaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGCGa < 1:1524170/146‑1 (MQ=17) gagaTATTGAGGTCGGCGACTATCACTCACAAACCAGCACGTGAGCG‑CGCCTCAGGGCTACAAAGCACATCAACGACCGATAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTggctga > 1:1160265/1‑141 (MQ=2) gagaTAGTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCAACGCGTGataa < 2:1412067/149‑2 (MQ=11) agaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATAtt > 2:526776/1‑149 (MQ=32) agaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGAGAtt > 2:843230/1‑149 (MQ=17) gaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGata > 1:613258/1‑146 (MQ=32) gaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGATCACGTGTTCATGTCGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATAttt > 2:51628/1‑149 (MQ=11) tatTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTc < 2:1332352/149‑1 (MQ=32) tatTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTc > 2:1095437/1‑149 (MQ=32) tatTGAGGTCGGCGACTTTAACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTc > 2:1290412/1‑149 (MQ=17) atTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGGAGGGGACACGAAAATTGCTTATCACGCGTTGCGGGATAttt > 1:621383/1‑146 (MQ=17) ttGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCgt < 2:1608851/149‑1 (MQ=32) ttGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCgt < 2:977525/149‑1 (MQ=32) tGAGGTCGGCGGCTTTCCCTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTc < 1:189965/146‑1 (MQ=14) aaGGTCGGCGACTTTCCCTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCAACGCGTGataagcaatttt < 2:326036/148‑10 (MQ=11) tcccaAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCAGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTaa < 2:516794/146‑1 (MQ=1) ctgggggATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTAtt < 1:399462/143‑1 (MQ=1) ttcaatcccTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTTCTTATCACGCTTTGCCTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGc < 1:8549/140‑1 (MQ=1) ggtcGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAAATGCTTATCACGCGTAGCGCGATCTTTACGTGTAGGGTGACCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCt < 2:517071/146‑1 (MQ=1) ggCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGCTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCACACTCCCACCGCGTAAACGCCTTGCTa > 2:1012937/1‑149 (MQ=2) cGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAGACGCCGTGCTAtt > 2:1367607/1‑149 (MQ=17) cGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAtt < 2:670656/149‑1 (MQ=32) cGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAtt > 2:486944/1‑149 (MQ=32) tgtCCTGGGCCTCCAGACGAAGAGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAtt < 1:174998/146‑1 (MQ=17) tgcccTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAtt < 1:637188/143‑1 (MQ=17) tGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtt < 1:650186/146‑1 (MQ=32) tGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtc < 2:318961/149‑1 (MQ=34) ggggCCTCTCGACTAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtt < 1:1656534/145‑1 (MQ=17) gCCTCTAGACGAAGGGGACACGAAACTTGCTTATCACGCGTGGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACTCGTAAACGCCTTGCTATTCACTTTtcatc < 2:1079801/149‑1 (MQ=255) ccttcaGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtca < 1:1009278/141‑1 (MQ=21) ctctATAGGAAGGGGAGACGAAAATTGCTTATCTCGCGTTGCGTGATATTTTCGTGTAGTGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcat < 1:220799/146‑1 (MQ=11) ctctAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAg > 2:563682/1‑149 (MQ=38) tctAGACGAAGGGGACACGAAAATAGCTTATCACGCGTTGCGTGATAACTTCGTGTAGGGTGCGATTTCATTAATAGAAAGAGAACGGTCTTATTTTACTCAGACTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcatc > 1:427824/1‑146 (MQ=11) ctAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcctcg > 1:1528926/1‑145 (MQ=18) tAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTTGTTTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACa > 2:351699/1‑149 (MQ=255) tAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCATCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcatcgcaca > 2:27827/1‑144 (MQ=255) gACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAAt < 2:1688776/149‑1 (MQ=39) cGAAGGGGACACGAAAATTGCCTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTTCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCt < 2:1132149/149‑1 (MQ=255) gAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATACGACAATCtg > 2:442778/1‑149 (MQ=255) aGGTGAGACAAAAATTGCTTATCACTGGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtg < 2:834740/149‑1 (MQ=11) gggACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgt > 1:669737/1‑146 (MQ=38) gggACACGAAAATTGCTTATCACGCGTTGCGTGATAGTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgt < 1:831611/146‑1 (MQ=255) ggACACGAAAATTGCTTATCACGTGTTGCGTGATATGTTCGTGTAGGGTGCGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGa < 2:681422/149‑1 (MQ=255) gACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgt < 1:60813/146‑1 (MQ=38) gACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgt < 1:549404/146‑1 (MQ=39) gACACGAAAATTGCTTATCACGCGTTGCGTGATAGTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAAGCtgtgt < 1:1345000/146‑1 (MQ=255) | TATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTG‑GCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGA > CP009273/2722659‑2722948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |